please command for groupworksfatcat

1 files changed, 63 insertions, 0 deletions

diff --git a/please b/please
index bf621bf..cc2a6ad 100755
--- a/please
+++ b/please
@@ -213,6 +213,38 @@ def run_matchcrossref(args):
             crossref_input=args.crossref_input)
     subprocess.call(cmd, shell=True)
 
+def run_groupworks(args):
+    if args.rebuild:
+        rebuild_scalding()
+    print("Starting groupworks job...")
+    output = "{}/output-{}/{}-groupworks".format(
+        HDFS_DIR,
+        args.env,
+        datetime.strftime(datetime.now(), "%Y-%m-%d-%H%M.%S"))
+    jobclass = "GroupFatcatWorksJob"
+    cmd = """hadoop jar \
+        scalding/target/scala-2.11/sandcrawler-assembly-0.2.0-SNAPSHOT.jar \
+        com.twitter.scalding.Tool \
+        -Dmapred.reduce.tasks={reducers} \
+        -Dcascading.spill.list.threshold=500000 \
+        -Dmapred.output.compress=false \
+        -Dmapred.compress.map.output=true \
+        -Dmapred.task.timeout=3600000 \
+        sandcrawler.{jobclass} \
+        --hdfs \
+        --app.conf.path scalding/ia_cluster.conf \
+        --hbase-table wbgrp-journal-extract-0-{env} \
+        --zookeeper-hosts {zookeeper_hosts} \
+        --fatcat-release-input {fatcat_release_input} \
+        --output {output}""".format(
+            output=output,
+            jobclass=jobclass,
+            zookeeper_hosts=ZOOKEEPER_HOSTS,
+            env=args.env,
+            reducers=args.reducers,
+            fatcat_release_input=args.fatcat_release_input)
+    subprocess.call(cmd, shell=True)
+
 def run_grobidscorabledump(args):
     if args.rebuild:
         rebuild_scalding()
@@ -360,6 +392,22 @@ def run_matchbenchmark(args):
             right_bibjson=args.right_bibjson)
     subprocess.call(cmd, shell=True)
 
+def run_groupworksbenchmark(args):
+    if args.rebuild:
+        rebuild_scalding()
+    print("Starting groupworksbenchmark job...")
+    cmd = """./pig/deps/hadoop/bin/hadoop jar \
+        scalding/target/scala-2.11/sandcrawler-assembly-0.2.0-SNAPSHOT.jar \
+        com.twitter.scalding.Tool \
+        sandcrawler.GroupFatcatWorksJob \
+        --local \
+        --app.conf.path scalding/ia_cluster.conf \
+        --fatcat-release-input {fatcat_releases} \
+        --output {output}""".format(
+            output=args.output,
+            fatcat_releases=args.fatcat_releases)
+    subprocess.call(cmd, shell=True)
+
 def run_keysmissingcol(args):
     if args.rebuild:
         rebuild_scalding()
@@ -454,6 +502,14 @@ def main():
         help="whether to include CDX and other metadata in output",
         action='store_true')
 
+    sub_groupworks = subparsers.add_parser('groupworks-fatcat')
+    sub_groupworks.set_defaults(func=run_groupworks)
+    sub_groupworks.add_argument('fatcat_release_input',
+        help="full HDFS path of fatcat release JSON dump")
+    sub_groupworks.add_argument('--reducers',
+        help="number of reducers to run",
+        type=int, default=200)
+
     sub_grobidscorabledump = subparsers.add_parser('grobid-scorable-dump')
     sub_grobidscorabledump.set_defaults(func=run_grobidscorabledump)
 
@@ -483,6 +539,13 @@ def main():
     sub_matchbenchmark.add_argument('output',
         help="where to write output")
 
+    sub_groupworksbenchmark = subparsers.add_parser('groupworks-benchmark')
+    sub_groupworksbenchmark.set_defaults(func=run_groupworksbenchmark)
+    sub_groupworksbenchmark.add_argument('fatcat_releases',
+        help="fatcat releases json file")
+    sub_groupworksbenchmark.add_argument('output',
+        help="where to write output")
+
     sub_keysmissingcol = subparsers.add_parser('keys-missing-col')
     sub_keysmissingcol.set_defaults(func=run_keysmissingcol)
     sub_keysmissingcol.add_argument('column',