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authorMartin Czygan <martin.czygan@gmail.com>2021-05-27 16:13:47 +0200
committerMartin Czygan <martin.czygan@gmail.com>2021-05-27 16:13:47 +0200
commiteb9d9205a2d8b83bdcb50b63e98b5c90fbb94c6c (patch)
treea916b334a2156fa7def353f5edb40345a4b46acf /python
parent647c570a813767d237e379ae35779f79e8e79198 (diff)
downloadrefcat-eb9d9205a2d8b83bdcb50b63e98b5c90fbb94c6c.tar.gz
refcat-eb9d9205a2d8b83bdcb50b63e98b5c90fbb94c6c.zip
tasks: convert ref to release schema
Diffstat (limited to 'python')
-rw-r--r--python/refcat/tasks.py1
1 files changed, 1 insertions, 0 deletions
diff --git a/python/refcat/tasks.py b/python/refcat/tasks.py
index a67e430..a471b1e 100644
--- a/python/refcat/tasks.py
+++ b/python/refcat/tasks.py
@@ -803,6 +803,7 @@ class UnmatchedMapped(Refcat):
def run(self):
output = shellout("""
zstdcat -T0 {input} |
+ skate-conf -f ref |
skate-map -m cns -skip-on-empty 1 |
LC_ALL=C sort -T {tmpdir} -S25% -k1,1 --parallel 4 |
zstd -T0 -c > {output}