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* fileset: refactor out tables of helpersBryan Newbold2021-10-273-21/+19
| | | | | | | Having these objects invoked in tables resulted in a whole bunch of objects (including children) getting initialized, which seems like the wrong thing to do. Defer this until the actual ingest fileset worker is initialized.
* fix type annotations for petabox body fetch helperBryan Newbold2021-10-265-8/+11
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* small type annotation hackBryan Newbold2021-10-261-1/+1
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* fileset: fix field renaming bug (caught by mypy)Bryan Newbold2021-10-261-2/+2
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* fileset ingest: fix table name typo (via mypy)Bryan Newbold2021-10-261-1/+1
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* update 'XXX' notes from fileset ingest developmentBryan Newbold2021-10-262-9/+6
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* bugfix: setting html_biblio on ingest resultsBryan Newbold2021-10-262-2/+2
| | | | This was caught during lint cleanup
* lint collection membership (last lint for now)Bryan Newbold2021-10-267-32/+32
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* commit updated flake8 lint configurationBryan Newbold2021-10-261-6/+10
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* ingest fileset: fix silly import typoBryan Newbold2021-10-261-1/+1
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* type annotations for persist workers; required some workBryan Newbold2021-10-261-66/+59
| | | | | Had to re-structure and filter things a bit, Should be better behavior, but might be some small changes.
* ingest file HTTP API: fixes from type checkingBryan Newbold2021-10-261-3/+3
| | | | | This code is deprecated and should be removed anyways, but still interesting to see the fixes
* more progress on type annotationsBryan Newbold2021-10-268-34/+55
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* grobid: fix a bug with consolidate_mode header, exposed by type annotationsBryan Newbold2021-10-261-1/+2
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* grobid: type annotationsBryan Newbold2021-10-261-9/+19
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* type annotations on SandcrawlerWorkerBryan Newbold2021-10-261-46/+57
| | | | | These annoations have a broad impact! Being conservative to start: Any-to-Any for process(), etc.
* more progress on type annotations and lintingBryan Newbold2021-10-2611-55/+87
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* live tests: FTP wayback replay now returns 200, not 226Bryan Newbold2021-10-261-2/+2
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* ia: more tweaks to delicate code to satisfy type checkerBryan Newbold2021-10-261-10/+12
| | | | | Ran the 'live' wayback tests after this commit as a check, and worked (once FTP status code behavior change is fixed)
* ia helpers: enforce max_redirects count correctlyBryan Newbold2021-10-261-1/+1
| | | | | AKA, should run fetch even if max_redirects = 0; the first loop iteration is not a redirect.
* set CDX request params are str, not int or datetimeBryan Newbold2021-10-261-3/+6
| | | | This might be a bugfix, changing CDX lookup behavior?
* bugfix: was setting 'from' parameter as a tuple, not a stringBryan Newbold2021-10-261-1/+1
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* start type annotating IA helper codeBryan Newbold2021-10-261-37/+65
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* start adding python type annotations to db and persist codeBryan Newbold2021-10-262-97/+124
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* Makefile: don't fail on isort error (consider these minor)Bryan Newbold2021-10-261-1/+1
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* tweak flake8 configBryan Newbold2021-10-261-2/+11
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* flake8 clean (with current settings)Bryan Newbold2021-10-269-25/+24
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* pipenv: import type annotations for requests and dateparserBryan Newbold2021-10-262-1/+19
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* start handling trivial lint cleanups: unused imports, 'is None', etcBryan Newbold2021-10-2630-149/+86
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* make fmtBryan Newbold2021-10-2659-1225/+1582
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* tweak lint/fmt settingsBryan Newbold2021-10-262-4/+6
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* update pytest warning filters (they are pretty expansive)Bryan Newbold2021-10-261-0/+3
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* ingest_html: update trafilatura TEI-XML output kwargBryan Newbold2021-10-261-1/+1
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* python: isort all importsBryan Newbold2021-10-2657-178/+207
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* add pyproject.toml (for isort and yapf config), and update 'lint' and 'fmt' ↵Bryan Newbold2021-10-262-3/+13
| | | | make targets
* pipenv: general update; add isort, yapf (over black), grobid_tei_xmlBryan Newbold2021-10-262-730/+880
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* more small fileset ingest tweaksBryan Newbold2021-10-262-6/+21
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* python: more aggressive gitignoreBryan Newbold2021-10-151-0/+3
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* persist support for ingest platform table, using existing persist workerBryan Newbold2021-10-152-2/+129
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* improve fileset ingest integration with file ingestBryan Newbold2021-10-154-5/+25
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* more fileset iterationBryan Newbold2021-10-155-45/+81
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* move SPNv2 'simple_get' logic to SPN clientBryan Newbold2021-10-153-52/+31
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* filesets: iteration of implementation and docsBryan Newbold2021-10-154-82/+148
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* fileset ingest: improve platform parsingBryan Newbold2021-10-151-12/+196
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* fileset ingest: improve error handlingBryan Newbold2021-10-154-48/+106
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* initial implementation of zenodo platform importBryan Newbold2021-10-151-0/+100
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* initial figshare platform helperBryan Newbold2021-10-151-0/+95
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* improvements to platform helpersBryan Newbold2021-10-153-34/+44
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* component ingest support for dataverse files (individual)Bryan Newbold2021-10-152-13/+31
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* progress on web ingest strategyBryan Newbold2021-10-153-12/+121
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