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* grobid petabox: fix fetch body/contentBryan Newbold2020-02-031-1/+1
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* more SQL commandsBryan Newbold2020-02-021-0/+15
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* wayback: try to resolve HTTPException due to many HTTP headersBryan Newbold2020-02-021-1/+9
| | | | | | | | | This is withing GWB wayback code. Trying two things: - bump default max headers from 100 to 1000 in the (global?) http.client module itself. I didn't think through whether we would expect this to actually work - catch the exception, record it, move on
* sandcrawler_worker: ingest worker distinct consumer groupsBryan Newbold2020-01-291-1/+3
| | | | | | I'm in the process of resetting these consumer groups, so might as well take the opportunity to split by topic and use the new canonical naming format.
* 2020q1 fulltext ingest plansBryan Newbold2020-01-291-0/+272
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* grobid worker: catch PetaboxError alsoBryan Newbold2020-01-281-2/+2
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* worker kafka setting tweaksBryan Newbold2020-01-281-2/+4
| | | | These are all attempts to get kafka workers operating more smoothly.
* make grobid-extract worker batch size 1Bryan Newbold2020-01-281-0/+1
| | | | | This is part of attempts to fix Kafka errors that look like they might be timeouts.
* sql stats: typo fixBryan Newbold2020-01-281-1/+1
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* sql howto: database dumpsBryan Newbold2020-01-281-0/+7
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* workers: yes, poll is necessaryBryan Newbold2020-01-281-1/+1
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* grobid worker: always set a key in responseBryan Newbold2020-01-281-4/+25
| | | | | | | | | We have key-based compaction enabled for the GROBID output topic. This means it is an error to public to that topic without a key set. Hopefully this change will end these errors, which look like: KafkaError{code=INVALID_MSG,val=2,str="Broker: Invalid message"}
* fix kafka worker partition-specific errorBryan Newbold2020-01-281-1/+1
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* fix WaybackError exception formatingBryan Newbold2020-01-281-1/+1
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* fix elif syntax errorBryan Newbold2020-01-281-1/+1
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* block springer page-one domainBryan Newbold2020-01-281-0/+3
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* clarify petabox fetch behaviorBryan Newbold2020-01-281-3/+6
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* re-enable figshare and zenodo crawlingBryan Newbold2020-01-211-8/+0
| | | | For daily imports
* persist grobid: actually, status_code is requiredBryan Newbold2020-01-212-3/+10
| | | | | | | Instead of working around when missing, force it to exist but skip in database insert section. Disk mode still needs to check if blank.
* ingest: check for null-body before file_metaBryan Newbold2020-01-211-0/+3
| | | | | gen_file_metadata raises an assert error if body is None (or false-y in general)
* wayback: replay redirects have X-Archive-Redirect-ReasonBryan Newbold2020-01-211-2/+4
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* persist: work around GROBID timeouts with no status_codeBryan Newbold2020-01-212-3/+3
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* grobid: fix error_msg typo; set status_code for timeoutsBryan Newbold2020-01-211-1/+2
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* add 200 second timeout to GROBID requestsBryan Newbold2020-01-171-8/+15
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* add SKIP log line for skip-url-blocklist pathBryan Newbold2020-01-171-0/+1
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* ingest: add URL blocklist featureBryan Newbold2020-01-172-4/+49
| | | | And, temporarily, block zenodo and figshare.
* handle UnicodeDecodeError in the other GET instanceBryan Newbold2020-01-151-0/+2
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* increase SPNv2 polling timeout to 4 minutesBryan Newbold2020-01-151-1/+3
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* make failed replay fetch an error, not assert errorBryan Newbold2020-01-151-1/+2
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* kafka config: actually we do want large bulk ingest request topicBryan Newbold2020-01-151-1/+1
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* improve sentry reporting with 'release' git hashBryan Newbold2020-01-152-2/+5
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* wayback replay: catch UnicodeDecodeErrorBryan Newbold2020-01-151-0/+2
| | | | | | | | In prod, ran in to a redirect URL like: b'/web/20200116043630id_/https://mediarep.org/bitstream/handle/doc/1127/Barth\xe9l\xe9my_2015_Life_and_Technology.pdf;jsessionid=A9EFB2798846F5E14A8473BBFD6AB46C?sequence=1' which broke requests.
* persist: fix dupe field copyingBryan Newbold2020-01-151-1/+8
| | | | | | In testing hit: AttributeError: 'str' object has no attribute 'get'
* persist worker: implement updated ingest result semanticsBryan Newbold2020-01-152-12/+17
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* clarify ingest result schema and semanticsBryan Newbold2020-01-155-30/+82
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* pass through revisit_cdxBryan Newbold2020-01-152-5/+21
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* fix revisit resolutionBryan Newbold2020-01-151-4/+12
| | | | | Returns the *original* CDX record, but keeps the terminal_url and terminal_sha1hex info.
* database statsBryan Newbold2020-01-142-0/+289
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* add new bulk ingest request topicBryan Newbold2020-01-141-1/+6
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* add postgrest checks to test mocksBryan Newbold2020-01-141-1/+9
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* tests: don't use localhost as a responses mock hostBryan Newbold2020-01-142-6/+6
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* bulk ingest file request topic supportBryan Newbold2020-01-141-1/+7
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* ingest: sketch out more of how 'existing' path would workBryan Newbold2020-01-141-8/+22
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* ingest: check existing GROBID; also push results to sinkBryan Newbold2020-01-141-4/+22
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* ingest persist skips 'existing' ingest resultsBryan Newbold2020-01-141-0/+3
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* grobid-to-kafka support in ingest workerBryan Newbold2020-01-141-0/+6
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* grobid worker fixes for newer ia lib refactorsBryan Newbold2020-01-141-3/+9
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* small fixups to SandcrawlerPostgrestClientBryan Newbold2020-01-142-1/+11
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* filter out archive.org and web.archive.org (until implemented)Bryan Newbold2020-01-141-1/+12
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* clarify pmc/pmcid pairingBryan Newbold2020-01-141-3/+3
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