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-rw-r--r--mapreduce/tests/test_extraction_cdx_grobid.py54
1 files changed, 49 insertions, 5 deletions
diff --git a/mapreduce/tests/test_extraction_cdx_grobid.py b/mapreduce/tests/test_extraction_cdx_grobid.py
index fa6f71f..1bf2420 100644
--- a/mapreduce/tests/test_extraction_cdx_grobid.py
+++ b/mapreduce/tests/test_extraction_cdx_grobid.py
@@ -14,6 +14,9 @@ from extraction_cdx_grobid import MRExtractCdxGrobid, Resource
FAKE_PDF_BYTES = b"%PDF SOME JUNK" + struct.pack("!q", 112853843)
OK_CDX_LINE = b"""com,sagepub,cep)/content/28/9/960.full.pdf 20170705062200 http://cep.sagepub.com/content/28/9/960.full.pdf application/pdf 200 ABCDEF12345Q2MSVX7XZKYAYSCX5QBYJ - - 401 313356621 CITESEERX-CRAWL-2017-06-20-20170705061647307-00039-00048-wbgrp-svc284/CITESEERX-CRAWL-2017-06-20-20170705062052659-00043-31209~wbgrp-svc284.us.archive.org~8443.warc.gz"""
+with open('tests/files/23b29ea36382680716be08fc71aa81bd226e8a85.xml', 'r') as f:
+ REAL_TEI_XML = f.read()
+
@pytest.fixture
def job():
"""
@@ -34,10 +37,8 @@ def job():
@responses.activate
def test_mapper_lines(mock_fetch, job):
- with open('tests/files/23b29ea36382680716be08fc71aa81bd226e8a85.xml', 'r') as f:
- real_tei_xml = f.read()
responses.add(responses.POST, 'http://localhost:8070/api/processFulltextDocument', status=200,
- body=real_tei_xml, content_type='text/xml')
+ body=REAL_TEI_XML, content_type='text/xml')
raw = io.BytesIO(b"""
com,sagepub,cep)/content/28/9/960.full.pdf 20170705062200 http://cep.sagepub.com/content/28/9/960.full.pdf application/pdf 301 3I42H3S6NNFQ2MSVX7XZKYAYSCX5QBYJ - - 401 313356621 CITESEERX-CRAWL-2017-06-20-20170705061647307-00039-00048-wbgrp-svc284/CITESEERX-CRAWL-2017-06-20-20170705062052659-00043-31209~wbgrp-svc284.us.archive.org~8443.warc.gz
@@ -81,7 +82,7 @@ com,pbworks,educ333b)/robots.txt 20170705063311 http://educ333b.pbworks.com/robo
# TODO: assert row[b'grobid0:quality'] == None
status = json.loads(row[b'grobid0:status'].decode('utf-8'))
assert type(status) == type(dict())
- assert row[b'grobid0:tei_xml'].decode('utf-8') == real_tei_xml
+ assert row[b'grobid0:tei_xml'].decode('utf-8') == REAL_TEI_XML
tei_json = json.loads(row[b'grobid0:tei_json'].decode('utf-8'))
metadata = json.loads(row[b'grobid0:metadata'].decode('utf-8'))
assert tei_json['title'] == metadata['title']
@@ -183,10 +184,31 @@ def test_grobid_not_xml(mock_fetch, job):
output = io.BytesIO()
job.sandbox(stdin=io.BytesIO(OK_CDX_LINE), stdout=output)
job.run_mapper()
+ output = output.getvalue().decode('utf-8')
+ row = job.hb_table.row(b'sha1:ABCDEF12345Q2MSVX7XZKYAYSCX5QBYJ')
+ assert struct.unpack("!q", row[b'grobid0:status_code'])[0] == 200
+ assert row[b'grobid0:tei_xml'] == payload
+ assert b'grobid0:tei_json' not in row
+ assert "XML parse error" in output
+
+
+@mock.patch('extraction_cdx_grobid.MRExtractCdxGrobid.fetch_warc_content', return_value=(FAKE_PDF_BYTES, None))
+@responses.activate
+def test_grobid_not_tei(mock_fetch, job):
+
+ payload = b'<xml></xml>'
+ responses.add(responses.POST, 'http://localhost:8070/api/processFulltextDocument', status=200,
+ body=payload)
+
+ output = io.BytesIO()
+ job.sandbox(stdin=io.BytesIO(OK_CDX_LINE), stdout=output)
+ job.run_mapper()
+ output = output.getvalue().decode('utf-8')
row = job.hb_table.row(b'sha1:ABCDEF12345Q2MSVX7XZKYAYSCX5QBYJ')
assert struct.unpack("!q", row[b'grobid0:status_code'])[0] == 200
assert row[b'grobid0:tei_xml'] == payload
assert b'grobid0:tei_json' not in row
+ assert "non-TEI content" in output
@mock.patch('extraction_cdx_grobid.MRExtractCdxGrobid.fetch_warc_content', return_value=(FAKE_PDF_BYTES, None))
@@ -247,7 +269,7 @@ def test_wayback_not_found(mock_rs, job):
def test_mapper_rerun(mock_fetch, job):
responses.add(responses.POST, 'http://localhost:8070/api/processFulltextDocument', status=200,
- body=b"FAKE", content_type='text/xml')
+ body=REAL_TEI_XML, content_type='text/xml')
output1 = io.BytesIO()
job.sandbox(stdin=io.BytesIO(OK_CDX_LINE), stdout=output1)
@@ -273,3 +295,25 @@ def test_mapper_rerun(mock_fetch, job):
# grobid still only POST 1x times
assert len(responses.calls) == 1
assert 'existing' in output2
+
+@mock.patch('extraction_cdx_grobid.MRExtractCdxGrobid.fetch_warc_content', return_value=(FAKE_PDF_BYTES, None))
+@responses.activate
+def test_mapper_previously_backfilled(mock_fetch, job):
+
+ responses.add(responses.POST, 'http://localhost:8070/api/processFulltextDocument', status=200,
+ body=REAL_TEI_XML, content_type='text/xml')
+
+ job.hb_table.put(b'sha1:ABCDEF12345Q2MSVX7XZKYAYSCX5QBYJ',
+ {b'f:c': b'{"some": "dict"}', b'file:col': b'bogus'})
+ assert job.hb_table.row(b'sha1:ABCDEF12345Q2MSVX7XZKYAYSCX5QBYJ') != {}
+
+ output1 = io.BytesIO()
+ job.sandbox(stdin=io.BytesIO(OK_CDX_LINE), stdout=output1)
+ job.run_mapper()
+ output1 = output1.getvalue().decode('utf-8')
+
+ # wayback gets FETCH 1x times
+ assert mock_fetch.call_count == 1
+ # grobid gets POST 1x times
+ assert len(responses.calls) == 1
+ assert 'success' in output1