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authorMartin Czygan <martin.czygan@gmail.com>2021-09-10 20:34:21 +0200
committerMartin Czygan <martin.czygan@gmail.com>2021-09-10 20:34:21 +0200
commit3a79551dfe54ba668f7eee9de88625a0d33d9c7f (patch)
treee0038e145fdf93b2481707f887d021113f981e74
parent5e351469cead9337293b449b946db9d3c2c49925 (diff)
downloadrefcat-3a79551dfe54ba668f7eee9de88625a0d33d9c7f.tar.gz
refcat-3a79551dfe54ba668f7eee9de88625a0d33d9c7f.zip
docs: version with refs_types graph
-rw-r--r--docs/TR-20210808100000-IA-WDS-REFCAT/main.pdfbin93825 -> 140144 bytes
-rw-r--r--docs/TR-20210808100000-IA-WDS-REFCAT/main.tex35
-rw-r--r--docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.dot18
-rw-r--r--docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.pngbin0 -> 42338 bytes
4 files changed, 47 insertions, 6 deletions
diff --git a/docs/TR-20210808100000-IA-WDS-REFCAT/main.pdf b/docs/TR-20210808100000-IA-WDS-REFCAT/main.pdf
index f4273e4..97cfc56 100644
--- a/docs/TR-20210808100000-IA-WDS-REFCAT/main.pdf
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diff --git a/docs/TR-20210808100000-IA-WDS-REFCAT/main.tex b/docs/TR-20210808100000-IA-WDS-REFCAT/main.tex
index b278149..b020a47 100644
--- a/docs/TR-20210808100000-IA-WDS-REFCAT/main.tex
+++ b/docs/TR-20210808100000-IA-WDS-REFCAT/main.tex
@@ -322,10 +322,12 @@ is processed continously or in batches). Reference data from PDF documents has
been extracted with GROBID\footnote{GROBID
\href{https://github.com/kermitt2/grobid/releases/tag/0.5.5}{v0.5.5}}, with the
TEI-XML results being cached locally in a key-value store accessible with an S3
-API. Archived PDF documents result from dedicated web-scale crawls of scholarly
-domains conducted with
-Heritrix\footnote{\href{https://github.com/internetarchive/heritrix3}{https://github.com/internetarchive/heritrix3}} (and
-other crawl technologies) and a variety of seed lists targeting journal
+API\footnote{Currently,
+ \href{https://github.com/chrislusf/seaweedfs}{https://github.com/chrislusf/seaweedfs}
+ is used}. Archived PDF documents result from dedicated web-scale crawls of
+scholarly domains conducted with
+Heritrix\footnote{\href{https://github.com/internetarchive/heritrix3}{https://github.com/internetarchive/heritrix3}}
+(and other crawl technologies) and a variety of seed lists targeting journal
homepages, repositories, dataset providers, aggregators, web archives and other
venues. A processing pipeline merges catalog data from the primary database and
cached data from the key-value store and generates the set of about 2.5B
@@ -367,6 +369,13 @@ derivations, as data dependencies are encoded with the help of the
orchestrator. Within the tasks, we also utilize classic platform tools such as
\emph{sort}~\citep{mcilroy1971research}.
+During a last processing step, we fuse reference matches and unmatched items
+into a single, indexable file. This step includes deduplication of different
+matching methods (e.g. prefer exact matches over fuzzy matches). This file is
+indexed into an search index and serves both matched and unmatched references
+for the web application, allowing for further collection of feedback on match
+quality and possible improvements.
+
With a few schema conversions, fuzzy matching can be applied to Wikipedia
articles and Open Library (edition) records as well. The aspect of precision
and recall are represented by the two stages: we are generous in the match
@@ -416,6 +425,19 @@ This work is partially supported by a grant from the \emph{Andrew W. Mellon
\section{Appendix A}
+Figure~\ref{fig:types} shows a schematics of actual and possible reference entities.
+
+\begin{figure}[h]
+ \centering
+ \includegraphics[width=0.45\textwidth]{refs_types.png}
+ \caption{Schematics of the main reference entities; green: included in the
+ corpus; orange: currently in development; gray: Planned, but not in
+ development; red: long-term desiderata.}
+ \label{fig:types}
+\end{figure}
+
+\section{Appendix B}
+
A note on data quality: While we implement various data quality measures,
real-world data, especially coming from many different sources will contain
@@ -491,7 +513,8 @@ more easily (see~Table~\ref{table:matches}).
\end{center}
\end{table}
-\bibliographystyle{abbrv}
-% \bibliographystyle{plainnat}
+
+% \bibliographystyle{abbrv}
+\bibliographystyle{plainnat}
\bibliography{refs}
\end{document}
diff --git a/docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.dot b/docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.dot
new file mode 100644
index 0000000..ec8cc00
--- /dev/null
+++ b/docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.dot
@@ -0,0 +1,18 @@
+// dot -Tpng refs_types.dot > refs_types.png
+digraph {
+ Papers[label="Papers\n(fatcat; incl. datasets)",shape=rect]
+ Books[label="Books\n(openlibrary)",shape=rect]
+ Encyclopedia[label="Encyclopedia\n(wikipedia)",shape=rect]
+ Web[label="Web\n(wayback)",shape=rect]
+ // OtherMedia[label="Other Media? TODO\n(archive.org)", color=orange]
+ Unmatched[label="Unknown/Unmatched", color=grey]
+ Papers -> Papers[color=green,label="1.3 billion",penwidth=2]
+ Papers -> Unmatched[color=orange,label="0.7 billion",penwidth=2]
+ Papers -> Books[color=green,label="20 million"]
+ Papers -> Web[color=orange,label="WIP / 25 million"]
+ Books -> Papers[color=red]
+ Books -> Web[color=red]
+ Books -> Books[color=red]
+ Encyclopedia -> Papers[color=green,label="1.3 million"]
+ Encyclopedia -> Books[color=gray,label="TODO"]
+}
diff --git a/docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.png b/docs/TR-20210808100000-IA-WDS-REFCAT/refs_types.png
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