diff options
Diffstat (limited to 'rust/migrations/2019-01-01-000000_init/up.sql')
| -rw-r--r-- | rust/migrations/2019-01-01-000000_init/up.sql | 663 |
1 files changed, 663 insertions, 0 deletions
diff --git a/rust/migrations/2019-01-01-000000_init/up.sql b/rust/migrations/2019-01-01-000000_init/up.sql new file mode 100644 index 00000000..ddaa60b3 --- /dev/null +++ b/rust/migrations/2019-01-01-000000_init/up.sql @@ -0,0 +1,663 @@ +-- written for Postgres 9.6 with OSSP extension for UUIDs -- ... but actually runs on Postgres 10 in qa/production + +-- Previously VARCHAR and fixed-size CHAR was used in this schema for specific +-- columns (especially fixed-size external identifiers, and hashes). This was +-- found to cause lookup problems, so switched to TEXT with CHECK constraints. + +-- Default timezone (of clients) is expected to be UTC. + +CREATE EXTENSION IF NOT EXISTS "uuid-ossp"; + + +-- uuid_generate_v1mc: timestamp ordered, random MAC address +-- uuid_generate_v4: totally random + +-- NB: could use LIKE clause, or "composite types" + +CREATE TABLE editor ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + username TEXT NOT NULL CHECK (username ~* '^[A-Za-z][A-Za-z0-9._-]{2,24}$'), -- UNIQ below + is_superuser BOOLEAN NOT NULL DEFAULT false, + is_admin BOOLEAN NOT NULL DEFAULT false, + is_bot BOOLEAN NOT NULL DEFAULT false, + is_active BOOLEAN NOT NULL DEFAULT true, + registered TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + auth_epoch TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + wrangler_id UUID REFERENCES editor(id), + active_editgroup_id UUID -- REFERENCES( editgroup(id) via ALTER below +); + +-- case-insensitive UNIQ index on username +CREATE UNIQUE INDEX editor_username_uniq_idx on editor(lower(username)); +CREATE INDEX active_editgroup_idx ON editor(active_editgroup_id); +CREATE INDEX editor_username_idx ON editor(username); + +CREATE TABLE auth_oidc ( + id BIGSERIAL PRIMARY KEY, + created TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + editor_id UUID REFERENCES editor(id) NOT NULL, + provider TEXT NOT NULL, + oidc_iss TEXT NOT NULL, + oidc_sub TEXT NOT NULL, + UNIQUE (editor_id, provider), + UNIQUE (oidc_iss, oidc_sub) +); + +CREATE TABLE editgroup ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editor_id UUID REFERENCES editor(id) NOT NULL, + created TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + extra_json JSONB, + description TEXT +); + +ALTER TABLE editor + ADD CONSTRAINT editor_editgroupid_fkey FOREIGN KEY (active_editgroup_id) + REFERENCES editgroup(id); + +CREATE TABLE changelog ( + id BIGSERIAL PRIMARY KEY, + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + timestamp TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL +); + +-- for "is this editgroup merged" queries +CREATE INDEX changelog_editgroup_idx ON changelog(editgroup_id); + +CREATE TABLE abstracts ( + -- fixed size hash (in hex). TODO: switch to bytes + sha1 TEXT PRIMARY KEY CHECK (octet_length(sha1) = 40), + content TEXT NOT NULL +); + +-------------------- Creators ----------------------------------------------- +CREATE TABLE creator_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB, + + display_name TEXT NOT NULL, + given_name TEXT, + surname TEXT, + -- fixed size identifier + orcid TEXT CHECK(octet_length(orcid) = 19), + -- limited size for data quality + wikidata_qid TEXT CHECK(octet_length(wikidata_qid) <= 12) + + -- TODO: viaf TEXT, + -- TODO: aliases/alternatives + -- TODO: sortable name? +); + +-- Could denormalize a "is_live" flag into revision tables, to make indices +-- more efficient +CREATE INDEX creator_rev_orcid_idx ON creator_rev(orcid); +CREATE INDEX creator_rev_wikidata_idx ON creator_rev(wikidata_qid); + +CREATE TABLE creator_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES creator_rev(id), + redirect_id UUID REFERENCES creator_ident(id) +); + +CREATE INDEX creator_ident_rev_idx ON creator_ident(rev_id); +CREATE INDEX creator_ident_redirect_idx ON creator_ident(redirect_id); + +CREATE TABLE creator_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES creator_ident(id) NOT NULL, + rev_id UUID REFERENCES creator_rev(id), + redirect_id UUID REFERENCES creator_ident(id), + prev_rev UUID REFERENCES creator_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +-------------------- Containers -------------------------------------------- +CREATE TABLE container_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB, + + name TEXT NOT NULL, + publisher TEXT, + -- fixed size identifier + issnl TEXT CHECK(octet_length(issnl) = 9), + -- limited size for data quality + wikidata_qid TEXT CHECK(octet_length(wikidata_qid) <= 12), + abbrev TEXT, + -- limited size for data quality + coden TEXT CHECK(octet_length(coden) <= 6) +); + +CREATE INDEX container_rev_issnl_idx ON container_rev(issnl); +CREATE INDEX container_rev_wikidata_idx ON container_rev(wikidata_qid); + +CREATE TABLE container_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES container_rev(id), + redirect_id UUID REFERENCES container_ident(id) +); + +CREATE INDEX container_ident_rev_idx ON container_ident(rev_id); +CREATE INDEX container_ident_redirect_idx ON container_ident(redirect_id); + +CREATE TABLE container_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES container_ident(id) NOT NULL, + rev_id UUID REFERENCES container_rev(id), + redirect_id UUID REFERENCES container_ident(id), + prev_rev UUID REFERENCES container_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +-------------------- Files ------------------------------------------------- +CREATE TABLE file_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB, + + size_bytes BIGINT, + -- fixed size hashes (in hex). TODO: switch to binary type type + sha1 TEXT CHECK(octet_length(sha1) = 40), + sha256 TEXT CHECK(octet_length(sha256) = 64), + md5 TEXT CHECK(octet_length(md5) = 32), + mimetype TEXT +); + +CREATE INDEX file_rev_sha1_idx ON file_rev(sha1); +CREATE INDEX file_rev_md5_idx ON file_rev(md5); +CREATE INDEX file_rev_sha256_idx ON file_rev(sha256); + +CREATE TABLE file_rev_url ( + id BIGSERIAL PRIMARY KEY, + file_rev UUID REFERENCES file_rev(id) NOT NULL, + rel TEXT NOT NULL, -- TODO: enum? web, webarchive, repo, etc TODO: default web? + url TEXT NOT NULL +); + +CREATE INDEX file_rev_url_rev_idx ON file_rev_url(file_rev); + +CREATE TABLE file_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES file_rev(id), + redirect_id UUID REFERENCES file_ident(id) +); + +CREATE INDEX file_ident_rev_idx ON file_ident(rev_id); +CREATE INDEX file_ident_redirect_idx ON file_ident(redirect_id); + +CREATE TABLE file_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES file_ident(id) NOT NULL, + rev_id UUID REFERENCES file_rev(id), + redirect_id UUID REFERENCES file_ident(id), + prev_rev UUID REFERENCES file_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +-------------------- Fileset ----------------------------------------------- +CREATE TABLE fileset_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB +); + +CREATE TABLE fileset_rev_url ( + id BIGSERIAL PRIMARY KEY, + fileset_rev UUID REFERENCES fileset_rev(id) NOT NULL, + rel TEXT NOT NULL, -- TODO: enum? web, webarchive, repo, etc TODO: default web? + url TEXT NOT NULL +); + +CREATE INDEX fileset_rev_url_rev_idx ON fileset_rev_url(fileset_rev); + +CREATE TABLE fileset_rev_file ( + id BIGSERIAL PRIMARY KEY, + fileset_rev UUID REFERENCES fileset_rev(id) NOT NULL, + path_name TEXT NOT NULL, + size_bytes BIGINT NOT NULL, + md5 TEXT CHECK(octet_length(md5) = 32), + sha1 TEXT CHECK(octet_length(sha1) = 40), + sha256 TEXT CHECK(octet_length(sha256) = 64), + extra_json JSONB +); + +CREATE INDEX fileset_rev_file_rev_idx ON fileset_rev_file(fileset_rev); + +CREATE TABLE fileset_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES fileset_rev(id), + redirect_id UUID REFERENCES fileset_ident(id) +); + +CREATE INDEX fileset_ident_rev_idx ON fileset_ident(rev_id); + +CREATE TABLE fileset_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES fileset_ident(id) NOT NULL, + rev_id UUID REFERENCES fileset_rev(id), + redirect_id UUID REFERENCES fileset_ident(id), + prev_rev UUID REFERENCES fileset_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +-------------------- Webcapture ----------------------------------------------- +CREATE TABLE webcapture_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB, + + original_url TEXT NOT NULL, + timestamp TIMESTAMP WITH TIME ZONE NOT NULL +); + +CREATE TABLE webcapture_rev_url ( + id BIGSERIAL PRIMARY KEY, + webcapture_rev UUID REFERENCES webcapture_rev(id) NOT NULL, + rel TEXT NOT NULL, -- TODO: enum? web, webarchive, repo, etc TODO: default web? + url TEXT NOT NULL +); + +CREATE INDEX webcapture_rev_url_rev_idx ON webcapture_rev_url(webcapture_rev); + +CREATE TABLE webcapture_rev_cdx ( + id BIGSERIAL PRIMARY KEY, + webcapture_rev UUID REFERENCES webcapture_rev(id) NOT NULL, + surt TEXT NOT NULL, + timestamp TEXT NOT NULL, -- TODO: timestamp type? + url TEXT NOT NULL, + mimetype TEXT, + status_code BIGINT, + sha1 TEXT CHECK(octet_length(sha1) = 40) NOT NULL, + sha256 TEXT CHECK(octet_length(sha256) = 64) + -- could extend with: language (detection), simhash, redirect +); + +CREATE INDEX webcapture_rev_cdx_rev_idx ON webcapture_rev_cdx(webcapture_rev); + +CREATE TABLE webcapture_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES webcapture_rev(id), + redirect_id UUID REFERENCES webcapture_ident(id) +); + +CREATE INDEX webcapture_ident_rev_idx ON webcapture_ident(rev_id); + +CREATE TABLE webcapture_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES webcapture_ident(id) NOT NULL, + rev_id UUID REFERENCES webcapture_rev(id), + redirect_id UUID REFERENCES webcapture_ident(id), + prev_rev UUID REFERENCES webcapture_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +-------------------- Release ----------------------------------------------- +CREATE TABLE release_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB, + + work_ident_id UUID NOT NULL, -- FOREIGN KEY; see ALRTER below + container_ident_id UUID REFERENCES container_ident(id), + title TEXT NOT NULL, + release_type TEXT, -- TODO: enum + release_status TEXT, -- TODO: enum + release_date DATE, + release_year BIGINT, + doi TEXT, + -- CHECK for length limit for data quality + pmid TEXT CHECK(octet_length(pmid) <= 12), + pmcid TEXT CHECK(octet_length(pmcid) <= 12), + wikidata_qid TEXT CHECK(octet_length(wikidata_qid) <= 12), + isbn13 TEXT CHECK(octet_length(isbn13) = 17), + core_id TEXT CHECK(octet_length(core_id) <= 12), + volume TEXT, + issue TEXT, + pages TEXT, + publisher TEXT, -- for books, NOT if container exists + language TEXT -- primary language of the work's fulltext; RFC1766/ISO639-1 + -- TODO: oclc_ocn (TEXT or BIGINT) + -- TODO: identifier table? +); + +CREATE INDEX release_rev_doi_idx ON release_rev(doi); +CREATE INDEX release_rev_pmid_idx ON release_rev(pmid); +CREATE INDEX release_rev_pmcid_idx ON release_rev(pmcid); +CREATE INDEX release_rev_wikidata_idx ON release_rev(wikidata_qid); +CREATE INDEX release_rev_isbn13_idx ON release_rev(isbn13); +CREATE INDEX release_rev_core_idx ON release_rev(core_id); +CREATE INDEX release_rev_work_idx ON release_rev(work_ident_id); + +CREATE TABLE release_rev_abstract ( + id BIGSERIAL PRIMARY KEY, + release_rev UUID REFERENCES release_rev(id) NOT NULL, + abstract_sha1 TEXT REFERENCES abstracts(sha1) NOT NULL, + mimetype TEXT, + lang TEXT +); + +CREATE INDEX release_rev_abstract_rev_idx ON release_rev_abstract(release_rev); +CREATE INDEX release_rev_abstract_sha1_idx ON release_rev_abstract(abstract_sha1); + +CREATE TABLE release_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES release_rev(id), + redirect_id UUID REFERENCES release_ident(id) +); + +CREATE INDEX release_ident_rev_idx ON release_ident(rev_id); +CREATE INDEX release_ident_redirect_idx ON release_ident(redirect_id); + +CREATE TABLE release_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES release_ident(id) NOT NULL, + rev_id UUID REFERENCES release_rev(id), + redirect_id UUID REFERENCES release_ident(id), + prev_rev UUID REFERENCES release_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +-------------------- Works -------------------------------------------------- +CREATE TABLE work_rev ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + extra_json JSONB +); + +CREATE TABLE work_ident ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + is_live BOOL NOT NULL DEFAULT false, + rev_id UUID REFERENCES work_rev(id), + redirect_id UUID REFERENCES work_ident(id) +); + +CREATE INDEX work_ident_rev_idx ON work_ident(rev_id); +CREATE INDEX work_ident_redirect_idx ON work_ident(redirect_id); + +CREATE TABLE work_edit ( + id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), + editgroup_id UUID REFERENCES editgroup(id) NOT NULL, + updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, + ident_id UUID REFERENCES work_ident(id) NOT NULL, + rev_id UUID REFERENCES work_rev(id), + redirect_id UUID REFERENCES work_ident(id), + prev_rev UUID REFERENCES work_rev(id), + extra_json JSONB, + UNIQUE (editgroup_id, ident_id) +); + +ALTER TABLE release_rev + ADD CONSTRAINT release_containeridentid_fkey FOREIGN KEY (work_ident_id) + REFERENCES work_ident(id); + +-------------------- Inter-Entity Relations + +CREATE TABLE release_contrib ( + id BIGSERIAL PRIMARY KEY, + release_rev UUID REFERENCES release_rev(id) NOT NULL, + creator_ident_id UUID REFERENCES creator_ident(id), + raw_name TEXT, + role TEXT, -- TODO: enum? + index_val INTEGER, + extra_json JSONB +); + +CREATE INDEX release_contrib_rev_idx ON release_contrib(release_rev); +CREATE INDEX release_contrib_creator_idx ON release_contrib(creator_ident_id); + +CREATE TABLE release_ref ( + id BIGSERIAL PRIMARY KEY, + release_rev UUID REFERENCES release_rev(id) NOT NULL, + target_release_ident_id UUID REFERENCES release_ident(id), -- or work? + index_val INTEGER, + key TEXT, + extra_json JSONB, -- title, year, container_title, locator (aka, page), oci_id + container_name TEXT, + year INTEGER, + title TEXT, + locator TEXT + -- TODO: oci_id (TEXT) +); + +CREATE INDEX release_ref_rev_idx ON release_ref(release_rev); +CREATE INDEX release_ref_target_release_idx ON release_ref(target_release_ident_id); + +CREATE TABLE file_rev_release ( + file_rev UUID REFERENCES file_rev(id) NOT NULL, + target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, + PRIMARY KEY (file_rev, target_release_ident_id) +); +CREATE INDEX file_rev_release_target_release_idx ON file_rev_release(target_release_ident_id); +CREATE TABLE fileset_rev_release ( + fileset_rev UUID REFERENCES fileset_rev(id) NOT NULL, + target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, + PRIMARY KEY (fileset_rev, target_release_ident_id) +); +CREATE INDEX fileset_rev_release_target_release_idx ON fileset_rev_release(target_release_ident_id); +CREATE TABLE webcapture_rev_release ( + webcapture_rev UUID REFERENCES webcapture_rev(id) NOT NULL, + target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, + PRIMARY KEY (webcapture_rev, target_release_ident_id) +); +CREATE INDEX webcapture_rev_release_target_release_idx ON webcapture_rev_release(target_release_ident_id); + +--------------------------------------------------------------------------- +--------------------------------------------------------------------------- +--------------------------------------------------------------------------- + +-- Fake data at the raw SQL level, for early development and testing +-- Convention: +-- * first entity is smallest possible (mostly null) +-- * second entity is rich (all fields/relations designed) but artificial +-- * third entity (and above) are realistic (real DOI, etc) + +BEGIN; + +INSERT INTO editor (id, username, is_superuser, is_admin, is_bot, auth_epoch) VALUES + ('00000000-0000-0000-AAAA-000000000001', 'root', true, true, false, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaae + ('00000000-0000-0000-AAAA-000000000002', 'admin', true, true, false, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaai + ('00000000-0000-0000-AAAA-000000000003', 'demo-user', false, true, false, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaam + ('00000000-0000-0000-AAAA-000000000004', 'claire', false, false, false, default), -- aaaaaaaaaaaabkvkaaaaaaaaaq + ('00000000-0000-0000-AAAA-000000000005', 'webface-bot', true, true, true, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaau + ('00000000-0000-0000-AAAA-000000000006', 'bnewbold', false, true, false, '1970-01-01T01:01:01Z'); -- aaaaaaaaaaaabkvkaaaaaaaaay + +INSERT INTO editgroup (id, editor_id, description) VALUES + ('00000000-0000-0000-BBBB-000000000001', '00000000-0000-0000-AAAA-000000000001', 'first edit ever!'), -- aaaaaaaaaaaabo53aaaaaaaaae + ('00000000-0000-0000-BBBB-000000000002', '00000000-0000-0000-AAAA-000000000001', 'another one!'), -- aaaaaaaaaaaabo53aaaaaaaaai + ('00000000-0000-0000-BBBB-000000000003', '00000000-0000-0000-AAAA-000000000003', 'user edit'), -- aaaaaaaaaaaabo53aaaaaaaaam + ('00000000-0000-0000-BBBB-000000000004', '00000000-0000-0000-AAAA-000000000002', 'uncommited edit'), -- aaaaaaaaaaaabo53aaaaaaaaaq + ('00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-AAAA-000000000001', 'journal edit'), -- aaaaaaaaaaaabo53aaaaaaaaau + ('00000000-0000-0000-BBBB-000000000006', '00000000-0000-0000-AAAA-000000000001', 'another journal edit'); -- aaaaaaaaaaaabo53aaaaaaaaay + +INSERT INTO changelog (editgroup_id) VALUES + ('00000000-0000-0000-BBBB-000000000001'), + ('00000000-0000-0000-BBBB-000000000002'), + ('00000000-0000-0000-BBBB-000000000003'), + ('00000000-0000-0000-BBBB-000000000004'), + ('00000000-0000-0000-BBBB-000000000005'); + +INSERT INTO abstracts (sha1, content) VALUES + ('1ba86bf8c2979a62d29b18b537e50b2b093be27e', 'some long abstract in plain text'), + ('0da908ab584b5e445a06beb172e3fab8cb5169e3', '<jats>A longer, more correct abstract should in theory go here</jats>'); + +INSERT INTO container_rev (id, name, publisher, issnl, abbrev, coden, extra_json) VALUES + ('00000000-0000-0000-1111-FFF000000001', 'MySpace Blog', null, null, null, null, null), + ('00000000-0000-0000-1111-FFF000000002', 'Journal of Trivial Results', 'bogus publishing group', '1234-5678', 'Triv. Res.', 'CDNXYZ', '{"is_oa": false, "in_doaj": false}'), + ('00000000-0000-0000-1111-FFF000000003', 'PLOS Medicine', 'Public Library of Science', '1549-1277', 'PLoS med.', null, '{"is_oa": true, "in_doaj": true}'); + +INSERT INTO container_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-1111-000000000001', true, '00000000-0000-0000-1111-FFF000000001', null), -- aaaaaaaaaaaaaeiraaaaaaaaae + ('00000000-0000-0000-1111-000000000002', true, '00000000-0000-0000-1111-FFF000000002', null), -- aaaaaaaaaaaaaeiraaaaaaaaai + ('00000000-0000-0000-1111-000000000003', true, '00000000-0000-0000-1111-FFF000000003', null); -- aaaaaaaaaaaaaeiraaaaaaaaam + +INSERT INTO container_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-1111-000000000001', '00000000-0000-0000-1111-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-1111-000000000002', '00000000-0000-0000-1111-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), + ('00000000-0000-0000-1111-000000000003', '00000000-0000-0000-1111-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-1111-FFF000000002'); + +INSERT INTO creator_rev (id, display_name, given_name, surname, orcid, wikidata_qid) VALUES + ('00000000-0000-0000-2222-FFF000000001', 'Grace Hopper', null, null, null, null), + ('00000000-0000-0000-2222-FFF000000002', 'Christine Moran', 'Christine', 'Moran', '0000-0003-2088-7465', 'Q1234'), + ('00000000-0000-0000-2222-FFF000000003', 'John P. A. Ioannidis', 'John', 'Ioannidis', '0000-0003-3118-6859', 'Q5678'); + +INSERT INTO creator_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-2222-000000000001', true, '00000000-0000-0000-2222-FFF000000001', null), -- aaaaaaaaaaaaaircaaaaaaaaae + ('00000000-0000-0000-2222-000000000002', true, '00000000-0000-0000-2222-FFF000000002', null), -- aaaaaaaaaaaaaircaaaaaaaaai + ('00000000-0000-0000-2222-000000000003', true, '00000000-0000-0000-2222-FFF000000003', null), -- aaaaaaaaaaaaaircaaaaaaaaam + ('00000000-0000-0000-2222-000000000004', false, '00000000-0000-0000-2222-FFF000000002', null); -- aaaaaaaaaaaaaircaaaaaaaaaq + +INSERT INTO creator_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-2222-000000000001', '00000000-0000-0000-2222-FFF000000001', null, '00000000-0000-0000-BBBB-000000000001', null), + ('00000000-0000-0000-2222-000000000002', '00000000-0000-0000-2222-FFF000000002', null, '00000000-0000-0000-BBBB-000000000002', null), + ('00000000-0000-0000-2222-000000000003', '00000000-0000-0000-2222-FFF000000003', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-2222-000000000004', '00000000-0000-0000-2222-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', '00000000-0000-0000-2222-FFF000000003'); + +INSERT INTO file_rev (id, size_bytes, sha1, sha256, md5, mimetype) VALUES + ('00000000-0000-0000-3333-FFF000000001', null, null, null, null, null), + ('00000000-0000-0000-3333-FFF000000002', 4321, '7d97e98f8af710c7e7fe703abc8f639e0ee507c4', null, null, 'text/plain'), + ('00000000-0000-0000-3333-FFF000000003', 255629, '3f242a192acc258bdfdb151943419437f440c313', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362', 'f4de91152c7ab9fdc2a128f962faebff', 'application/pdf'); + +INSERT INTO file_rev_url (file_rev, rel, url) VALUES + ('00000000-0000-0000-3333-FFF000000002', 'web', 'http://archive.org/robots.txt'), + ('00000000-0000-0000-3333-FFF000000003', 'publisher', 'http://journals.plos.org/plosmedicine/article/file?id=10.1371/journal.pmed.0020124&type=printable'); + +INSERT INTO file_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-3333-000000000001', true, '00000000-0000-0000-3333-FFF000000001', null), -- aaaaaaaaaaaaamztaaaaaaaaae + ('00000000-0000-0000-3333-000000000002', true, '00000000-0000-0000-3333-FFF000000002', null), -- aaaaaaaaaaaaamztaaaaaaaaai + ('00000000-0000-0000-3333-000000000003', true, '00000000-0000-0000-3333-FFF000000003', null); -- aaaaaaaaaaaaamztaaaaaaaaam + +INSERT INTO file_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-3333-000000000001', '00000000-0000-0000-3333-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-3333-000000000002', '00000000-0000-0000-3333-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), + ('00000000-0000-0000-3333-000000000003', '00000000-0000-0000-3333-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-3333-FFF000000002'); + +INSERT INTO fileset_rev (id) VALUES + ('00000000-0000-0000-6666-FFF000000001'), + ('00000000-0000-0000-6666-FFF000000002'), + ('00000000-0000-0000-6666-FFF000000003'); + +INSERT INTO fileset_rev_file (fileset_rev, path_name, size_bytes, md5, sha1, sha256, extra_json) VALUES + ('00000000-0000-0000-6666-FFF000000002', 'README.md', 1024, null, null, null, null), + ('00000000-0000-0000-6666-FFF000000003', 'README.md', 2048, null, null, null, null), + ('00000000-0000-0000-6666-FFF000000003', 'stuff/data.tar.gz', 2340000, 'f4de91152c7ab9fdc2a128f962faebff', '3f242a192acc258bdfdb151943419437f440c313', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362', '{"mimetype": "application/gzip"}'); + +INSERT INTO fileset_rev_url (fileset_rev, rel, url) VALUES + ('00000000-0000-0000-6666-FFF000000002', 'web', 'http://personal-blog.name/dataset/'), + ('00000000-0000-0000-6666-FFF000000003', 'web', 'http://other-personal-blog.name/dataset/'), + ('00000000-0000-0000-6666-FFF000000003', 'archive', 'https://archive.org/download/random-dataset/'); + +INSERT INTO fileset_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-6666-000000000001', true, '00000000-0000-0000-6666-FFF000000001', null), -- aaaaaaaaaaaaaztgaaaaaaaaam + ('00000000-0000-0000-6666-000000000002', true, '00000000-0000-0000-6666-FFF000000002', null), -- aaaaaaaaaaaaaztgaaaaaaaaai + ('00000000-0000-0000-6666-000000000003', true, '00000000-0000-0000-6666-FFF000000003', null); -- aaaaaaaaaaaaaztgaaaaaaaaam + +INSERT INTO fileset_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-6666-000000000001', '00000000-0000-0000-6666-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-6666-000000000002', '00000000-0000-0000-6666-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), + ('00000000-0000-0000-6666-000000000003', '00000000-0000-0000-6666-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-6666-FFF000000002'); + +INSERT INTO webcapture_rev (id, original_url, timestamp) VALUES + ('00000000-0000-0000-7777-FFF000000001', 'http://example.org', '1996-01-02T12:34:56Z'), + ('00000000-0000-0000-7777-FFF000000002', 'http://example.org', '1996-01-02T12:34:56Z'), + ('00000000-0000-0000-7777-FFF000000003', 'https://asheesh.org', '2003-02-17T04:47:21Z'); + +INSERT INTO webcapture_rev_cdx (webcapture_rev, surt, timestamp, url, mimetype, status_code, sha1, sha256) VALUES + ('00000000-0000-0000-7777-FFF000000002', 'org,example)/', 19960102123456, 'http://example.org', null, 200, '5886903ba5aeaf7446fe9f77bd03adfc029cedf0', null), + ('00000000-0000-0000-7777-FFF000000003', 'org,asheesh)/', 20030217044721, 'http://asheesh.org:80/', 'text/html', 200, '5886903ba5aeaf7446fe9f77bd03adfc029cedf0', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362'), + ('00000000-0000-0000-7777-FFF000000003', 'org,asheesh)/robots.txt', 20030217044719, 'http://asheesh.org:80/robots.txt', 'text/html', 404, 'a637f1d27d9bcb237310ed29f19c07e1c8cf0aa5', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362'); + +INSERT INTO webcapture_rev_url (webcapture_rev, rel, url) VALUES + ('00000000-0000-0000-7777-FFF000000002', 'wayback', 'http://web.archive.org/201801010001/http://example.org'), + ('00000000-0000-0000-7777-FFF000000003', 'wayback', 'http://web.archive.org/201801010001/https://asheesh.org'), + ('00000000-0000-0000-7777-FFF000000003', 'warc', 'https://example.org/something.warc.gz'); + +INSERT INTO webcapture_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-7777-000000000001', true, '00000000-0000-0000-7777-FFF000000001', null), -- aaaaaaaaaaaaa53xaaaaaaaaae + ('00000000-0000-0000-7777-000000000002', true, '00000000-0000-0000-7777-FFF000000002', null), -- aaaaaaaaaaaaa53xaaaaaaaaai + ('00000000-0000-0000-7777-000000000003', true, '00000000-0000-0000-7777-FFF000000003', null); -- aaaaaaaaaaaaa53xaaaaaaaaam + +INSERT INTO webcapture_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-7777-000000000001', '00000000-0000-0000-7777-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-7777-000000000002', '00000000-0000-0000-7777-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), + ('00000000-0000-0000-7777-000000000003', '00000000-0000-0000-7777-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-7777-FFF000000002'); + +INSERT INTO work_rev (id) VALUES + ('00000000-0000-0000-5555-FFF000000001'), + ('00000000-0000-0000-5555-FFF000000002'), + ('00000000-0000-0000-5555-FFF000000003'); + +INSERT INTO work_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-5555-000000000001', true, '00000000-0000-0000-5555-FFF000000001', null), -- aaaaaaaaaaaaavkvaaaaaaaaae + ('00000000-0000-0000-5555-000000000002', true, '00000000-0000-0000-5555-FFF000000002', null), -- aaaaaaaaaaaaavkvaaaaaaaaai + ('00000000-0000-0000-5555-000000000003', true, '00000000-0000-0000-5555-FFF000000003', null); -- aaaaaaaaaaaaavkvaaaaaaaaam + +INSERT INTO work_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-5555-000000000001', '00000000-0000-0000-5555-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-5555-000000000002', '00000000-0000-0000-5555-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), + ('00000000-0000-0000-5555-000000000002', '00000000-0000-0000-5555-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-5555-FFF000000002'); + +INSERT INTO release_rev (id, work_ident_id, container_ident_id, title, release_type, release_status, release_date, release_year, doi, wikidata_qid, pmid, pmcid, isbn13, core_id, volume, issue, pages, publisher, language) VALUES + ('00000000-0000-0000-4444-FFF000000001', '00000000-0000-0000-5555-000000000001', null, 'example title', null, null, null, null, null, null, null, null, null, null, null, null, null, null, null), + ('00000000-0000-0000-4444-FFF000000002', '00000000-0000-0000-5555-000000000002', '00000000-0000-0000-1111-000000000001', 'bigger example', 'article-journal', null, '2018-01-01', 2018, '10.123/abc', 'Q55555', '54321', 'PMC555','978-3-16-148410-0', '42022773', '12', 'IV', '5-9', 'bogus publishing group', 'cn'), + ('00000000-0000-0000-4444-FFF000000003', '00000000-0000-0000-5555-000000000003', '00000000-0000-0000-1111-000000000003', 'Why Most Published Research Findings Are False', 'article-journal', 'published', '2005-08-30', 2005, '10.1371/journal.pmed.0020124', null, null, null, null, null, '2', '8', 'e124', 'Public Library of Science', 'en'); + +INSERT INTO release_ident (id, is_live, rev_id, redirect_id) VALUES + ('00000000-0000-0000-4444-000000000001', true, '00000000-0000-0000-4444-FFF000000001', null), -- aaaaaaaaaaaaarceaaaaaaaaae + ('00000000-0000-0000-4444-000000000002', true, '00000000-0000-0000-4444-FFF000000002', null), -- aaaaaaaaaaaaarceaaaaaaaaai + ('00000000-0000-0000-4444-000000000003', true, '00000000-0000-0000-4444-FFF000000003', null); -- aaaaaaaaaaaaarceaaaaaaaaam + +INSERT INTO release_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES + ('00000000-0000-0000-4444-000000000001', '00000000-0000-0000-4444-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), + ('00000000-0000-0000-4444-000000000002', '00000000-0000-0000-4444-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), + ('00000000-0000-0000-4444-000000000003', '00000000-0000-0000-4444-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-4444-FFF000000002'); + +INSERT INTO release_rev_abstract (release_rev, abstract_sha1, mimetype, lang) VALUES + ('00000000-0000-0000-4444-FFF000000001', '1ba86bf8c2979a62d29b18b537e50b2b093be27e', 'text/plain', 'en'), + ('00000000-0000-0000-4444-FFF000000002', '0da908ab584b5e445a06beb172e3fab8cb5169e3', 'application/xml+jats', 'en'); + +INSERT INTO release_contrib (release_rev, creator_ident_id, raw_name, role, index_val) VALUES + ('00000000-0000-0000-4444-FFF000000002', null, null, null, null), + ('00000000-0000-0000-4444-FFF000000002', '00000000-0000-0000-2222-000000000002', 'some contrib', 'editor', 4), + ('00000000-0000-0000-4444-FFF000000003', '00000000-0000-0000-2222-000000000003', 'John P. A. Ioannidis', 'author', 0); + +INSERT INTO release_ref (release_rev, target_release_ident_id, index_val, extra_json) VALUES + ('00000000-0000-0000-4444-FFF000000002', null, null, null), + ('00000000-0000-0000-4444-FFF000000002', '00000000-0000-0000-4444-000000000001', 4, '{"unstructured":"citation note"}'), + ('00000000-0000-0000-4444-FFF000000003', null, 0, '{"unstructured": "Ioannidis JP, Haidich AB, Lau J. Any casualties in the clash of randomised and observational evidence? BMJ. 2001;322:879–880"}'), + ('00000000-0000-0000-4444-FFF000000003', null, 1, '{"unstructured":"Lawlor DA, Davey Smith G, Kundu D, Bruckdorfer KR, Ebrahim S. Those confounded vitamins: What can we learn from the differences between observational versus randomised trial evidence? Lancet. 2004;363:1724–1727."}'), + ('00000000-0000-0000-4444-FFF000000003', null, 2, '{"unstructured":"Vandenbroucke JP. When are observational studies as credible as randomised trials? Lancet. 2004;363:1728–1731."}'), + ('00000000-0000-0000-4444-FFF000000003', null, 3, '{"unstructured":"Michiels S, Koscielny S, Hill C. Prediction of cancer outcome with microarrays: A multiple random validation strategy. Lancet. 2005;365:488–492."}'), + ('00000000-0000-0000-4444-FFF000000003', null, 4, '{"unstructured":"Ioannidis JPA, Ntzani EE, Trikalinos TA, Contopoulos-Ioannidis DG. Replication validity of genetic association studies. Nat Genet. 2001;29:306–309."}'), + ('00000000-0000-0000-4444-FFF000000003', null, 5, '{"unstructured":"Colhoun HM, McKeigue PM, Davey Smith G. Problems of reporting genetic associations with complex outcomes. Lancet. 2003;361:865–872."}'); + +INSERT INTO file_rev_release (file_rev, target_release_ident_id) VALUES + ('00000000-0000-0000-3333-FFF000000002', '00000000-0000-0000-4444-000000000002'), + ('00000000-0000-0000-3333-FFF000000003', '00000000-0000-0000-4444-000000000003'); + +INSERT INTO fileset_rev_release (fileset_rev, target_release_ident_id) VALUES + ('00000000-0000-0000-6666-FFF000000002', '00000000-0000-0000-4444-000000000002'), + ('00000000-0000-0000-6666-FFF000000003', '00000000-0000-0000-4444-000000000003'); + +INSERT INTO webcapture_rev_release (webcapture_rev, target_release_ident_id) VALUES + ('00000000-0000-0000-7777-FFF000000002', '00000000-0000-0000-4444-000000000002'), + ('00000000-0000-0000-7777-FFF000000003', '00000000-0000-0000-4444-000000000003'); + +commit; |