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authorBryan Newbold <bnewbold@robocracy.org>2018-11-12 23:37:28 -0800
committerBryan Newbold <bnewbold@robocracy.org>2018-11-12 23:37:28 -0800
commit7ebda2e051b51e49544ab75673b19ec5f27d9d45 (patch)
tree671fd995b2fdb0b9ec69cfcb0e7771f43c13d32d /python/fatcat_tools/transforms.py
parent889606ffac5096610e6123134cb89423c15ef464 (diff)
downloadfatcat-7ebda2e051b51e49544ab75673b19ec5f27d9d45.tar.gz
fatcat-7ebda2e051b51e49544ab75673b19ec5f27d9d45.zip
more python module refactoring
Diffstat (limited to 'python/fatcat_tools/transforms.py')
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diff --git a/python/fatcat_tools/transforms.py b/python/fatcat_tools/transforms.py
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+
+import collections
+from fatcat_client.models import ReleaseEntity
+from fatcat_client.api_client import ApiClient
+
+def entity_to_json(entity):
+ ac = ApiClient()
+ return ac.sanitize_for_serialization(entity)
+
+def entity_from_json(json_str, entity_type):
+ """
+ Hack to take advantage of the code-generated deserialization code
+ """
+ ac = ApiClient()
+ thing = collections.namedtuple('Thing', ['data'])
+ thing.data = json_str
+ return ac.deserialize(thing, entity_type)
+
+def release_elastic_dict(release):
+ """
+ Converts from an entity model/schema to elasticsearch oriented schema.
+
+ Returns: dict
+ """
+
+ if release.state != 'active':
+ raise ValueError("Entity is not 'active'")
+
+ # First, the easy ones (direct copy)
+ t = dict(
+ ident = release.ident,
+ revision = release.revision,
+ title = release.title,
+ release_type = release.release_type,
+ release_status = release.release_status,
+ language = release.language,
+ doi = release.doi,
+ pmid = release.pmid,
+ pmcid = release.pmcid,
+ isbn13 = release.isbn13,
+ core_id = release.core_id,
+ wikidata_qid = release.wikidata_qid
+ )
+
+ if release.release_date:
+ # TODO: resolve why this can be either a string or datetime
+ if type(release.release_date) == str:
+ t['release_date'] = release.release_date
+ else:
+ t['release_date'] = release.release_date.strftime('%F')
+
+ container = release.container
+ container_is_kept = False
+ if container:
+ t['publisher'] = container.publisher
+ t['container_name'] = container.name
+ t['container_issnl'] = container.issnl
+ container_extra = container.extra
+ if container_extra:
+ t['container_is_oa'] = container_extra.get('is_oa')
+ container_is_kept = container_extra.get('is_kept', False)
+ t['container_is_longtail_oa'] = container_extra.get('is_longtail_oa')
+ else:
+ t['publisher'] = release.publisher
+
+ files = release.files or []
+ t['file_count'] = len(files)
+ in_wa = False
+ in_ia = False
+ t['file_pdf_url'] = None
+ for f in files:
+ is_pdf = 'pdf' in f.get('mimetype', '')
+ for url in f.get('urls', []):
+ if url.get('rel', '') == 'webarchive':
+ in_wa = True
+ if '//web.archive.org/' in url['url'] or '//archive.org/' in url['url']:
+ in_ia = True
+ if is_pdf:
+ t['file_pdf_url'] = url['url']
+ if not t['file_pdf_url'] and is_pdf:
+ t['file_pdf_url'] = url['url']
+ t['file_in_webarchive'] = in_wa
+ t['file_in_ia'] = in_ia
+
+ extra = release.extra or dict()
+ if extra:
+ t['in_shadow'] = extra.get('in_shadow')
+ if extra.get('grobid') and extra['grobid'].get('is_longtail_oa'):
+ t['container_is_longtail_oa'] = True
+ t['any_abstract'] = bool(release.abstracts)
+ t['is_kept'] = container_is_kept or extra.get('is_kept', False)
+
+ t['ref_count'] = len(release.refs or [])
+ t['contrib_count'] = len(release.contribs or [])
+ contrib_names = []
+ for c in (release.contribs or []):
+ if c.raw_name:
+ contrib_names.append(c.raw_name)
+ t['contrib_names'] = contrib_names
+ return t