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| author | Bryan Newbold <bnewbold@robocracy.org> | 2019-05-29 18:34:11 -0700 |
|---|---|---|
| committer | Bryan Newbold <bnewbold@robocracy.org> | 2019-05-29 18:34:11 -0700 |
| commit | eaf5039116fbde796d9905c4986fc6a308a36ff4 (patch) | |
| tree | ff73d47b15232d85a96d0c32e19691415298ea8f /python/README_import.md | |
| parent | 57c05973ed8e9648bcd95dcf0a43f64d4fe697d1 (diff) | |
| download | fatcat-eaf5039116fbde796d9905c4986fc6a308a36ff4.tar.gz fatcat-eaf5039116fbde796d9905c4986fc6a308a36ff4.zip | |
fix 'fd' XML pattern for bulk imports
Diffstat (limited to 'python/README_import.md')
| -rw-r--r-- | python/README_import.md | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/python/README_import.md b/python/README_import.md index 027ce7ad..43100db1 100644 --- a/python/README_import.md +++ b/python/README_import.md @@ -79,7 +79,7 @@ Single file: Bulk (one file per process): - fd .xml /srv/fatcat/datasets/arxiv_raw_oai_snapshot_2019-05-22/ | parallel -j15 ./fatcat_import.py arxiv {} + fd '.xml$' /srv/fatcat/datasets/arxiv_raw_oai_snapshot_2019-05-22/ | parallel -j15 ./fatcat_import.py arxiv {} ## PubMed @@ -93,8 +93,7 @@ Run single: Bulk: - # very memory intensive to parse these big XML files, so need to limit parallelism - fd .xml /srv/fatcat/datasets/pubmed_medline_baseline_2019 | time parallel -j3 ./fatcat_import.py pubmed {} /srv/fatcat/datasets/ISSN-to-ISSN-L.txt + fd '.xml$' /srv/fatcat/datasets/pubmed_medline_baseline_2019 | time parallel -j16 ./fatcat_import.py pubmed {} /srv/fatcat/datasets/ISSN-to-ISSN-L.txt ## Matched |