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authorBryan Newbold <bnewbold@robocracy.org>2021-11-29 14:34:02 -0800
committerBryan Newbold <bnewbold@robocracy.org>2021-11-29 14:34:02 -0800
commitc32154f2875a7fb9aac727013e1475cdd811e180 (patch)
treef0e061498a101fa824995fb6ec9f91e7e44257e1 /notes/bulk_edits/2021-05-28_dblp.md
parentc5ea2dba358624f4c14da0a1a988ae14d0edfd59 (diff)
downloadfatcat-c32154f2875a7fb9aac727013e1475cdd811e180.tar.gz
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-
-## Container Import
-
-Following dblp README directions:
-
- export DBLP_DIR=/srv/fatcat/tasks/202105_dblp
-
- ./fatcat_import.py dblp-release $DBLP_DIR/dblp.xml --dump-json-mode | pv -l > $DBLP_DIR/dblp_releases.json
- => Counter({'total': 8328073, 'skip': 8328073, 'has-doi': 4478439, 'skip-key-type': 2764750, 'skip-arxiv-corr': 348766, 'skip-title': 1, 'insert': 0, 'update': 0, 'exists': 0})
- => 5.21M 3:38:35 [ 397 /s]
-
- cat $DBLP_DIR/dblp_releases.json | jq ._dblp_prefix -r | grep -v ^null | sort -u > $DBLP_DIR/prefix_list.txt
-
- wc -l $DBLP_DIR/prefix_list.txt
- => 7603 /srv/fatcat/tasks/202105_dblp/prefix_list.txt
-
- mkdir -p journals
- mkdir -p conf
- mkdir -p series
-
- shuf $DBLP_DIR/prefix_list.txt | pv -l | parallel -j1 wget -nc -q "https://dblp.org/db/{}/index.html" -O {}.html
-
- # switch to temporary selectolax pipenv
- fd html conf/ journals/ series/ | /srv/fatcat/src/extra/dblp/dblp_html_extract.py | pv -l > dblp_container_meta.json
- => 7.08k 0:00:15 [ 449 /s]
-
- fatcat-cli search containers dblp_prefix:* -n 0 --index-json | jq "[.dblp_prefix, .ident] | @tsv" -r | pv -l > existing_dblp_containers.tsv
- => Got 5202 hits in 47ms
- => 5.20k 0:00:13 [ 375 /s]
-
- ./fatcat_import.py dblp-container --issn-map-file /srv/fatcat/datasets/ISSN-to-ISSN-L.txt --dblp-container-map-file $DBLP_DIR/existing_dblp_containers.tsv --dblp-container-map-output $DBLP_DIR/all_dblp_containers.tsv $DBLP_DIR/dblp_container_meta.json
- => Counter({'total': 7083, 'exists': 7025, 'insert': 58, 'skip': 0, 'update': 0})
- => actually 108 inserted
-
-Actually imported 50 more before this, then Ctrl-C to check. Then re-did
-fatcat-cli query, upload, and re-ran all. So 108 new containers inserted.
-
-## Release Import
-
-With same exports as above:
-
- ./fatcat_import.py dblp-release --dblp-container-map-file $DBLP_DIR/all_dblp_containers.tsv $DBLP_DIR/dblp.xml
- => Counter({'total': 8328073, 'exists': 4847353, 'has-doi': 4478439, 'skip': 3259925, 'skip-key-type': 2764750, 'skip-arxiv-corr': 348766, 'exists-fuzzy': 202880, 'skip-dblp-container-missing': 146408, 'insert': 17862, 'skip-arxiv': 53, 'skip-title': 1, 'update': 0})
-