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-- Tries to filter down a large CDX file to a subset that is likely to be
-- journal article content, based on SURT regex patterns.
---
-- Author: Bryan Newbold <bnewbold@archive.org>
-- Date: May 2018


%default INPUT ''
%default OUTPUT ''

set mapreduce.job.queuename default

cdx = LOAD '$INPUT' AS cdxline:chararray;
cdx = FILTER cdx BY not STARTSWITH (cdxline, 'filedesc');
cdx = FILTER cdx BY not STARTSWITH (cdxline, ' ');

cdx = FOREACH cdx GENERATE STRSPLIT(cdxline,'\\s+') as cols, cdxline;
cdx = FOREACH cdx GENERATE (chararray)cols.$0 as surt, (chararray)cols.$1 as timestamp, (chararray)cols.$3 as mimetype, (chararray)cols.$4 as httpstatus, (chararray)cols.$5 as sha1sum, cdxline;
cdx = FILTER cdx BY not surt matches '-';
cdx = FILTER cdx BY httpstatus matches '200';
cdx = FILTER cdx BY mimetype matches '.*pdf.*';

-- This is the core regex
cdx = FILTER cdx
        -- academic domains; personal (tilde) directories
        BY surt matches '(edu,|..,edu|..,ac,).*\\).*\\/~.*'

        -- words in URL
        OR surt matches '(?i).+\\).*/(pubs|research|publications?|articles?|proceedings?|papers?|fulltext)/.*'

        -- words in domains 
        OR surt matches '.*(,hal|,eprint|,ojs|,dspace|scielo|redalyc|revues|revistas|research|journal).*\\).*'

        -- DOI-like pattern in URL
        OR surt matches '.*\\).*/10\\.\\d{3,5}/.*';

-- DISTINCT by sha1 column
cdx_uniq = FOREACH (GROUP cdx BY sha1sum) {
    r = TOP(1, 0, $1);
    GENERATE FLATTEN(r);
};

cdx_uniq = ORDER cdx_uniq by surt, timestamp PARALLEL 50;
cdx_uniq = FOREACH cdx_uniq GENERATE cdxline;
STORE cdx_uniq INTO '$OUTPUT' USING PigStorage(' ');