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authorBryan Newbold <bnewbold@robocracy.org>2020-11-17 15:48:33 -0800
committerBryan Newbold <bnewbold@robocracy.org>2020-11-19 14:55:14 -0800
commit0fb0c3759a04c025800e3175fb4cbd8d595f8c4b (patch)
tree974a522ed63edb715fd0090a9bad1f3f03cfaf0a /rust
parent89016d99a20269c1a576bd4c7673f83af55e8218 (diff)
downloadfatcat-0fb0c3759a04c025800e3175fb4cbd8d595f8c4b.tar.gz
fatcat-0fb0c3759a04c025800e3175fb4cbd8d595f8c4b.zip
rust: fatcatd changes for DOAJ+dblp identifiers
Diffstat (limited to 'rust')
-rw-r--r--rust/Cargo.lock1873
-rw-r--r--rust/Cargo.toml2
-rw-r--r--rust/src/endpoint_handlers.rs63
-rw-r--r--rust/src/endpoints.rs4
-rw-r--r--rust/src/entity_crud.rs20
-rw-r--r--rust/src/identifiers.rs49
6 files changed, 1062 insertions, 949 deletions
diff --git a/rust/Cargo.lock b/rust/Cargo.lock
index 47748366..6bd42699 100644
--- a/rust/Cargo.lock
+++ b/rust/Cargo.lock
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-"checksum unicode-xid 0.0.4 (registry+https://github.com/rust-lang/crates.io-index)" = "8c1f860d7d29cf02cb2f3f359fd35991af3d30bac52c57d265a3c461074cb4dc"
-"checksum unicode-xid 0.1.0 (registry+https://github.com/rust-lang/crates.io-index)" = "fc72304796d0818e357ead4e000d19c9c174ab23dc11093ac919054d20a6a7fc"
-"checksum unreachable 1.0.0 (registry+https://github.com/rust-lang/crates.io-index)" = "382810877fe448991dfc7f0dd6e3ae5d58088fd0ea5e35189655f84e6814fa56"
-"checksum unsafe-any 0.4.2 (registry+https://github.com/rust-lang/crates.io-index)" = "f30360d7979f5e9c6e6cea48af192ea8fab4afb3cf72597154b8f08935bc9c7f"
-"checksum url 0.2.38 (registry+https://github.com/rust-lang/crates.io-index)" = "cbaa8377a162d88e7d15db0cf110c8523453edcbc5bc66d2b6fffccffa34a068"
-"checksum url 1.7.2 (registry+https://github.com/rust-lang/crates.io-index)" = "dd4e7c0d531266369519a4aa4f399d748bd37043b00bde1e4ff1f60a120b355a"
-"checksum url_serde 0.2.0 (registry+https://github.com/rust-lang/crates.io-index)" = "74e7d099f1ee52f823d4bdd60c93c3602043c728f5db3b97bdb548467f7bddea"
-"checksum urlencoded 0.6.0 (registry+https://github.com/rust-lang/crates.io-index)" = "0a52f50139118b60ae91af08bf15ed158817d34b91b9d24c11ffbe21195d33e3"
-"checksum utf8-ranges 1.0.2 (registry+https://github.com/rust-lang/crates.io-index)" = "796f7e48bef87609f7ade7e06495a87d5cd06c7866e6a5cbfceffc558a243737"
-"checksum uuid 0.1.18 (registry+https://github.com/rust-lang/crates.io-index)" = "78c590b5bd79ed10aad8fb75f078a59d8db445af6c743e55c4a53227fc01c13f"
-"checksum uuid 0.5.1 (registry+https://github.com/rust-lang/crates.io-index)" = "bcc7e3b898aa6f6c08e5295b6c89258d1331e9ac578cc992fb818759951bdc22"
-"checksum uuid 0.6.5 (registry+https://github.com/rust-lang/crates.io-index)" = "e1436e58182935dcd9ce0add9ea0b558e8a87befe01c1a301e6020aeb0876363"
-"checksum uuid 0.7.2 (registry+https://github.com/rust-lang/crates.io-index)" = "0238db0c5b605dd1cf51de0f21766f97fba2645897024461d6a00c036819a768"
-"checksum vcpkg 0.2.6 (registry+https://github.com/rust-lang/crates.io-index)" = "def296d3eb3b12371b2c7d0e83bfe1403e4db2d7a0bba324a12b21c4ee13143d"
-"checksum vec_map 0.8.1 (registry+https://github.com/rust-lang/crates.io-index)" = "05c78687fb1a80548ae3250346c3db86a80a7cdd77bda190189f2d0a0987c81a"
-"checksum version_check 0.1.5 (registry+https://github.com/rust-lang/crates.io-index)" = "914b1a6776c4c929a602fafd8bc742e06365d4bcbe48c30f9cca5824f70dc9dd"
-"checksum void 1.0.2 (registry+https://github.com/rust-lang/crates.io-index)" = "6a02e4885ed3bc0f2de90ea6dd45ebcbb66dacffe03547fadbb0eeae2770887d"
-"checksum want 0.0.6 (registry+https://github.com/rust-lang/crates.io-index)" = "797464475f30ddb8830cc529aaaae648d581f99e2036a928877dfde027ddf6b3"
-"checksum winapi 0.2.8 (registry+https://github.com/rust-lang/crates.io-index)" = "167dc9d6949a9b857f3451275e911c3f44255842c1f7a76f33c55103a909087a"
-"checksum winapi 0.3.6 (registry+https://github.com/rust-lang/crates.io-index)" = "92c1eb33641e276cfa214a0522acad57be5c56b10cb348b3c5117db75f3ac4b0"
-"checksum winapi-build 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)" = "2d315eee3b34aca4797b2da6b13ed88266e6d612562a0c46390af8299fc699bc"
-"checksum winapi-i686-pc-windows-gnu 0.4.0 (registry+https://github.com/rust-lang/crates.io-index)" = "ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6"
-"checksum winapi-util 0.1.2 (registry+https://github.com/rust-lang/crates.io-index)" = "7168bab6e1daee33b4557efd0e95d5ca70a03706d39fa5f3fe7a236f584b03c9"
-"checksum winapi-x86_64-pc-windows-gnu 0.4.0 (registry+https://github.com/rust-lang/crates.io-index)" = "712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f"
-"checksum wincolor 1.0.1 (registry+https://github.com/rust-lang/crates.io-index)" = "561ed901ae465d6185fa7864d63fbd5720d0ef718366c9a4dc83cf6170d7e9ba"
-"checksum ws2_32-sys 0.2.1 (registry+https://github.com/rust-lang/crates.io-index)" = "d59cefebd0c892fa2dd6de581e937301d8552cb44489cdff035c6187cb63fa5e"
+ "winapi 0.2.8",
+ "winapi-build",
+]
diff --git a/rust/Cargo.toml b/rust/Cargo.toml
index 3b84df22..0290492a 100644
--- a/rust/Cargo.toml
+++ b/rust/Cargo.toml
@@ -1,6 +1,6 @@
[package]
name = "fatcat"
-version = "0.3.1"
+version = "0.3.3"
edition = "2018"
authors = ["Bryan Newbold <bnewbold@archive.org>"]
description = "A scalable, versioned, API-oriented catalog for bibliographic entities and file metadata"
diff --git a/rust/src/endpoint_handlers.rs b/rust/src/endpoint_handlers.rs
index 64b6ed62..cc717344 100644
--- a/rust/src/endpoint_handlers.rs
+++ b/rust/src/endpoint_handlers.rs
@@ -262,6 +262,8 @@ impl Server {
jstor: &Option<String>,
ark: &Option<String>,
mag: &Option<String>,
+ doaj: &Option<String>,
+ dblp: &Option<String>,
expand_flags: ExpandFlags,
hide_flags: HideFlags,
) -> Result<ReleaseEntity> {
@@ -276,8 +278,10 @@ impl Server {
jstor,
ark,
mag,
+ doaj,
+ dblp,
) {
- (Some(doi), None, None, None, None, None, None, None, None, None) => {
+ (Some(doi), None, None, None, None, None, None, None, None, None, None, None) => {
// DOIs always stored lower-case; lookups are case-insensitive
let doi = doi.to_lowercase();
check_doi(&doi)?;
@@ -288,7 +292,20 @@ impl Server {
.filter(release_ident::redirect_id.is_null())
.first(conn)?
}
- (None, Some(wikidata_qid), None, None, None, None, None, None, None, None) => {
+ (
+ None,
+ Some(wikidata_qid),
+ None,
+ None,
+ None,
+ None,
+ None,
+ None,
+ None,
+ None,
+ None,
+ None,
+ ) => {
check_wikidata_qid(wikidata_qid)?;
release_ident::table
.inner_join(release_rev::table)
@@ -297,7 +314,7 @@ impl Server {
.filter(release_ident::redirect_id.is_null())
.first(conn)?
}
- (None, None, Some(isbn13), None, None, None, None, None, None, None) => {
+ (None, None, Some(isbn13), None, None, None, None, None, None, None, None, None) => {
check_isbn13(isbn13)?;
let (rev, ident, _extid): (ReleaseRevRow, ReleaseIdentRow, ReleaseExtidRow) =
release_rev::table
@@ -310,7 +327,7 @@ impl Server {
.first(conn)?;
(ident, rev)
}
- (None, None, None, Some(pmid), None, None, None, None, None, None) => {
+ (None, None, None, Some(pmid), None, None, None, None, None, None, None, None) => {
check_pmid(pmid)?;
release_ident::table
.inner_join(release_rev::table)
@@ -319,7 +336,7 @@ impl Server {
.filter(release_ident::redirect_id.is_null())
.first(conn)?
}
- (None, None, None, None, Some(pmcid), None, None, None, None, None) => {
+ (None, None, None, None, Some(pmcid), None, None, None, None, None, None, None) => {
check_pmcid(pmcid)?;
release_ident::table
.inner_join(release_rev::table)
@@ -328,7 +345,7 @@ impl Server {
.filter(release_ident::redirect_id.is_null())
.first(conn)?
}
- (None, None, None, None, None, Some(core), None, None, None, None) => {
+ (None, None, None, None, None, Some(core), None, None, None, None, None, None) => {
check_core_id(core)?;
release_ident::table
.inner_join(release_rev::table)
@@ -337,7 +354,7 @@ impl Server {
.filter(release_ident::redirect_id.is_null())
.first(conn)?
}
- (None, None, None, None, None, None, Some(arxiv), None, None, None) => {
+ (None, None, None, None, None, None, Some(arxiv), None, None, None, None, None) => {
// TODO: this allows only lookup by full, versioned arxiv identifier. Probably also
// want to allow lookup by "work" style identifier?
check_arxiv_id(arxiv)?;
@@ -352,7 +369,7 @@ impl Server {
.first(conn)?;
(ident, rev)
}
- (None, None, None, None, None, None, None, Some(jstor), None, None) => {
+ (None, None, None, None, None, None, None, Some(jstor), None, None, None, None) => {
check_jstor_id(jstor)?;
let (rev, ident, _extid): (ReleaseRevRow, ReleaseIdentRow, ReleaseExtidRow) =
release_rev::table
@@ -365,7 +382,7 @@ impl Server {
.first(conn)?;
(ident, rev)
}
- (None, None, None, None, None, None, None, None, Some(ark), None) => {
+ (None, None, None, None, None, None, None, None, Some(ark), None, None, None) => {
check_ark_id(ark)?;
let (rev, ident, _extid): (ReleaseRevRow, ReleaseIdentRow, ReleaseExtidRow) =
release_rev::table
@@ -378,7 +395,7 @@ impl Server {
.first(conn)?;
(ident, rev)
}
- (None, None, None, None, None, None, None, None, None, Some(mag)) => {
+ (None, None, None, None, None, None, None, None, None, Some(mag), None, None) => {
check_mag_id(mag)?;
let (rev, ident, _extid): (ReleaseRevRow, ReleaseIdentRow, ReleaseExtidRow) =
release_rev::table
@@ -391,6 +408,32 @@ impl Server {
.first(conn)?;
(ident, rev)
}
+ (None, None, None, None, None, None, None, None, None, None, Some(doaj), None) => {
+ check_doaj_id(doaj)?;
+ let (rev, ident, _extid): (ReleaseRevRow, ReleaseIdentRow, ReleaseExtidRow) =
+ release_rev::table
+ .inner_join(release_ident::table)
+ .inner_join(release_rev_extid::table)
+ .filter(release_rev_extid::extid_type.eq("doaj".to_string()))
+ .filter(release_rev_extid::value.eq(doaj))
+ .filter(release_ident::is_live.eq(true))
+ .filter(release_ident::redirect_id.is_null())
+ .first(conn)?;
+ (ident, rev)
+ }
+ (None, None, None, None, None, None, None, None, None, None, None, Some(dblp)) => {
+ check_dblp_id(dblp)?;
+ let (rev, ident, _extid): (ReleaseRevRow, ReleaseIdentRow, ReleaseExtidRow) =
+ release_rev::table
+ .inner_join(release_ident::table)
+ .inner_join(release_rev_extid::table)
+ .filter(release_rev_extid::extid_type.eq("dblp".to_string()))
+ .filter(release_rev_extid::value.eq(dblp))
+ .filter(release_ident::is_live.eq(true))
+ .filter(release_ident::redirect_id.is_null())
+ .first(conn)?;
+ (ident, rev)
+ }
_ => {
return Err(
FatcatError::MissingOrMultipleExternalId("in lookup".to_string()).into(),
diff --git a/rust/src/endpoints.rs b/rust/src/endpoints.rs
index 0dd69efd..fda4688c 100644
--- a/rust/src/endpoints.rs
+++ b/rust/src/endpoints.rs
@@ -689,6 +689,8 @@ impl Api for Server {
jstor: Option<String>,
ark: Option<String>,
mag: Option<String>,
+ doaj: Option<String>,
+ dblp: Option<String>,
expand: Option<String>,
hide: Option<String>,
_context: &Context,
@@ -716,6 +718,8 @@ impl Api for Server {
&jstor,
&ark,
&mag,
+ &doaj,
+ &dblp,
expand_flags,
hide_flags,
)
diff --git a/rust/src/entity_crud.rs b/rust/src/entity_crud.rs
index 83dd26c9..89ee83bf 100644
--- a/rust/src/entity_crud.rs
+++ b/rust/src/entity_crud.rs
@@ -1742,6 +1742,8 @@ impl EntityCrud for ReleaseEntity {
jstor: None,
ark: None,
mag: None,
+ doaj: None,
+ dblp: None,
},
refs: None,
contribs: None,
@@ -2018,6 +2020,8 @@ impl EntityCrud for ReleaseEntity {
jstor: None,
ark: None,
mag: None,
+ doaj: None,
+ dblp: None,
};
let extid_rows: Vec<ReleaseExtidRow> = release_rev_extid::table
@@ -2030,6 +2034,8 @@ impl EntityCrud for ReleaseEntity {
"jstor" => ext_ids.jstor = Some(extid_row.value),
"ark" => ext_ids.ark = Some(extid_row.value),
"mag" => ext_ids.mag = Some(extid_row.value),
+ "doaj" => ext_ids.doaj = Some(extid_row.value),
+ "dblp" => ext_ids.dblp = Some(extid_row.value),
_ => (),
}
}
@@ -2290,6 +2296,20 @@ impl EntityCrud for ReleaseEntity {
value: extid.clone(),
});
};
+ if let Some(extid) = &model.ext_ids.doaj {
+ release_extid_rows.push(ReleaseExtidRow {
+ release_rev: *rev_id,
+ extid_type: "doaj".to_string(),
+ value: extid.clone(),
+ });
+ };
+ if let Some(extid) = &model.ext_ids.dblp {
+ release_extid_rows.push(ReleaseExtidRow {
+ release_rev: *rev_id,
+ extid_type: "dblp".to_string(),
+ value: extid.clone(),
+ });
+ };
}
for (model, rev_id) in models.iter().zip(rev_ids.iter()) {
diff --git a/rust/src/identifiers.rs b/rust/src/identifiers.rs
index 180dc43b..22ffcc79 100644
--- a/rust/src/identifiers.rs
+++ b/rust/src/identifiers.rs
@@ -362,6 +362,55 @@ fn test_check_isbn13() {
assert!(check_isbn13("9781566199094").is_err());
}
+pub fn check_doaj_id(raw: &str) -> Result<()> {
+ lazy_static! {
+ static ref RE: Regex = Regex::new(r"^[a-f0-9]{32}$").unwrap();
+ }
+ if raw.is_ascii() && RE.is_match(raw) {
+ Ok(())
+ } else {
+ Err(FatcatError::MalformedChecksum(
+ "DOAJ Article Identifier (expected, eg, 'e58f08a11ecb495ead55a44ad4f89808')"
+ .to_string(),
+ raw.to_string(),
+ ))?
+ }
+}
+
+#[test]
+fn test_check_doaj_id() {
+ assert!(check_doaj_id("e58f08a11ecb495ead55a44ad4f89808").is_ok());
+ assert!(check_doaj_id("1b39813549077b2347c0f370c3864b40").is_ok());
+ assert!(check_doaj_id("1b39813549077b2347c0f370c3864b40 ").is_err());
+ assert!(check_doaj_id("1g39813549077b2347c0f370c3864b40").is_err());
+ assert!(check_doaj_id("1B39813549077B2347C0F370c3864b40").is_err());
+ assert!(check_doaj_id("1b39813549077b2347c0f370c3864b4").is_err());
+ assert!(check_doaj_id("1b39813549077b2347c0f370c3864b411").is_err());
+}
+
+pub fn check_dblp_id(raw: &str) -> Result<()> {
+ lazy_static! {
+ // TODO: what should this actually be? more or less restrictive?
+ static ref RE: Regex = Regex::new(r"^[a-z]+/[a-zA-Z0-9]+/[a-zA-Z0-9/]+$").unwrap();
+ }
+ if raw.is_ascii() && RE.is_match(raw) {
+ Ok(())
+ } else {
+ Err(FatcatError::MalformedChecksum(
+ "dblp Article Key (expected, eg, 'journals/entcs/GoubaultM12')".to_string(),
+ raw.to_string(),
+ ))?
+ }
+}
+
+#[test]
+fn test_check_dblp_id() {
+ assert!(check_dblp_id("journals/entcs/GoubaultM12").is_ok());
+ assert!(check_dblp_id("journals/entcs/GoubaultM12").is_ok());
+ assert!(check_dblp_id("10.123*").is_err());
+ assert!(check_dblp_id("").is_err());
+}
+
pub fn check_issn(raw: &str) -> Result<()> {
lazy_static! {
static ref RE: Regex = Regex::new(r"^\d{4}-\d{3}[0-9X]$").unwrap();