From 46c422e4b6d8e6a36ea65af19afd124ab42e457c Mon Sep 17 00:00:00 2001 From: Bryan Newbold Date: Thu, 28 May 2020 14:27:41 -0700 Subject: blobs: start documenting seaweedfs backfill --- blobs/tasks.md | 53 +++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 53 insertions(+) create mode 100644 blobs/tasks.md (limited to 'blobs') diff --git a/blobs/tasks.md b/blobs/tasks.md new file mode 100644 index 0000000..34dec8f --- /dev/null +++ b/blobs/tasks.md @@ -0,0 +1,53 @@ + +## Backfill GROBID XML to Blob Store + +Initially ran this when spinning up new seaweedfs server to replace minio. At +this time grobid persist worker was in db-only mode, as minio was too slow to +accept uploads. Rough plan is to: + +1. run grobid persist worker from Kafka with a new temporary consumer group, + from the start of the GROBID output topic +2. when it gets to end, stop the *regular* consumer group while this one is + still running. with temporary worker still running, at that point in time + entire topic should be in S3 +3. then reconfigure regular worker to db+s3 mode. halt the temporary worker, + restart the regular one with new config, run it indefinitely + +Consumer group isn't an arg, so just edit `persist_worker.py` and set it to +`persist-grobid-seaweedfs`. Also needed to patch a bit so `--s3-only` mode +didn't try to connect to postgresql. + +Commands: + + ./sandcrawler_worker.py --kafka-hosts wbgrp-svc263.us.archive.org:9092 --env prod --s3-bucket sandcrawler --s3-url wbgrp-svc169.us.archive.org:8333 persist-grobid --s3-only + => Consuming from kafka topic sandcrawler-prod.grobid-output-pg, group persist-grobid-seaweed + => run briefly, then kill + +On kafka-broker worker: + + ./kafka-consumer-groups.sh --bootstrap-server localhost:9092 --reset-offsets --to-earliest --group persist-grobid-seaweed --topic sandcrawler-prod.grobid-output-pg --dry-run + +Then run 2x instances of worker (same command as above): + + ./sandcrawler_worker.py --kafka-hosts wbgrp-svc263.us.archive.org:9092 --env prod --s3-bucket sandcrawler --s3-url wbgrp-svc169.us.archive.org:8333 persist-grobid --s3-only + +At this point CPU-limited on this worker by the python processes (only 4 cores +on this machine). + +Check in weed shell: + + weed shell + + > > fs.meta.cat buckets/sandcrawler/grobid/00/00/000068a76ab125389506e8834483c6ba4c73338a.tei.xml + [...] + "isGzipped": false + [...] + "mime": "application/xml", + [...] + +An open question is if we should have separate buckets per derive type. Eg, a +GROBID XML bucket separate from thumbnails bucket. Or are prefix directories +enough. Basically this comes down to whether we want things mixed together at +the volume level. I think we should keep separate. + +Need to set the mimetype in the upload for gzip on XML? -- cgit v1.2.3