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* | Merge branch 'bnewbold-worker-timeout' into 'master'bnewbold2020-04-293-2/+58
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| * | timeouts: don't push through None error messagesBryan Newbold2020-04-291-2/+2
| * | timeout message implementation for GROBID and ingest workersBryan Newbold2020-04-272-0/+18
| * | worker timeout wrapper, and use for kafkaBryan Newbold2020-04-271-2/+40
* | | NSQ for job task manager/schedulerBryan Newbold2020-04-281-0/+79
* | | update MAG crawl notesBryan Newbold2020-04-281-0/+71
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* | kafka: more reblance notesBryan Newbold2020-04-241-1/+14
* | CI: add missing libsnappy-dev and libsodium-dev system packagesBryan Newbold2020-04-241-1/+1
* | kafka: how to rebalance parititions between brokersBryan Newbold2020-04-241-0/+29
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* CI: add deadsnakes and python3.7Bryan Newbold2020-04-211-2/+3
* fix KeyError in HTML PDF URL extractionBryan Newbold2020-04-171-1/+1
* persist: only GROBID updates file_meta, not file-resultBryan Newbold2020-04-161-1/+1
* batch/multiprocess for ZipfilePusherBryan Newbold2020-04-162-5/+26
* update README for python3.7Bryan Newbold2020-04-151-1/+1
* pipenv: update to python3.7Bryan Newbold2020-04-152-197/+202
* COVID-19 chinese paper ingestBryan Newbold2020-04-152-0/+156
* 2020-04 unpaywall ingest (in progress)Bryan Newbold2020-04-151-0/+63
* 2020-04 datacite ingest (in progress)Bryan Newbold2020-04-151-0/+18
* partial notes on S2 crawl ingestBryan Newbold2020-04-151-0/+35
* ingest: quick hack to capture CNKI outlinksBryan Newbold2020-04-131-2/+9
* html: attempt at CNKI href extractionBryan Newbold2020-04-131-0/+11
* MAG import notesBryan Newbold2020-04-131-0/+13
* unpaywall2ingestrequest: canonicalize URLBryan Newbold2020-04-071-1/+9
* MAG 2020-03-04 ingest notes to dateBryan Newbold2020-04-061-0/+395
* more monitoring queriesBryan Newbold2020-03-301-5/+29
* unpaywall ingest notes updateBryan Newbold2020-03-301-0/+138
* ia: set User-Agent for replay fetch from waybackBryan Newbold2020-03-291-0/+5
* ingest: block another large domain (and DOI prefix)Bryan Newbold2020-03-271-0/+2
* ingest: better spn2 pending error codeBryan Newbold2020-03-271-0/+2
* ingest: eurosurveillance PDF parserBryan Newbold2020-03-251-0/+11
* ia: more conservative use of clean_url()Bryan Newbold2020-03-241-3/+5
* ingest: clean_url() in more placesBryan Newbold2020-03-233-1/+6
* Merge branch 'martin-pubmed-ftp-topic-docs' into 'master'bnewbold2020-03-201-1/+9
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| * topics: add pubmed ftp topicMartin Czygan2020-03-121-1/+9
* | skip-db option also for workerBryan Newbold2020-03-191-0/+4
* | persist grobid: add option to skip S3 uploadBryan Newbold2020-03-192-7/+14
* | ingest: log every URL (from ia code side)Bryan Newbold2020-03-181-0/+1
* | implement (unused) force_get flag for SPN2Bryan Newbold2020-03-182-4/+19
* | unpaywall large ingest notesBryan Newbold2020-03-171-0/+10
* | make monitoring commands ingest_request local, not ingest_file_resultBryan Newbold2020-03-171-2/+2
* | work around local redirect (resource.location)Bryan Newbold2020-03-171-1/+6
* | Merge branch 'martin-abstract-class-process' into 'master'bnewbold2020-03-121-0/+6
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| * | workers: add explicit process to base classMartin Czygan2020-03-121-0/+6
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* | pipenv: work around zipp issueBryan Newbold2020-03-102-4/+16
* | pipenv: add urlcanon; update pipefile.lockBryan Newbold2020-03-102-209/+221
* | DOI prefix example queries (SQL)Bryan Newbold2020-03-101-3/+17
* | use local env in python scriptsBryan Newbold2020-03-103-3/+3
* | url cleaning (canonicalization) for ingest base_urlBryan Newbold2020-03-104-4/+21
* | ingest_file: --no-spn2 flag for single commandBryan Newbold2020-03-101-1/+6
* | helpful daily/weekly monitoring SQL queriesBryan Newbold2020-03-101-0/+94
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