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* codespell fixes in proposalsBryan Newbold2021-11-248-16/+16
* ingest tool: new backfill modeBryan Newbold2021-11-161-0/+76
* make fmtBryan Newbold2021-11-161-1/+1
* SPNv2: make 'resources' optionalBryan Newbold2021-11-161-1/+1
* grobid: handle XML parsing errors, and have them recorded in sandcrawler-dbBryan Newbold2021-11-121-1/+5
* ingest_file: more efficient GROBID metadata copyBryan Newbold2021-11-121-3/+3
* wrap up crossref refs backfill notesBryan Newbold2021-11-101-0/+47
* grobid_tool: helper to process a single fileBryan Newbold2021-11-101-0/+15
* ingest: start re-processing GROBID with newer versionBryan Newbold2021-11-101-2/+6
* simple persist worker/tool to backfill grobid_refsBryan Newbold2021-11-102-0/+62
* grobid: extract more metadata in document TEI-XMLBryan Newbold2021-11-101-0/+5
* grobid: update 'TODO' comment based on reviewBryan Newbold2021-11-041-3/+0
* update crossref/grobid refs generation notesBryan Newbold2021-11-041-4/+96
* crossref grobid refs: another error case (ReadTimeout)Bryan Newbold2021-11-042-5/+11
* db (postgrest): actually use an HTTP sessionBryan Newbold2021-11-041-12/+24
* grobid: use requests sessionBryan Newbold2021-11-041-3/+4
* grobid crossref refs: try to handle HTTP 5xx and XML parse errorsBryan Newbold2021-11-042-5/+33
* grobid: handle weird whitespace unstructured from crossrefBryan Newbold2021-11-041-1/+10
* crossref persist: batch size depends on whether parsing refsBryan Newbold2021-11-042-2/+8
* sql: grobid_refs table JSON as 'JSON' not 'JSONB'Bryan Newbold2021-11-042-3/+3
* grobid refs backfill progressBryan Newbold2021-11-041-1/+43
* record SQL table sizes at start of crossref re-ingestBryan Newbold2021-11-041-0/+19
* start notes on crossref refs backfillBryan Newbold2021-11-041-0/+54
* crossref persist: make GROBID ref parsing an option (not default)Bryan Newbold2021-11-043-9/+33
* add grobid_refs and crossref_with_refs to sandcrawler-db SQL schemaBryan Newbold2021-11-041-0/+21
* glue, utils, and worker code for crossref and grobid_refsBryan Newbold2021-11-044-5/+212
* update grobid refs proposalBryan Newbold2021-11-041-10/+72
* iterated GROBID citation cleaning and processingBryan Newbold2021-11-041-27/+45
* grobid citations: first pass at cleaning unstructuredBryan Newbold2021-11-041-2/+34
* initial proposal for GROBID refs table and pipelineBryan Newbold2021-11-041-0/+63
* initial crossref-refs via GROBID helper routineBryan Newbold2021-11-047-6/+839
* pipenv: bump grobid_tei_xml version to 0.1.2Bryan Newbold2021-11-042-11/+11
* pdftrio client: use HTTP session for POSTsBryan Newbold2021-11-031-1/+1
* workers: use HTTP session for archive.org fetchesBryan Newbold2021-11-031-3/+3
* IA (wayback): actually use an HTTP session for replay fetchesBryan Newbold2021-11-031-2/+3
* SPN reingest: 6 hour minimum, 6 month maxBryan Newbold2021-11-031-2/+2
* sql: fix typo in quarterly (not weekly) scriptBryan Newbold2021-11-031-1/+1
* sql: fixes to ingest_fileset_platform schema (from table creation)Bryan Newbold2021-11-012-12/+12
* updates/corrections to old small.json GROBID metadata example fileBryan Newbold2021-10-271-6/+1
* remove grobid2json helper file, replace with grobid_tei_xmlBryan Newbold2021-10-277-224/+22
* small type annotation things from additional packagesBryan Newbold2021-10-272-5/+14
* toolchain config updatesBryan Newbold2021-10-273-10/+6
* make fmt (black 21.9b0)Bryan Newbold2021-10-2757-3126/+3991
* pipenv: flipflop from yapf back to black; more type packages; bump grobid_tei...Bryan Newbold2021-10-272-27/+112
* fileset: refactor out tables of helpersBryan Newbold2021-10-273-21/+19
* gitlab-ci: copy env var in to place for testsBryan Newbold2021-10-271-0/+1
* fix type annotations for petabox body fetch helperBryan Newbold2021-10-265-8/+11
* small type annotation hackBryan Newbold2021-10-261-1/+1
* fileset: fix field renaming bug (caught by mypy)Bryan Newbold2021-10-261-2/+2
* fileset ingest: fix table name typo (via mypy)Bryan Newbold2021-10-261-1/+1
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