diff options
| -rwxr-xr-x | python/grobid2json.py | 1 | ||||
| -rwxr-xr-x | python/grobid_tool.py | 12 | ||||
| -rwxr-xr-x | python/ingest_file.py | 12 | ||||
| -rwxr-xr-x | python/kafka_grobid.py | 3 | ||||
| -rwxr-xr-x | python/sandcrawler_worker.py | 12 |
5 files changed, 27 insertions, 13 deletions
diff --git a/python/grobid2json.py b/python/grobid2json.py index 75fdcba..977c772 100755 --- a/python/grobid2json.py +++ b/python/grobid2json.py @@ -163,6 +163,7 @@ def teixml2json(content, encumbered=True): def main(): # pragma no cover parser = argparse.ArgumentParser( + formatter_class=argparse.ArgumentDefaultsHelpFormatter, description="GROBID TEI XML to JSON", usage="%(prog)s [options] <teifile>...") parser.add_argument("--no-encumbered", diff --git a/python/grobid_tool.py b/python/grobid_tool.py index f21d088..a8d5120 100755 --- a/python/grobid_tool.py +++ b/python/grobid_tool.py @@ -50,7 +50,8 @@ def run_extract_zipfile(args): pusher.run() def main(): - parser = argparse.ArgumentParser() + parser = argparse.ArgumentParser( + formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument('--kafka-mode', action='store_true', help="send output to Kafka (not stdout)") @@ -68,19 +69,22 @@ def main(): help="GROBID API host/port") subparsers = parser.add_subparsers() - sub_extract_json = subparsers.add_parser('extract-json') + sub_extract_json = subparsers.add_parser('extract-json', + help="for each JSON line with CDX info, fetches PDF and does GROBID extraction") sub_extract_json.set_defaults(func=run_extract_json) sub_extract_json.add_argument('json_file', help="JSON file to import from (or '-' for stdin)", type=argparse.FileType('r')) - sub_extract_cdx = subparsers.add_parser('extract-cdx') + sub_extract_cdx = subparsers.add_parser('extract-cdx', + help="for each CDX line, fetches PDF and does GROBID extraction") sub_extract_cdx.set_defaults(func=run_extract_cdx) sub_extract_cdx.add_argument('cdx_file', help="CDX file to import from (or '-' for stdin)", type=argparse.FileType('r')) - sub_extract_zipfile = subparsers.add_parser('extract-zipfile') + sub_extract_zipfile = subparsers.add_parser('extract-zipfile', + help="opens zipfile, iterates over PDF files inside and does GROBID extract for each") sub_extract_zipfile.set_defaults(func=run_extract_zipfile) sub_extract_zipfile.add_argument('zip_file', help="zipfile with PDFs to extract", diff --git a/python/ingest_file.py b/python/ingest_file.py index fcd2e94..1980e3d 100755 --- a/python/ingest_file.py +++ b/python/ingest_file.py @@ -34,13 +34,15 @@ def run_api(args): server.serve_forever() def main(): - parser = argparse.ArgumentParser() + parser = argparse.ArgumentParser( + formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument('--api-host-url', default="http://localhost:9411/v0", help="fatcat API host/port to use") subparsers = parser.add_subparsers() - sub_single= subparsers.add_parser('single') + sub_single= subparsers.add_parser('single', + help="ingests a single file URL") sub_single.set_defaults(func=run_single_ingest) sub_single.add_argument('--release-id', help="(optional) existing release ident to match to") @@ -49,13 +51,15 @@ def main(): sub_single.add_argument('url', help="URL of paper to fetch") - sub_requests = subparsers.add_parser('requests') + sub_requests = subparsers.add_parser('requests', + help="takes a series of ingest requests (JSON, per line) and runs each") sub_requests.set_defaults(func=run_requests) sub_requests.add_argument('json_file', help="JSON file (request per line) to import from (or stdin)", default=sys.stdin, type=argparse.FileType('r')) - sub_api = subparsers.add_parser('api') + sub_api = subparsers.add_parser('api', + help="starts a simple HTTP server that processes ingest requests") sub_api.set_defaults(func=run_api) sub_api.add_argument('--port', help="HTTP port to listen on", diff --git a/python/kafka_grobid.py b/python/kafka_grobid.py index 8d1bd2e..dd6ab63 100755 --- a/python/kafka_grobid.py +++ b/python/kafka_grobid.py @@ -295,7 +295,8 @@ class KafkaGrobidWorker: @sentry_client.capture_exceptions def main(): - parser = argparse.ArgumentParser() + parser = argparse.ArgumentParser( + formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument('--kafka-hosts', default="localhost:9092", help="list of Kafka brokers (host/port) to use") diff --git a/python/sandcrawler_worker.py b/python/sandcrawler_worker.py index 81aef5b..f314218 100755 --- a/python/sandcrawler_worker.py +++ b/python/sandcrawler_worker.py @@ -47,7 +47,8 @@ def run_ingest_file(args): pusher.run() def main(): - parser = argparse.ArgumentParser() + parser = argparse.ArgumentParser( + formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument('--kafka-hosts', default="localhost:9092", help="list of Kafka brokers (host/port) to use") @@ -59,13 +60,16 @@ def main(): help="GROBID API host/port") subparsers = parser.add_subparsers() - sub_grobid_extract = subparsers.add_parser('grobid-extract') + sub_grobid_extract = subparsers.add_parser('grobid-extract', + help="daemon that consumes CDX JSON objects from Kafka, extracts, pushes to Kafka") sub_grobid_extract.set_defaults(func=run_grobid_extract) - sub_grobid_persist = subparsers.add_parser('grobid-persist') + sub_grobid_persist = subparsers.add_parser('grobid-persist', + help="daemon that consumes GROBID output from Kafka and pushes to minio and postgres") sub_grobid_persist.set_defaults(func=run_grobid_persist) - sub_ingest_file = subparsers.add_parser('ingest-file') + sub_ingest_file = subparsers.add_parser('ingest-file', + help="daemon that consumes requests from Kafka, ingests, pushes results to Kafka") sub_ingest_file.set_defaults(func=run_ingest_file) args = parser.parse_args() |