From df126d7252bea6d3877cb67211a34f14788aa358 Mon Sep 17 00:00:00 2001 From: Martin Czygan Date: Thu, 5 Aug 2021 13:17:01 +0200 Subject: tasks: use a mapper --- python/refcat/tasks.py | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) (limited to 'python') diff --git a/python/refcat/tasks.py b/python/refcat/tasks.py index 573ec74..66175c8 100644 --- a/python/refcat/tasks.py +++ b/python/refcat/tasks.py @@ -448,8 +448,7 @@ class BrefDOITable(Refcat): def run(self): output = shellout(""" zstdcat -T0 {input} | - parallel --block 10M -j 20 --pipe - "jq -rc '[.source_release_ident, .target_release_ident, .source_doi, .target_doi] | @tsv'" | + skate-map -m bidt | zstd -c -T0 > {output} """, input=self.input().path) -- cgit v1.2.3