From 56390b40ce4d5a7e4d0f17a935cf6a9c3d950be6 Mon Sep 17 00:00:00 2001 From: Martin Czygan Date: Thu, 27 May 2021 16:21:48 +0200 Subject: fix typo --- python/refcat/tasks.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'python') diff --git a/python/refcat/tasks.py b/python/refcat/tasks.py index a471b1e..807b6fd 100644 --- a/python/refcat/tasks.py +++ b/python/refcat/tasks.py @@ -803,7 +803,7 @@ class UnmatchedMapped(Refcat): def run(self): output = shellout(""" zstdcat -T0 {input} | - skate-conf -f ref | + skate-conv -f ref | skate-map -m cns -skip-on-empty 1 | LC_ALL=C sort -T {tmpdir} -S25% -k1,1 --parallel 4 | zstd -T0 -c > {output} -- cgit v1.2.3