From 1f031bed6e0014bfe1f16eadd9be08f02a99ede4 Mon Sep 17 00:00:00 2001
From: Martin Czygan <martin.czygan@gmail.com>
Date: Mon, 24 May 2021 22:15:29 +0200
Subject: tasks: use cns mapper

---
 python/refcat/tasks.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'python')

diff --git a/python/refcat/tasks.py b/python/refcat/tasks.py
index 8b29f94..cf23a55 100644
--- a/python/refcat/tasks.py
+++ b/python/refcat/tasks.py
@@ -760,7 +760,7 @@ class UnmatchedMapped(Refcat):
     def run(self):
         output = shellout("""
                           zstdcat -T0 {input} |
-                          skate-map -m cts |
+                          skate-map -m cns |
                           LC_ALL=C sort -T {tmpdir} -S25% -k1,1 --parallel 4 |
                           zstd -T0 -c > {output}
                           """,
-- 
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