1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
|
-- written for Postgres 9.6 with OSSP extension for UUIDs
CREATE EXTENSION IF NOT EXISTS "uuid-ossp";
-- uuid_generate_v1mc: timestamp ordered, random MAC address
-- uuid_generate_v4: totally random
-- NB: could use LIKE clause, or "composite types"
CREATE TABLE editor (
id BIGSERIAL PRIMARY KEY,
username TEXT NOT NULL UNIQUE,
is_admin BOOLEAN NOT NULL DEFAULT false,
active_editgroup_id BIGINT -- REFERENCES( editgroup(id) via ALTER below
);
CREATE TABLE editgroup (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
editor_id BIGSERIAL REFERENCES editor(id) NOT NULL,
description TEXT
);
ALTER TABLE editor
ADD CONSTRAINT editor_editgroupid_fkey FOREIGN KEY (active_editgroup_id)
REFERENCES editgroup(id);
CREATE TABLE changelog (
id BIGSERIAL PRIMARY KEY,
editgroup_id BIGINT REFERENCES editgroup(id) NOT NULL,
timestamp TIMESTAMP WITHOUT TIME ZONE DEFAULT now() NOT NULL
);
-------------------- Creators -----------------------------------------------
CREATE TABLE creator_rev (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
name TEXT NOT NULL,
orcid TEXT
);
-- Could denormalize a "is_live" flag into revision tables, to make indices
-- more efficient
CREATE INDEX creator_rev_orcid_idx ON creator_rev(orcid) WHERE orcid IS NOT NULL;
CREATE TABLE creator_ident (
id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
is_live BOOL NOT NULL DEFAULT false,
rev_id BIGINT REFERENCES creator_rev(id),
redirect_id UUID REFERENCES creator_ident(id)
);
CREATE TABLE creator_edit (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
ident_id UUID REFERENCES creator_ident(id) NOT NULL,
rev_id BIGINT REFERENCES creator_rev(id),
redirect_id UUID REFERENCES creator_ident(id),
editgroup_id BIGINT REFERENCES editgroup(id) NOT NULL
);
-------------------- Containers --------------------------------------------
CREATE TABLE container_rev (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
name TEXT NOT NULL,
publisher TEXT,
issn TEXT -- TODO: varchar
);
CREATE INDEX container_rev_issn_idx ON container_rev(issn) WHERE issn IS NOT NULL;
CREATE TABLE container_ident (
id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
is_live BOOL NOT NULL DEFAULT false,
rev_id BIGINT REFERENCES container_rev(id),
redirect_id UUID REFERENCES container_ident(id)
);
CREATE TABLE container_edit (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
ident_id UUID REFERENCES container_ident(id) NOT NULL,
rev_id BIGINT REFERENCES container_rev(id),
redirect_id UUID REFERENCES container_ident(id),
editgroup_id BIGINT REFERENCES editgroup(id) NOT NULL
);
-------------------- Files -------------------------------------------------
CREATE TABLE file_rev (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
size BIGINT,
sha1 TEXT, -- TODO: varchar or bytes
url TEXT -- TODO: URL table
);
CREATE TABLE file_ident (
id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
is_live BOOL NOT NULL DEFAULT false,
rev_id BIGINT REFERENCES file_rev(id),
redirect_id UUID REFERENCES file_ident(id)
);
CREATE TABLE file_edit (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
ident_id UUID REFERENCES file_ident(id) NOT NULL,
rev_id BIGINT REFERENCES file_rev(id),
redirect_id UUID REFERENCES file_ident(id),
editgroup_id BIGINT REFERENCES editgroup(id) NOT NULL
);
-------------------- Release -----------------------------------------------
CREATE TABLE release_rev (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
work_ident_id UUID NOT NULL, -- FOREIGN KEY; see ALRTER below
container_ident_id UUID REFERENCES container_ident(id),
title TEXT NOT NULL,
release_type TEXT, -- TODO: enum
date DATE,
doi TEXT,
volume TEXT,
pages TEXT,
issue TEXT
-- TODO: identifier table?
);
CREATE INDEX release_rev_doi_idx ON release_rev(doi) WHERE doi IS NOT NULL;
CREATE TABLE release_ident (
id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
is_live BOOL NOT NULL DEFAULT false,
rev_id BIGINT REFERENCES release_rev(id),
redirect_id UUID REFERENCES release_ident(id)
);
CREATE TABLE release_edit (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
ident_id UUID REFERENCES release_ident(id) NOT NULL,
rev_id BIGINT REFERENCES release_rev(id),
redirect_id UUID REFERENCES release_ident(id),
editgroup_id BIGINT REFERENCES editgroup(id) NOT NULL
);
-------------------- Works --------------------------------------------------
CREATE TABLE work_rev (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
-- not even a work, for now
work_type TEXT, -- TODO: enum?
primary_release_id UUID REFERENCES release_ident(id)
);
CREATE TABLE work_ident (
id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
is_live BOOL NOT NULL DEFAULT false,
rev_id BIGINT REFERENCES work_rev(id),
redirect_id UUID REFERENCES work_ident(id)
);
CREATE TABLE work_edit (
id BIGSERIAL PRIMARY KEY,
extra_json JSON,
ident_id UUID REFERENCES work_ident(id) NOT NULL,
rev_id BIGINT REFERENCES work_rev(id),
redirect_id UUID REFERENCES work_ident(id),
editgroup_id BIGINT REFERENCES editgroup(id) NOT NULL
);
ALTER TABLE release_rev
ADD CONSTRAINT release_containeridentid_fkey FOREIGN KEY (work_ident_id)
REFERENCES work_ident(id);
-------------------- Inter-Entity Relations
CREATE TABLE release_contrib (
id BIGSERIAL PRIMARY KEY,
release_rev BIGSERIAL REFERENCES release_rev(id) NOT NULL,
creator_ident_id UUID REFERENCES creator_ident(id),
stub TEXT,
contrib_type TEXT
);
CREATE TABLE release_ref (
id BIGSERIAL PRIMARY KEY,
release_rev BIGSERIAL REFERENCES release_rev(id) NOT NULL,
target_release_ident_id UUID REFERENCES release_ident(id), -- or work?
index BIGINT,
stub TEXT
);
CREATE TABLE file_release (
file_rev BIGSERIAL REFERENCES file_rev(id) NOT NULL,
target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL,
PRIMARY KEY (file_rev, target_release_ident_id)
);
---------------------------------------------------------------------------
---------------------------------------------------------------------------
---------------------------------------------------------------------------
-- Fake data at the raw SQL level, for early development and testing
BEGIN;
INSERT INTO editor (username, is_admin) VALUES
('admin', true),
('claire', true),
('doug', false);
INSERT INTO editgroup (editor_id, description) VALUES
(1, 'first edit ever!'),
(1, 'another one!'),
(3, 'user edit'),
(2, 'uncommited edit'),
(1, 'journal edit'),
(1, 'another journal edit');
INSERT INTO editor (username, is_admin, active_editgroup_id) VALUES
('bnewbold', true, 4);
INSERT INTO changelog (editgroup_id) VALUES
(1),
(2),
(3),
(4),
(5);
INSERT INTO container_rev (name, issn) VALUES
('Journal of Trivial Results', '1234-5678'),
('MySpace Blog', null);
INSERT INTO container_ident (id, is_live, rev_id, redirect_id) VALUES
('f1f046a3-45c9-4b99-cccc-000000000001', true, 1, null),
('f1f046a3-45c9-4b99-cccc-000000000002', true, 2, null);
INSERT INTO container_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES
('f1f046a3-45c9-4b99-cccc-000000000001', 1, null, 4),
('f1f046a3-45c9-4b99-cccc-000000000002', 2, null, 5);
INSERT INTO creator_rev (name, orcid) VALUES
('Grace Hopper', null),
('Emily Noethe', null),
('Christine Moran', '0000-0003-2088-7465');
INSERT INTO creator_ident (id, is_live, rev_id, redirect_id) VALUES
('f1f046a3-45c9-4b99-adce-000000000001', true, 1, null),
('f1f046a3-45c9-4b99-adce-000000000002', true, 2, null),
('f1f046a3-45c9-4b99-adce-000000000003', true, 3, null),
('f1f046a3-45c9-4b99-adce-000000000004', false, 2, null);
INSERT INTO creator_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES
('f1f046a3-45c9-4b99-adce-000000000001', 1, null, 1),
('f1f046a3-45c9-4b99-adce-000000000002', 2, null, 2),
('f1f046a3-45c9-4b99-adce-000000000003', 3, null, 3),
('f1f046a3-45c9-4b99-adce-000000000004', 2, null, 4);
INSERT INTO file_rev (size, sha1, url) VALUES
(null, null, null),
(4321, '7d97e98f8af710c7e7fe703abc8f639e0ee507c4', 'http://archive.org/robots.txt');
INSERT INTO file_ident (id, is_live, rev_id, redirect_id) VALUES
('f1f046a3-45c9-4b99-ffff-000000000001', true, 1, null),
('f1f046a3-45c9-4b99-ffff-000000000002', true, 2, null);
INSERT INTO file_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES
('f1f046a3-45c9-4b99-ffff-000000000001', 1, null, 4),
('f1f046a3-45c9-4b99-ffff-000000000002', 2, null, 5);
INSERT INTO work_rev (work_type, primary_release_id) VALUES
(null, null),
('journal-article', null);
INSERT INTO work_ident (id, is_live, rev_id, redirect_id) VALUES
('f1f046a3-45c9-4b99-3333-000000000001', true, 1, null),
('f1f046a3-45c9-4b99-3333-000000000002', true, 2, null);
INSERT INTO work_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES
('f1f046a3-45c9-4b99-3333-000000000001', 1, null, 4),
('f1f046a3-45c9-4b99-3333-000000000002', 2, null, 5);
INSERT INTO release_rev (work_ident_id, container_ident_id, title, release_type, date, doi, volume, pages, issue) VALUES
('f1f046a3-45c9-4b99-3333-000000000001', null, 'example title', null, null, null, null, null, null),
('f1f046a3-45c9-4b99-3333-000000000002', 'f1f046a3-45c9-4b99-cccc-000000000001', 'bigger example', 'journal-article', '2018-01-01', '10.123/abc', '12', '5-9', 'IV');
INSERT INTO release_ident (id, is_live, rev_id, redirect_id) VALUES
('f1f046a3-45c9-4b99-4444-000000000001', true, 1, null),
('f1f046a3-45c9-4b99-4444-000000000002', true, 2, null);
INSERT INTO release_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES
('f1f046a3-45c9-4b99-4444-000000000001', 1, null, 4),
('f1f046a3-45c9-4b99-4444-000000000002', 2, null, 5);
INSERT INTO release_contrib (release_rev, creator_ident_id, stub, contrib_type) VALUES
(2, null, null, null),
(2, 'f1f046a3-45c9-4b99-adce-000000000002', 'some contrib', 'editor');
INSERT INTO release_ref (release_rev, target_release_ident_id, index, stub) VALUES
(2, null, null, null),
(2, 'f1f046a3-45c9-4b99-4444-000000000001', 4, 'citation note');
INSERT INTO file_release (file_rev, target_release_ident_id) VALUES
(2, 'f1f046a3-45c9-4b99-4444-000000000002');
COMMIT;
|