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import json, gzip
import pytest
from fatcat_tools.importers import JstorImporter, Bs4XmlFilePusher
from fixtures import api
from bs4 import BeautifulSoup
@pytest.fixture(scope="function")
def jstor_importer(api):
with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file:
yield JstorImporter(api, issn_file, extid_map_file='tests/files/example_map.sqlite3', bezerk_mode=True)
@pytest.fixture(scope="function")
def jstor_importer_existing(api):
with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file:
yield JstorImporter(api, issn_file, extid_map_file='tests/files/example_map.sqlite3', bezerk_mode=False)
def test_jstor_importer(jstor_importer):
last_index = jstor_importer.api.get_changelog(limit=1)[0].index
with open('tests/files/jstor-article-10.2307_111039.xml', 'r') as f:
jstor_importer.bezerk_mode = True
counts = Bs4XmlFilePusher(jstor_importer, f, "article").run()
assert counts['insert'] == 1
assert counts['exists'] == 0
assert counts['skip'] == 0
# fetch most recent editgroup
change = jstor_importer.api.get_changelog_entry(index=last_index+1)
eg = change.editgroup
assert eg.description
assert "jstor" in eg.description.lower()
assert eg.extra['git_rev']
assert "fatcat_tools.JstorImporter" in eg.extra['agent']
last_index = jstor_importer.api.get_changelog(limit=1)[0].index
with open('tests/files/jstor-article-10.2307_111039.xml', 'r') as f:
jstor_importer.bezerk_mode = False
jstor_importer.reset()
counts = Bs4XmlFilePusher(jstor_importer, f, "article").run()
assert counts['insert'] == 0
assert counts['exists'] == 1
assert counts['skip'] == 0
assert last_index == jstor_importer.api.get_changelog(limit=1)[0].index
def test_jstor_xml_parse(jstor_importer):
with open('tests/files/jstor-article-10.2307_111039.xml', 'r') as f:
soup = BeautifulSoup(f, "xml")
r = jstor_importer.parse_record(soup.find_all("article")[0])
print(r.extra)
assert r.title == "On the Universal Law of Attraction, Including that of Gravitation, as a Particular Case of Approximation Deducible from the Principle that Equal and Similar Particles of Matter Move Similarly, Relatively to Each other. [Abstract]"
assert r.subtitle == None
assert r.original_title == None
assert r.publisher == "The Royal Society"
assert r.release_type == "abstract"
assert r.release_stage == "published"
assert r.license_slug == None
assert r.ext_ids.doi == None
assert r.ext_ids.jstor == "111039"
assert r.language == "en"
assert r.volume == "5"
assert r.issue == None
assert r.pages == "831-832"
# None because jan 1st
assert r.release_date == None
assert r.release_year == 1843
# matched by ISSN, so shouldn't be in there?
#assert extra['container_name'] == "Abstracts of the Papers Communicated to the Royal Society of London"
assert len(r.contribs) == 1
assert r.extra['jstor']['journal_ids'] == ['abstpapecommroya', 'j100687']
assert r.contribs[0].raw_name == "John Kinnersley Smythies"
assert r.contribs[0].given_name == "John Kinnersley"
assert r.contribs[0].surname == "Smythies"
assert r.refs == None
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