1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
|
import json
import pytest
import datetime
from copy import copy
from fatcat_client import *
from fatcat_client.rest import ApiException
from fixtures import *
def test_release(api):
eg = quick_eg(api)
# all the fields!
r1 = ReleaseEntity(
title="some title",
subtitle="son of some title",
original_title="оригинальное название",
release_type="post-weblog",
release_stage="submitted",
release_date=datetime.datetime.utcnow().date(),
release_year=2015,
withdrawn_status="withdrawn",
withdrawn_year=2017,
withdrawn_date="2017-04-10",
ext_ids=ReleaseExtIds(
doi="10.5555/12345678",
pmid="12345",
pmcid="PMC4321",
wikidata_qid="Q1234",
isbn13="978-3-16-148410-0",
core="187348",
arxiv="aslkdjfh",
jstor="8328424",
mag="9439328",
ark="ark:/12025/654xz321",
),
volume="84",
number="RFC1234",
version="v4",
issue="XII",
pages="4-99",
publisher="some publisher",
language="en",
license_slug="CC-0",
contribs=[
ReleaseContrib(
given_name="Paul",
surname="Otlet"),
ReleaseContrib(
raw_name="Cindy Sherman",
given_name="Cindy",
surname="Sherman"),
ReleaseContrib(
raw_name="Andy Warhol"),
],
refs=[],
abstracts=[
ReleaseAbstract(
content="this is some abstract",
mimetype="text/plain",
lang="en"),
ReleaseAbstract(
content="this is some other abstract",
mimetype="text/plain",
lang="de"),
],
extra=dict(a=1, b=2),
edit_extra=dict(test_key="releases rule"),
)
r1.bogus = "asdf"
r1edit = api.create_release(eg.editgroup_id, r1)
assert r1edit.extra == r1.edit_extra
api.accept_editgroup(eg.editgroup_id)
r2 = api.get_release(r1edit.ident)
# get revision
r2_rev = api.get_release_revision(r1edit.revision)
assert r1edit.revision == r2_rev.revision
assert r2.revision == r2_rev.revision
assert r2.title == r2_rev.title
# check that fields match
assert r1.title == r2.title
assert r1.subtitle == r2.subtitle
assert r1.original_title == r2.original_title
assert r1.release_type == r2.release_type
assert r1.release_stage == r2.release_stage
assert r1.release_date == r2.release_date
assert r1.release_year == r2.release_year
assert r1.withdrawn_status == r2.withdrawn_status
assert str(r1.withdrawn_date) == str(r2.withdrawn_date)
assert r1.withdrawn_year == r2.withdrawn_year
assert r1.ext_ids.doi == r2.ext_ids.doi
assert r1.ext_ids.pmid == r2.ext_ids.pmid
assert r1.ext_ids.pmcid == r2.ext_ids.pmcid
assert r1.ext_ids.wikidata_qid == r2.ext_ids.wikidata_qid
assert r1.ext_ids.isbn13 == r2.ext_ids.isbn13
assert r1.ext_ids.core == r2.ext_ids.core
assert r1.ext_ids.arxiv == r2.ext_ids.arxiv
assert r1.ext_ids.jstor == r2.ext_ids.jstor
assert r1.ext_ids.ark == r2.ext_ids.ark
assert r1.ext_ids.mag == r2.ext_ids.mag
assert r1.number == r2.number
assert r1.version == r2.version
assert r1.volume == r2.volume
assert r1.issue == r2.issue
assert r1.pages == r2.pages
assert r1.publisher == r2.publisher
assert r1.language == r2.language
assert r1.license_slug == r2.license_slug
assert r1.extra == r2.extra
for i in range(len(r1.abstracts)):
r1.abstracts[i].content == r2.abstracts[i].content
r1.abstracts[i].mimetype == r2.abstracts[i].mimetype
r1.abstracts[i].lang == r2.abstracts[i].lang
for i in range(len(r1.contribs)):
r1.contribs[i] == r2.contribs[i]
for i in range(len(r1.refs)):
r1.refs[i] == r2.refs[i]
# expansion
# TODO: via work
# lookup
# TODO: via all; but need to generate random identifiers
# get redirects (none)
assert api.get_release_redirects(r2.ident) == []
# delete
eg = quick_eg(api)
api.delete_release(eg.editgroup_id, r2.ident)
api.accept_editgroup(eg.editgroup_id)
r2 = api.get_release(r2.ident)
assert r2.state == "deleted"
def test_release_examples(api):
api.lookup_release(pmid='54321')
api.lookup_release(doi='10.123/abc')
api.lookup_release(isbn13='978-3-16-148410-0')
api.lookup_release(arxiv='1905.03769v1')
api.lookup_release(jstor='1819117828')
api.lookup_release(ark='ark:/13030/m53r5pzm')
api.lookup_release(mag='992489213')
# failed lookup exception type
try:
api.lookup_release(pmid='5432100')
except fatcat_client.rest.ApiException as ae:
assert ae.status == 404
assert "DatabaseRowNotFound" in ae.body
# failed lookup formatting
try:
api.lookup_release(doi='blah')
except fatcat_client.rest.ApiException as ae:
assert ae.status == 400
assert "MalformedExternalId" in ae.body
r1 = api.get_release('aaaaaaaaaaaaarceaaaaaaaaai')
assert r1.title.startswith("A bigger example")
assert len(r1.refs) == 5
assert r1.contribs[14].role == "editor"
assert r1.abstracts[0].mimetype == "application/xml+jats"
api.get_release_files(r1.ident)
api.get_release_filesets(r1.ident)
api.get_release_webcaptures(r1.ident)
def test_empty_fields(api):
eg = quick_eg(api)
r1 = ReleaseEntity(
title="something",
contribs=[ReleaseContrib(raw_name="somebody")],
ext_ids=ReleaseExtIds())
r1edit = api.create_release(eg.editgroup_id, r1)
with pytest.raises(fatcat_client.rest.ApiException):
r2 = ReleaseEntity(title="", ext_ids=ReleaseExtIds())
api.create_release(eg.editgroup_id, r2)
with pytest.raises(fatcat_client.rest.ApiException):
r2 = ReleaseEntity(title="something", contribs=[ReleaseContrib(raw_name="")], ext_ids=ReleaseExtIds())
api.create_release(eg.editgroup_id, r2)
def test_controlled_vocab(api):
eg = quick_eg(api)
r1 = ReleaseEntity(title="something", release_type="journal-thingie", ext_ids=ReleaseExtIds())
with pytest.raises(fatcat_client.rest.ApiException):
api.create_release(eg.editgroup_id, r1)
r1.release_type = "article"
api.create_release(eg.editgroup_id, r1)
r2 = ReleaseEntity(title="something elase", release_stage="pre-print", ext_ids=ReleaseExtIds())
with pytest.raises(fatcat_client.rest.ApiException):
api.create_release(eg.editgroup_id, r2)
r2.release_stage = "published"
api.create_release(eg.editgroup_id, r2)
|
