-- written for Postgres 9.6 with OSSP extension for UUIDs -- ... but actually runs on Postgres 11 in qa/production/tests -- Previously VARCHAR and fixed-size CHAR was used in this schema for specific -- columns (especially fixed-size external identifiers, and hashes). This was -- found to cause lookup problems, so switched to TEXT with CHECK constraints. -- Default timezone (of clients) is expected to be UTC. CREATE EXTENSION IF NOT EXISTS "uuid-ossp"; -- uuid_generate_v1mc: timestamp ordered, random MAC address -- uuid_generate_v4: totally random -- NB: could use LIKE clause, or "composite types" CREATE TABLE editor ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), username TEXT NOT NULL CHECK (username ~* '^[A-Za-z][A-Za-z0-9._-]{2,24}$'), -- UNIQ below is_superuser BOOLEAN NOT NULL DEFAULT false, is_admin BOOLEAN NOT NULL DEFAULT false, is_bot BOOLEAN NOT NULL DEFAULT false, is_active BOOLEAN NOT NULL DEFAULT true, registered TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, auth_epoch TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, wrangler_id UUID REFERENCES editor(id) ); -- case-insensitive UNIQ index on username CREATE UNIQUE INDEX editor_username_uniq_idx on editor(lower(username)); CREATE INDEX editor_username_idx ON editor(username); CREATE TABLE auth_oidc ( id BIGSERIAL PRIMARY KEY, created TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, editor_id UUID REFERENCES editor(id) NOT NULL, provider TEXT NOT NULL, oidc_iss TEXT NOT NULL, oidc_sub TEXT NOT NULL, UNIQUE (editor_id, provider), UNIQUE (oidc_iss, oidc_sub) ); CREATE TABLE editgroup ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editor_id UUID REFERENCES editor(id) NOT NULL, created TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, submitted TIMESTAMP WITH TIME ZONE, is_accepted BOOLEAN DEFAULT false NOT NULL, description TEXT CHECK (octet_length(description) >= 1), extra_json JSONB ); -- for fast "recent, reviewable" and "work in progress" queries CREATE INDEX editgroup_submitted_idx ON editgroup(is_accepted, submitted); CREATE INDEX editgroup_editor_idx ON editgroup(is_accepted, editor_id); CREATE TABLE editgroup_annotation ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, editor_id UUID REFERENCES editor(id) NOT NULL, created TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, comment_markdown TEXT CHECK (octet_length(comment_markdown) >= 1), extra_json JSONB ); CREATE INDEX editgroup_annotation_editgroup_created_idx ON editgroup_annotation(editgroup_id, created); CREATE INDEX editgroup_annotation_editor_created_idx ON editgroup_annotation(editor_id, created); CREATE TABLE changelog ( id BIGSERIAL PRIMARY KEY, editgroup_id UUID REFERENCES editgroup(id) NOT NULL, timestamp TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL ); -- for "is this editgroup merged" queries CREATE INDEX changelog_editgroup_idx ON changelog(editgroup_id); CREATE TABLE abstracts ( -- fixed size hash (in hex). TODO: switch to bytes sha1 TEXT PRIMARY KEY CHECK (octet_length(sha1) = 40), content TEXT NOT NULL CHECK (octet_length(content) >= 1) ); CREATE TABLE refs_blob ( -- fixed size hash (in hex). TODO: switch to bytes sha1 TEXT PRIMARY KEY CHECK (octet_length(sha1) = 40), refs_json JSONB NOT NULL ); -------------------- Creators ----------------------------------------------- CREATE TABLE creator_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB, display_name TEXT NOT NULL CHECK (octet_length(display_name) >= 1), given_name TEXT CHECK (octet_length(given_name) >= 1), surname TEXT CHECK (octet_length(surname) >= 1), -- fixed size identifier orcid TEXT CHECK(octet_length(orcid) = 19), -- limited size for data quality wikidata_qid TEXT CHECK(octet_length(wikidata_qid) <= 12) -- TODO: viaf TEXT, -- TODO: aliases/alternatives -- TODO: sortable name? ); -- Could denormalize a "is_live" flag into revision tables, to make indices -- more efficient CREATE INDEX creator_rev_orcid_idx ON creator_rev(orcid); CREATE INDEX creator_rev_wikidata_idx ON creator_rev(wikidata_qid); CREATE TABLE creator_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES creator_rev(id), redirect_id UUID REFERENCES creator_ident(id) ); CREATE INDEX creator_ident_rev_idx ON creator_ident(rev_id); CREATE INDEX creator_ident_redirect_idx ON creator_ident(redirect_id); CREATE TABLE creator_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES creator_ident(id) NOT NULL, rev_id UUID REFERENCES creator_rev(id), redirect_id UUID REFERENCES creator_ident(id), prev_rev UUID REFERENCES creator_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); -------------------- Containers -------------------------------------------- CREATE TABLE container_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB, name TEXT NOT NULL CHECK (octet_length(name) >= 1), container_type TEXT, publisher TEXT CHECK (octet_length(publisher) >= 1), -- fixed size identifier issnl TEXT CHECK(octet_length(issnl) = 9), -- limited size for data quality wikidata_qid TEXT CHECK(octet_length(wikidata_qid) <= 12) ); CREATE INDEX container_rev_issnl_idx ON container_rev(issnl); CREATE INDEX container_rev_wikidata_idx ON container_rev(wikidata_qid); CREATE TABLE container_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES container_rev(id), redirect_id UUID REFERENCES container_ident(id) ); CREATE INDEX container_ident_rev_idx ON container_ident(rev_id); CREATE INDEX container_ident_redirect_idx ON container_ident(redirect_id); CREATE TABLE container_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES container_ident(id) NOT NULL, rev_id UUID REFERENCES container_rev(id), redirect_id UUID REFERENCES container_ident(id), prev_rev UUID REFERENCES container_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); -------------------- Files ------------------------------------------------- CREATE TABLE file_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB, size_bytes BIGINT, -- fixed size hashes (in hex). TODO: switch to binary type type sha1 TEXT CHECK (octet_length(sha1) = 40), sha256 TEXT CHECK (octet_length(sha256) = 64), md5 TEXT CHECK (octet_length(md5) = 32), mimetype TEXT CHECK (octet_length(mimetype) >= 1) ); CREATE INDEX file_rev_sha1_idx ON file_rev(sha1); CREATE INDEX file_rev_md5_idx ON file_rev(md5); CREATE INDEX file_rev_sha256_idx ON file_rev(sha256); CREATE TABLE file_rev_url ( id BIGSERIAL PRIMARY KEY, file_rev UUID REFERENCES file_rev(id) NOT NULL, rel TEXT NOT NULL CHECK (octet_length(rel) >= 1), -- TODO: enum? web, webarchive, repo, etc url TEXT NOT NULL CHECK (octet_length(url) >= 1) ); CREATE INDEX file_rev_url_rev_idx ON file_rev_url(file_rev); CREATE TABLE file_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES file_rev(id), redirect_id UUID REFERENCES file_ident(id) ); CREATE INDEX file_ident_rev_idx ON file_ident(rev_id); CREATE INDEX file_ident_redirect_idx ON file_ident(redirect_id); CREATE TABLE file_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES file_ident(id) NOT NULL, rev_id UUID REFERENCES file_rev(id), redirect_id UUID REFERENCES file_ident(id), prev_rev UUID REFERENCES file_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); -------------------- Fileset ----------------------------------------------- CREATE TABLE fileset_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB ); CREATE TABLE fileset_rev_url ( id BIGSERIAL PRIMARY KEY, fileset_rev UUID REFERENCES fileset_rev(id) NOT NULL, rel TEXT NOT NULL CHECK (octet_length(rel) >= 1), -- TODO: enum? web, webarchive, repo, etc url TEXT NOT NULL CHECK (octet_length(url) >= 1) ); CREATE INDEX fileset_rev_url_rev_idx ON fileset_rev_url(fileset_rev); CREATE TABLE fileset_rev_file ( id BIGSERIAL PRIMARY KEY, fileset_rev UUID REFERENCES fileset_rev(id) NOT NULL, path_name TEXT NOT NULL CHECK (octet_length(path_name) >= 1), size_bytes BIGINT NOT NULL, md5 TEXT CHECK(octet_length(md5) = 32), sha1 TEXT CHECK(octet_length(sha1) = 40), sha256 TEXT CHECK(octet_length(sha256) = 64), extra_json JSONB ); CREATE INDEX fileset_rev_file_rev_idx ON fileset_rev_file(fileset_rev); CREATE TABLE fileset_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES fileset_rev(id), redirect_id UUID REFERENCES fileset_ident(id) ); CREATE INDEX fileset_ident_rev_idx ON fileset_ident(rev_id); CREATE TABLE fileset_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES fileset_ident(id) NOT NULL, rev_id UUID REFERENCES fileset_rev(id), redirect_id UUID REFERENCES fileset_ident(id), prev_rev UUID REFERENCES fileset_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); -------------------- Webcapture ----------------------------------------------- CREATE TABLE webcapture_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB, original_url TEXT NOT NULL CHECK (octet_length(original_url) >= 1), timestamp TIMESTAMP WITH TIME ZONE NOT NULL ); CREATE TABLE webcapture_rev_url ( id BIGSERIAL PRIMARY KEY, webcapture_rev UUID REFERENCES webcapture_rev(id) NOT NULL, rel TEXT NOT NULL CHECK (octet_length(rel) >= 1), -- TODO: enum? web, webarchive, repo, etc url TEXT NOT NULL CHECK (octet_length(url) >= 1) ); CREATE INDEX webcapture_rev_url_rev_idx ON webcapture_rev_url(webcapture_rev); CREATE TABLE webcapture_rev_cdx ( id BIGSERIAL PRIMARY KEY, webcapture_rev UUID REFERENCES webcapture_rev(id) NOT NULL, surt TEXT NOT NULL CHECK (octet_length(surt) >= 1), timestamp TIMESTAMP WITH TIME ZONE NOT NULL, url TEXT NOT NULL CHECK (octet_length(url) >= 1), mimetype TEXT CHECK (octet_length(mimetype) >= 1), status_code BIGINT, sha1 TEXT CHECK(octet_length(sha1) = 40) NOT NULL, sha256 TEXT CHECK(octet_length(sha256) = 64) -- could extend with: language (detection), simhash, redirect ); CREATE INDEX webcapture_rev_cdx_rev_idx ON webcapture_rev_cdx(webcapture_rev); CREATE TABLE webcapture_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES webcapture_rev(id), redirect_id UUID REFERENCES webcapture_ident(id) ); CREATE INDEX webcapture_ident_rev_idx ON webcapture_ident(rev_id); CREATE TABLE webcapture_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES webcapture_ident(id) NOT NULL, rev_id UUID REFERENCES webcapture_rev(id), redirect_id UUID REFERENCES webcapture_ident(id), prev_rev UUID REFERENCES webcapture_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); -------------------- Release ----------------------------------------------- CREATE TABLE release_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB, work_ident_id UUID NOT NULL, -- FOREIGN KEY; see ALRTER below container_ident_id UUID REFERENCES container_ident(id), refs_blob_sha1 TEXT REFERENCES refs_blob(sha1), title TEXT NOT NULL CHECK (octet_length(title) >= 1), original_title TEXT CHECK (octet_length(original_title) >= 1), release_type TEXT, -- TODO: enum release_status TEXT, -- TODO: enum release_date DATE, release_year BIGINT, doi TEXT CHECK (octet_length(doi) >= 7), -- CHECK for length limit for data quality pmid TEXT CHECK (octet_length(pmid) <= 12), pmcid TEXT CHECK (octet_length(pmcid) <= 12), wikidata_qid TEXT CHECK (octet_length(wikidata_qid) <= 12), isbn13 TEXT CHECK (octet_length(isbn13) = 17), core_id TEXT CHECK (octet_length(core_id) <= 12), arxiv_id TEXT CHECK (octet_length(arxiv_id) <= 12), jstor_id TEXT CHECK (octet_length(jstor_id) <= 12), volume TEXT CHECK (octet_length(volume) >= 1), issue TEXT CHECK (octet_length(issue) >= 1), pages TEXT CHECK (octet_length(pages) >= 1), publisher TEXT CHECK (octet_length(publisher) >= 1), -- for books, NOT if container exists language TEXT CHECK (octet_length(language) >= 1), -- primary language of the work's fulltext; RFC1766/ISO639-1 license_slug TEXT CHECK (octet_length(license_slug) >= 1) -- TODO: oclc_ocn (TEXT or BIGINT) -- TODO: identifier table? ); CREATE INDEX release_rev_doi_idx ON release_rev(doi); CREATE INDEX release_rev_pmid_idx ON release_rev(pmid); CREATE INDEX release_rev_pmcid_idx ON release_rev(pmcid); CREATE INDEX release_rev_wikidata_idx ON release_rev(wikidata_qid); CREATE INDEX release_rev_isbn13_idx ON release_rev(isbn13); CREATE INDEX release_rev_core_idx ON release_rev(core_id); CREATE INDEX release_rev_arxiv_idx ON release_rev(arxiv_id); CREATE INDEX release_rev_jstor_idx ON release_rev(jstor_id); CREATE INDEX release_rev_work_idx ON release_rev(work_ident_id); CREATE TABLE release_rev_abstract ( id BIGSERIAL PRIMARY KEY, release_rev UUID REFERENCES release_rev(id) NOT NULL, abstract_sha1 TEXT REFERENCES abstracts(sha1) NOT NULL, mimetype TEXT CHECK (octet_length(mimetype) >= 1), lang TEXT CHECK (octet_length(lang) >= 1) ); CREATE INDEX release_rev_abstract_rev_idx ON release_rev_abstract(release_rev); CREATE INDEX release_rev_abstract_sha1_idx ON release_rev_abstract(abstract_sha1); CREATE TABLE release_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES release_rev(id), redirect_id UUID REFERENCES release_ident(id) ); CREATE INDEX release_ident_rev_idx ON release_ident(rev_id); CREATE INDEX release_ident_redirect_idx ON release_ident(redirect_id); CREATE TABLE release_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES release_ident(id) NOT NULL, rev_id UUID REFERENCES release_rev(id), redirect_id UUID REFERENCES release_ident(id), prev_rev UUID REFERENCES release_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); -------------------- Works -------------------------------------------------- CREATE TABLE work_rev ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), extra_json JSONB ); CREATE TABLE work_ident ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), is_live BOOL NOT NULL DEFAULT false, rev_id UUID REFERENCES work_rev(id), redirect_id UUID REFERENCES work_ident(id) ); CREATE INDEX work_ident_rev_idx ON work_ident(rev_id); CREATE INDEX work_ident_redirect_idx ON work_ident(redirect_id); CREATE TABLE work_edit ( id UUID PRIMARY KEY DEFAULT uuid_generate_v4(), editgroup_id UUID REFERENCES editgroup(id) NOT NULL, updated TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, ident_id UUID REFERENCES work_ident(id) NOT NULL, rev_id UUID REFERENCES work_rev(id), redirect_id UUID REFERENCES work_ident(id), prev_rev UUID REFERENCES work_rev(id), extra_json JSONB, UNIQUE (editgroup_id, ident_id) ); ALTER TABLE release_rev ADD CONSTRAINT release_containeridentid_fkey FOREIGN KEY (work_ident_id) REFERENCES work_ident(id); -------------------- Inter-Entity Relations CREATE TABLE release_contrib ( id BIGSERIAL PRIMARY KEY, release_rev UUID REFERENCES release_rev(id) NOT NULL, creator_ident_id UUID REFERENCES creator_ident(id), raw_name TEXT CHECK (octet_length(raw_name) >= 1), role TEXT, -- TODO: enum? raw_affiliation TEXT CHECK (octet_length(raw_affiliation) >= 1), index_val INTEGER, extra_json JSONB ); CREATE INDEX release_contrib_rev_idx ON release_contrib(release_rev); CREATE INDEX release_contrib_creator_idx ON release_contrib(creator_ident_id); CREATE TABLE release_ref ( release_rev UUID REFERENCES release_rev(id) NOT NULL, index_val INTEGER NOT NULL, target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, -- all other fields are interned in refs_blob as JSONB -- key TEXT, -- extra_json JSONB, -- title, year, container_title, locator (aka, page), oci_id -- container_name TEXT, -- year INTEGER, -- title TEXT, -- locator TEXT PRIMARY KEY(release_rev, index_val) ); CREATE INDEX release_ref_target_release_idx ON release_ref(target_release_ident_id); CREATE TABLE file_rev_release ( file_rev UUID REFERENCES file_rev(id) NOT NULL, target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, PRIMARY KEY (file_rev, target_release_ident_id) ); CREATE INDEX file_rev_release_target_release_idx ON file_rev_release(target_release_ident_id); CREATE TABLE fileset_rev_release ( fileset_rev UUID REFERENCES fileset_rev(id) NOT NULL, target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, PRIMARY KEY (fileset_rev, target_release_ident_id) ); CREATE INDEX fileset_rev_release_target_release_idx ON fileset_rev_release(target_release_ident_id); CREATE TABLE webcapture_rev_release ( webcapture_rev UUID REFERENCES webcapture_rev(id) NOT NULL, target_release_ident_id UUID REFERENCES release_ident(id) NOT NULL, PRIMARY KEY (webcapture_rev, target_release_ident_id) ); CREATE INDEX webcapture_rev_release_target_release_idx ON webcapture_rev_release(target_release_ident_id); --------------------------------------------------------------------------- --------------------------------------------------------------------------- --------------------------------------------------------------------------- -- Fake data at the raw SQL level, for early development and testing -- Convention: -- * first entity is smallest possible (mostly null) -- * second entity is rich (all fields/relations designed) but artificial -- * third entity (and above) are realistic (real DOI, etc) -- -- With the exception of editor IDs/usernames, these should *not* be considered -- part of a stable external interface, and edits might be made here instead of -- in a migration. BEGIN; INSERT INTO editor (id, username, is_superuser, is_admin, is_bot, auth_epoch) VALUES ('00000000-0000-0000-AAAA-000000000001', 'root', true, true, false, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaae ('00000000-0000-0000-AAAA-000000000002', 'admin', true, true, false, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaai ('00000000-0000-0000-AAAA-000000000003', 'demo-user', false, true, false, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaam ('00000000-0000-0000-AAAA-000000000004', 'claire', false, false, false, default), -- aaaaaaaaaaaabkvkaaaaaaaaaq ('00000000-0000-0000-AAAA-000000000005', 'webface-bot', true, true, true, '1970-01-01T01:01:01Z'), -- aaaaaaaaaaaabkvkaaaaaaaaau ('00000000-0000-0000-AAAA-000000000006', 'bnewbold', false, true, false, '1970-01-01T01:01:01Z'); -- aaaaaaaaaaaabkvkaaaaaaaaay INSERT INTO editgroup (id, is_accepted, editor_id, description, submitted) VALUES ('00000000-0000-0000-BBBB-000000000001', true, '00000000-0000-0000-AAAA-000000000001', 'first edit ever!', NULL), -- aaaaaaaaaaaabo53aaaaaaaaae ('00000000-0000-0000-BBBB-000000000002', true, '00000000-0000-0000-AAAA-000000000001', 'another one!', NULL), -- aaaaaaaaaaaabo53aaaaaaaaai ('00000000-0000-0000-BBBB-000000000003', true, '00000000-0000-0000-AAAA-000000000003', 'user edit', NULL), -- aaaaaaaaaaaabo53aaaaaaaaam ('00000000-0000-0000-BBBB-000000000004', true, '00000000-0000-0000-AAAA-000000000002', 'uncommited edit', NULL), -- aaaaaaaaaaaabo53aaaaaaaaaq ('00000000-0000-0000-BBBB-000000000005', true, '00000000-0000-0000-AAAA-000000000001', 'journal edit', NULL), -- aaaaaaaaaaaabo53aaaaaaaaau ('00000000-0000-0000-BBBB-000000000006', false, '00000000-0000-0000-AAAA-000000000004', 'another journal edit', NULL), -- aaaaaaaaaaaabo53aaaaaaaaay ('00000000-0000-0000-BBBB-000000000007', false, '00000000-0000-0000-AAAA-000000000003', 'edit for submission', now()); -- aaaaaaaaaaaabo53aaaaaaaaa4 INSERT INTO editgroup_annotation (editgroup_id, editor_id, comment_markdown) VALUES ('00000000-0000-0000-BBBB-000000000007', '00000000-0000-0000-AAAA-000000000003', 'I love this edit!'), ('00000000-0000-0000-BBBB-000000000007', '00000000-0000-0000-AAAA-000000000004', 'I have concerns about this edit...'), ('00000000-0000-0000-BBBB-000000000007', '00000000-0000-0000-AAAA-000000000003', 'updated with changes, please re-review.'); INSERT INTO changelog (editgroup_id) VALUES ('00000000-0000-0000-BBBB-000000000001'), ('00000000-0000-0000-BBBB-000000000002'), ('00000000-0000-0000-BBBB-000000000003'), ('00000000-0000-0000-BBBB-000000000004'), ('00000000-0000-0000-BBBB-000000000005'); INSERT INTO abstracts (sha1, content) VALUES ('1ba86bf8c2979a62d29b18b537e50b2b093be27e', 'some long abstract in plain text'), ('0da908ab584b5e445a06beb172e3fab8cb5169e3', '<jats>A longer, more correct abstract should in theory go here</jats>'); INSERT INTO container_rev (id, name, publisher, issnl, wikidata_qid, extra_json) VALUES ('00000000-0000-0000-1111-FFF000000001', 'MySpace Blog', null, null, null, null), ('00000000-0000-0000-1111-FFF000000002', 'Journal of Trivial Results', 'bogus publishing group', '1234-5678', 'Q1234', '{"country": "nz", "languages": ["en", "es"], "original_name": "Journal of Significant Results", "doaj": {"as_of": "2019-01-01", "works": false}, "road": {"as_of": "2019-01-01"}, "first_year": 1990, "urls": ["http://www.ajnonline.com/pt/re/ajn/home.htm;jsessionid=D8IrvYWQbd7q4A7Au1Lu3cFSJuXcVZqm2YnPJ5hBG52cgZw2htKx!958525354!-949856144!9001!-1"]}'), ('00000000-0000-0000-1111-FFF000000003', 'PLOS Medicine', 'Public Library of Science', '1549-1277', 'Q1686921', '{"doaj": {"as_of": "2019-01-30"}, "sherpa_romeo": {"color": "green"}}'); INSERT INTO container_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-1111-000000000001', true, '00000000-0000-0000-1111-FFF000000001', null), -- aaaaaaaaaaaaaeiraaaaaaaaae ('00000000-0000-0000-1111-000000000002', true, '00000000-0000-0000-1111-FFF000000002', null), -- aaaaaaaaaaaaaeiraaaaaaaaai ('00000000-0000-0000-1111-000000000003', true, '00000000-0000-0000-1111-FFF000000003', null); -- aaaaaaaaaaaaaeiraaaaaaaaam INSERT INTO container_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES ('00000000-0000-0000-1111-000000000001', '00000000-0000-0000-1111-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), ('00000000-0000-0000-1111-000000000002', '00000000-0000-0000-1111-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), ('00000000-0000-0000-1111-000000000003', '00000000-0000-0000-1111-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-1111-FFF000000002'); INSERT INTO creator_rev (id, display_name, given_name, surname, orcid, wikidata_qid) VALUES ('00000000-0000-0000-2222-FFF000000001', 'Grace Hopper', null, null, null, null), ('00000000-0000-0000-2222-FFF000000002', 'Christine Moran', 'Christine', 'Moran', '0000-0003-2088-7465', 'Q1234'), ('00000000-0000-0000-2222-FFF000000003', 'John P. A. Ioannidis', 'John', 'Ioannidis', '0000-0003-3118-6859', 'Q5678'); INSERT INTO creator_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-2222-000000000001', true, '00000000-0000-0000-2222-FFF000000001', null), -- aaaaaaaaaaaaaircaaaaaaaaae ('00000000-0000-0000-2222-000000000002', true, '00000000-0000-0000-2222-FFF000000002', null), -- aaaaaaaaaaaaaircaaaaaaaaai ('00000000-0000-0000-2222-000000000003', true, '00000000-0000-0000-2222-FFF000000003', null), -- aaaaaaaaaaaaaircaaaaaaaaam ('00000000-0000-0000-2222-000000000004', false, '00000000-0000-0000-2222-FFF000000002', null); -- aaaaaaaaaaaaaircaaaaaaaaaq INSERT INTO creator_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES ('00000000-0000-0000-2222-000000000001', '00000000-0000-0000-2222-FFF000000001', null, '00000000-0000-0000-BBBB-000000000001', null), ('00000000-0000-0000-2222-000000000002', '00000000-0000-0000-2222-FFF000000002', null, '00000000-0000-0000-BBBB-000000000002', null), ('00000000-0000-0000-2222-000000000003', '00000000-0000-0000-2222-FFF000000003', null, '00000000-0000-0000-BBBB-000000000003', null), ('00000000-0000-0000-2222-000000000004', '00000000-0000-0000-2222-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', '00000000-0000-0000-2222-FFF000000003'); INSERT INTO file_rev (id, size_bytes, sha1, sha256, md5, mimetype) VALUES ('00000000-0000-0000-3333-FFF000000001', null, null, null, null, null), ('00000000-0000-0000-3333-FFF000000002', 4321, '7d97e98f8af710c7e7fe703abc8f639e0ee507c4', null, null, 'text/plain'), ('00000000-0000-0000-3333-FFF000000003', 255629, '3f242a192acc258bdfdb151943419437f440c313', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362', 'f4de91152c7ab9fdc2a128f962faebff', 'application/pdf'); INSERT INTO file_rev_url (file_rev, rel, url) VALUES ('00000000-0000-0000-3333-FFF000000002', 'web', 'http://archive.org/robots.txt'), ('00000000-0000-0000-3333-FFF000000003', 'publisher', 'http://journals.plos.org/plosmedicine/article/file?id=10.1371/journal.pmed.0020124&type=printable'); INSERT INTO file_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-3333-000000000001', true, '00000000-0000-0000-3333-FFF000000001', null), -- aaaaaaaaaaaaamztaaaaaaaaae ('00000000-0000-0000-3333-000000000002', true, '00000000-0000-0000-3333-FFF000000002', null), -- aaaaaaaaaaaaamztaaaaaaaaai ('00000000-0000-0000-3333-000000000003', true, '00000000-0000-0000-3333-FFF000000003', null); 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INSERT INTO fileset_rev_url (fileset_rev, rel, url) VALUES ('00000000-0000-0000-6666-FFF000000002', 'web', 'http://personal-blog.name/dataset/'), ('00000000-0000-0000-6666-FFF000000003', 'web', 'http://other-personal-blog.name/dataset/'), ('00000000-0000-0000-6666-FFF000000003', 'archive', 'https://archive.org/download/random-dataset/'); INSERT INTO fileset_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-6666-000000000001', true, '00000000-0000-0000-6666-FFF000000001', null), -- aaaaaaaaaaaaaztgaaaaaaaaam ('00000000-0000-0000-6666-000000000002', true, '00000000-0000-0000-6666-FFF000000002', null), -- aaaaaaaaaaaaaztgaaaaaaaaai ('00000000-0000-0000-6666-000000000003', true, '00000000-0000-0000-6666-FFF000000003', null); -- aaaaaaaaaaaaaztgaaaaaaaaam INSERT INTO fileset_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES ('00000000-0000-0000-6666-000000000001', '00000000-0000-0000-6666-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), ('00000000-0000-0000-6666-000000000002', '00000000-0000-0000-6666-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), ('00000000-0000-0000-6666-000000000003', '00000000-0000-0000-6666-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-6666-FFF000000002'); INSERT INTO webcapture_rev (id, original_url, timestamp) VALUES ('00000000-0000-0000-7777-FFF000000001', 'http://example.org', '1996-01-02T12:34:56Z'), ('00000000-0000-0000-7777-FFF000000002', 'http://example.org', '1996-01-02T12:34:56Z'), ('00000000-0000-0000-7777-FFF000000003', 'https://asheesh.org', '2003-02-17T04:47:21Z'); INSERT INTO webcapture_rev_cdx (webcapture_rev, surt, timestamp, url, mimetype, status_code, sha1, sha256) VALUES ('00000000-0000-0000-7777-FFF000000002', 'org,example)/', '1996-01-02T12:34:56Z', 'http://example.org', null, 200, '5886903ba5aeaf7446fe9f77bd03adfc029cedf0', null), ('00000000-0000-0000-7777-FFF000000003', 'org,asheesh)/', '2003-02-17T04:47:21Z', 'http://asheesh.org:80/', 'text/html', 200, '5886903ba5aeaf7446fe9f77bd03adfc029cedf0', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362'), ('00000000-0000-0000-7777-FFF000000003', 'org,asheesh)/robots.txt', '2003-02-17T04:47:19Z', 'http://asheesh.org:80/robots.txt', 'text/html', 404, 'a637f1d27d9bcb237310ed29f19c07e1c8cf0aa5', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362'); INSERT INTO webcapture_rev_url (webcapture_rev, rel, url) VALUES ('00000000-0000-0000-7777-FFF000000002', 'wayback', 'http://web.archive.org/web/'), ('00000000-0000-0000-7777-FFF000000003', 'wayback', 'http://web.archive.org/web/'), ('00000000-0000-0000-7777-FFF000000003', 'warc', 'https://example.org/something.warc.gz'); INSERT INTO webcapture_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-7777-000000000001', true, '00000000-0000-0000-7777-FFF000000001', null), -- aaaaaaaaaaaaa53xaaaaaaaaae ('00000000-0000-0000-7777-000000000002', true, '00000000-0000-0000-7777-FFF000000002', null), -- aaaaaaaaaaaaa53xaaaaaaaaai ('00000000-0000-0000-7777-000000000003', true, '00000000-0000-0000-7777-FFF000000003', null); -- aaaaaaaaaaaaa53xaaaaaaaaam INSERT INTO webcapture_edit (ident_id, rev_id, redirect_id, editgroup_id, prev_rev) VALUES ('00000000-0000-0000-7777-000000000001', '00000000-0000-0000-7777-FFF000000001', null, '00000000-0000-0000-BBBB-000000000003', null), ('00000000-0000-0000-7777-000000000002', '00000000-0000-0000-7777-FFF000000002', null, '00000000-0000-0000-BBBB-000000000004', null), ('00000000-0000-0000-7777-000000000003', '00000000-0000-0000-7777-FFF000000003', null, '00000000-0000-0000-BBBB-000000000005', '00000000-0000-0000-7777-FFF000000002'); 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Any casualties in the clash of randomised and observational evidence? BMJ. 2001;322:879–880"}}, {"extra": {"unstructured":"Lawlor DA, Davey Smith G, Kundu D, Bruckdorfer KR, Ebrahim S. Those confounded vitamins: What can we learn from the differences between observational versus randomised trial evidence? Lancet. 2004;363:1724–1727."}}, {"extra": {"unstructured":"Vandenbroucke JP. When are observational studies as credible as randomised trials? Lancet. 2004;363:1728–1731."}}, {"extra": {"unstructured":"Michiels S, Koscielny S, Hill C. Prediction of cancer outcome with microarrays: A multiple random validation strategy. Lancet. 2005;365:488–492."}}, {"extra": {"unstructured":"Ioannidis JPA, Ntzani EE, Trikalinos TA, Contopoulos-Ioannidis DG. Replication validity of genetic association studies. Nat Genet. 2001;29:306–309."}}, {"extra": {"unstructured":"Colhoun HM, McKeigue PM, Davey Smith G. Problems of reporting genetic associations with complex outcomes. 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