import datetime import json from fatcat_openapi_client import ( ChangelogEntry, ContainerEntity, FileEntity, FileUrl, ReleaseEntity, ReleaseExtIds, ReleaseRef, ) from fixtures import api from import_crossref import crossref_importer from import_journal_metadata import journal_metadata_importer from fatcat_tools.transforms import ( changelog_to_elasticsearch, container_to_elasticsearch, entity_from_json, file_to_elasticsearch, release_to_elasticsearch, ) def test_basic_elasticsearch_convert(crossref_importer): with open('tests/files/crossref-works.single.json', 'r') as f: # not a single line raw = json.loads(f.read()) r = crossref_importer.parse_record(raw) r.state = 'active' release_to_elasticsearch(r) def test_rich_elasticsearch_convert(): r = ReleaseEntity( title="something", release_year=1234, license_slug="CC-BY-NC", ext_ids=ReleaseExtIds(), refs=[ ReleaseRef(), ReleaseRef(target_release_id="iznnn644szdwva7khyxqzc73bi"), ], ) r.state = 'active' r.container = ContainerEntity( name="dummy journal", extra={ "ia": { "sim": { "year_spans": [[1000, 1100]], }, }, "kbart": { "lockss": { "year_spans": [[1200, 1300]], }, "jstor": { "year_spans": [[1000, 1300], [1950, 1960], [1980, 2005]], }, }, "sherpa_romeo": {"color": "blue"}, "doaj": {"as_of": "2010-02-03"}, }, ) r.files = [FileEntity( mimetype="application/pdf", urls=[ FileUrl(rel="dweb", url="dat://a954329dlk/thingie"), FileUrl(rel="webarchive", url="https://web.archive.org/web/20001122030405/http://example.com"), FileUrl(rel="web", url="https://archive.org/details/blah/file.pdf"), ], extra={ "shadows": {}, }, )] es = release_to_elasticsearch(r) assert es['release_year'] == r.release_year assert es['file_count'] == 1 assert es['fileset_count'] == 0 assert es['webcapture_count'] == 0 assert es['ref_count'] == 2 assert es['ref_linked_count'] == 1 assert es['preservation'] == "bright" assert es['is_oa'] is True assert es['is_longtail_oa'] is False assert es['is_preserved'] is True assert es['in_web'] is True assert es['in_dweb'] is True assert es['in_ia'] is True assert es['in_ia_sim'] is False assert es['in_kbart'] is True assert es['in_jstor'] is True def test_elasticsearch_release_from_json(): r = entity_from_json(open('./tests/files/release_etodop5banbndg3faecnfm6ozi.json', 'r').read(), ReleaseEntity) es = release_to_elasticsearch(r) assert es['subtitle'] == "Correpondence" assert es['ident'] == "etodop5banbndg3faecnfm6ozi" assert es['container_name'] == "BJOG: an International Journal of Obstetrics and Gynaecology" assert es['first_page'] == "1404" assert es['issue'] == "11" assert es['volume'] == "118" assert es['number'] is None assert es['preservation'] == "dark" assert es['is_oa'] is False assert es['is_longtail_oa'] is False assert es['is_preserved'] is True assert es['in_web'] is False assert es['in_dweb'] is False assert es['in_ia'] is False assert es['in_ia_sim'] is True assert es['in_kbart'] is True assert es['in_jstor'] is False # this release has a fileset, and no file r = entity_from_json(open('./tests/files/release_3mssw2qnlnblbk7oqyv2dafgey.json', 'r').read(), ReleaseEntity) es = release_to_elasticsearch(r) assert es['title'] == "Jakobshavn Glacier Bed Elevation" assert es['ident'] == "3mssw2qnlnblbk7oqyv2dafgey" assert es['file_count'] == 0 assert es['fileset_count'] == 1 assert es['webcapture_count'] == 0 assert es['preservation'] == "dark" assert es['is_oa'] is True assert es['is_longtail_oa'] is False assert es['is_preserved'] is True assert es['in_web'] is True assert es['in_dweb'] is True assert es['in_ia'] is False assert es['in_ia_sim'] is False assert es['in_kbart'] is False assert es['in_jstor'] is False # this release has a web capture, and no file (edited the JSON to remove file) r = entity_from_json(open('./tests/files/release_mjtqtuyhwfdr7j2c3l36uor7uy.json', 'r').read(), ReleaseEntity) es = release_to_elasticsearch(r) assert es['title'] == "Rethinking Personal Digital Archiving, Part 1" assert es['ident'] == "mjtqtuyhwfdr7j2c3l36uor7uy" assert es['file_count'] == 0 assert es['fileset_count'] == 0 assert es['webcapture_count'] == 1 assert es['preservation'] == "bright" assert es['is_oa'] is True assert es['is_longtail_oa'] is False assert es['is_preserved'] is True assert es['in_web'] is True assert es['in_dweb'] is False assert es['in_ia'] is True assert es['in_ia_sim'] is False assert es['in_kbart'] is False assert es['in_jstor'] is False def test_elasticsearch_container_transform(journal_metadata_importer): with open('tests/files/journal_metadata.sample.json', 'r') as f: raw1 = json.loads(f.readline()) raw2 = json.loads(f.readline()) c1 = journal_metadata_importer.parse_record(raw1) c1.state = 'active' c2 = journal_metadata_importer.parse_record(raw2) c2.state = 'active' c1.extra['publisher_type'] = "big5" c1.extra['discipline'] = "history" es = container_to_elasticsearch(c1) assert es['publisher'] == c1.publisher assert es['discipline'] == c1.extra['discipline'] assert es['publisher_type'] == c1.extra['publisher_type'] assert es['keepers'] == [] stats = { "ident": "en4qj5ijrbf5djxx7p5zzpjyoq", "in_kbart": 11136, "in_web": 9501, "is_preserved": 11136, "issnl": "2050-084X", "preservation": { "bright": 9501, "dark": 1635, "none": 0, "shadows_only": 0, "total": 11136 }, "release_type": { "_unknown": 9, "article-journal": 11124, "editorial": 2, "letter": 1 }, "total": 11136 } es = container_to_elasticsearch(c2, stats=stats) assert es['name'] == c2.name assert es['publisher'] == c2.publisher assert es['keepers'] == list(c2.extra['kbart'].keys()) == ["portico"] assert es['any_kbart'] is True def test_elasticsearch_file_transform(): with open('./tests/files/file_bcah4zp5tvdhjl5bqci2c2lgfa.json', 'r') as f: json_str = f.read() fe = entity_from_json(json_str, FileEntity) fe.state = 'active' es = file_to_elasticsearch(fe) # pylint infers type of 'fe' incorrectly for some reason (as str/bytes) assert es['sha1'] == fe.sha1 # pylint: disable=no-member assert es['sha256'] == fe.sha256 # pylint: disable=no-member assert es['md5'] == fe.md5 # pylint: disable=no-member assert es['size_bytes'] == fe.size # pylint: disable=no-member assert es['mimetype'] == fe.mimetype # pylint: disable=no-member assert es['in_ia'] is True assert 'web' in es['rels'] assert 'www.zhros.ru' in es['hosts'] assert 'zhros.ru' in es['domains'] assert 'archive.org' in (es['hosts'] + es['domains']) assert 'web.archive.org' in (es['hosts'] + es['domains']) # old regression assert '.archive.org' not in (es['hosts'] + es['domains']) def test_elasticsearch_changelog_transform(): ce = entity_from_json(open('./tests/files/changelog_3469683.json', 'r').read(), ChangelogEntry) es = changelog_to_elasticsearch(ce) assert es['index'] == 3469683 # len("2020-01-30T05:04:39") => 19 assert es['timestamp'][:19] == "2020-01-30T05:04:39.738601Z"[:19] assert es['editor_id'] == "scmbogxw25evtcesfcab5qaboa" assert es['username'] == "crawl-bot" assert es['is_bot'] is True assert es['is_admin'] is True assert es['agent'] == "fatcat_tools.IngestFileResultImporter" assert es['total'] == 50 assert es['files'] == 50 assert es['new_files'] == 50 assert es['created'] == 50 assert es['releases'] == 0 assert es['new_releases'] == 0 assert es['updated'] == 0 assert es['deleted'] == 0 def test_elasticsearch_release_kbart_year(): this_year = datetime.date.today().year r = ReleaseEntity( title="something", release_year=this_year, license_slug="CC-BY-NC", ext_ids=ReleaseExtIds(), refs=[ ReleaseRef(), ReleaseRef(target_release_id="iznnn644szdwva7khyxqzc73bi"), ], ) r.state = 'active' r.container = ContainerEntity( name="dummy journal", extra={ "kbart": { "lockss": { "year_spans": [[1900, this_year - 2]], }, }, }, ) es = release_to_elasticsearch(r) assert es['release_year'] == this_year assert es['preservation'] == "none" assert es['is_oa'] is True assert es['is_longtail_oa'] is False assert es['is_preserved'] is False assert es['in_web'] is False assert es['in_dweb'] is False assert es['in_ia'] is False assert es['in_ia_sim'] is False assert es['in_kbart'] is False assert es['in_jstor'] is False r.container = ContainerEntity( name="dummy journal", extra={ "kbart": { "lockss": { "year_spans": [[1900, this_year - 1]], }, }, }, ) es = release_to_elasticsearch(r) assert es['release_year'] == this_year assert es['preservation'] == "dark" assert es['is_oa'] is True assert es['is_longtail_oa'] is False assert es['is_preserved'] is True assert es['in_web'] is False assert es['in_dweb'] is False assert es['in_ia'] is False assert es['in_ia_sim'] is False assert es['in_kbart'] is True assert es['in_jstor'] is False