from .elasticsearch import release_to_elasticsearch def release_ingest_request(release, oa_only=False, ingest_request_source='fatcat', ingest_type='pdf'): """ Takes a full release entity object and returns an ingest request (as dict), or None if it seems like this release shouldn't be ingested. The release entity should have the container, file, fileset, and webcapture fields set. The 'oa_only' boolean flag indicates that we should only return an ingest request if we have reason to believe this is an OA release (or, eg, in arxiv or pubmed central). Respecting this flag means we are likely to miss a lot of "hybrid" and "bronze" content, but could reduce load significantly. The type of the ingest request may depend on release type and container metadata (eg, as to whether we expect a PDF, datasets, web page), so calling code should check the returned type field. """ if release.state != 'active': return None # generate a URL where we expect to find fulltext url = None if release.ext_ids.arxiv: url = "https://arxiv.org/pdf/{}.pdf".format(release.ext_ids.arxiv) elif release.ext_ids.doi: url = "https://doi.org/{}".format(release.ext_ids.doi) elif release.ext_ids.pmcid: # TODO: how to tell if an author manuscript in PMC vs. published? #url = "https://www.ncbi.nlm.nih.gov/pmc/articles/{}/pdf/".format(release.ext_ids.pmcid) url = "http://europepmc.org/backend/ptpmcrender.fcgi?accid={}&blobtype=pdf".format(release.ext_ids.pmcid) if not url: return None ext_ids = release.ext_ids.to_dict() ext_ids = dict([(k, v) for (k, v) in ext_ids.items() if v]) if oa_only and not ext_ids.get('arxiv') and not ext_ids.get('pmcid'): es = release_to_elasticsearch(release) if not es['is_oa']: return None ingest_request = { 'ingest_type': ingest_type, 'ingest_request_source': ingest_request_source, 'base_url': url, 'fatcat': { 'release_stage': release.release_stage, 'release_ident': release.ident, 'work_ident': release.work_id, }, 'ext_ids': ext_ids, } return ingest_request