From da1daa8568be65c39265c1819d28e8796785e600 Mon Sep 17 00:00:00 2001
From: Martin Czygan <martin.czygan@gmail.com>
Date: Thu, 9 Jan 2020 16:16:20 +0100
Subject: datacite: ignore known unknown values in resourceType*

---
 python/fatcat_tools/importers/datacite.py          |  4 +-
 python/tests/files/datacite/datacite_doc_29.json   | 61 ++++++++++++++++++++++
 .../tests/files/datacite/datacite_result_29.json   | 33 ++++++++++++
 python/tests/import_datacite.py                    |  2 +-
 4 files changed, 97 insertions(+), 3 deletions(-)
 create mode 100644 python/tests/files/datacite/datacite_doc_29.json
 create mode 100644 python/tests/files/datacite/datacite_result_29.json

(limited to 'python')

diff --git a/python/fatcat_tools/importers/datacite.py b/python/fatcat_tools/importers/datacite.py
index 4128b3ca..12e0beba 100644
--- a/python/fatcat_tools/importers/datacite.py
+++ b/python/fatcat_tools/importers/datacite.py
@@ -550,9 +550,9 @@ class DataciteImporter(EntityImporter):
         resource_type = types.get('resourceType', '') or ''
         resource_type_general = types.get('resourceTypeGeneral', '') or ''
 
-        if resource_type:
+        if resource_type and resource_type.lower() not in UNKNOWN_MARKERS_LOWER:
             extra_datacite['resourceType'] = resource_type
-        if resource_type_general:
+        if resource_type_general and resource_type_general.lower() not in UNKNOWN_MARKERS_LOWER:
             extra_datacite['resourceTypeGeneral'] = resource_type_general
 
         # Include certain relations from relatedIdentifiers. Keeping the
diff --git a/python/tests/files/datacite/datacite_doc_29.json b/python/tests/files/datacite/datacite_doc_29.json
new file mode 100644
index 00000000..6646325f
--- /dev/null
+++ b/python/tests/files/datacite/datacite_doc_29.json
@@ -0,0 +1,61 @@
+{
+  "attributes": {
+    "contributors": [
+      {
+        "affiliation": [],
+        "contributorType": "Editor",
+        "familyName": "Wemmer",
+        "givenName": "David",
+        "name": "Wemmer, David",
+        "nameType": "Personal"
+      }
+    ],
+    "creators": [
+      {
+        "affiliation": [
+          "Department of pataphysics"
+        ],
+        "name": "Anton Welch",
+        "nameIdentifiers": []
+      }
+    ],
+    "dates": [
+      {
+        "date": "2017-08-24",
+        "dateType": "Created"
+      },
+      {
+        "date": "2019-08-04",
+        "dateType": "Updated"
+      },
+      {
+        "date": "2017",
+        "dateType": "Issued"
+      }
+    ],
+    "descriptions": [
+        {"description": ["Hello", "World"], "descriptionType": "Abstract"}
+    ],
+    "doi": "10.7916/d86x0cg1",
+    "isActive": true,
+    "language": "DE-CH",
+    "publicationYear": 2016,
+    "state": "findable",
+    "titles": [
+      {
+        "title": "Additional file 123: ABC"
+      },
+      {
+        "title": "DEF",
+        "titleType": "Subtitle"
+      }
+    ],
+    "types": {
+      "bibtex": "misc",
+      "citeproc": "article",
+      "ris": "GEN",
+      "schemaOrg": "CreativeWork",
+      "resourceType": "(:unav)"
+    }
+  }
+}
diff --git a/python/tests/files/datacite/datacite_result_29.json b/python/tests/files/datacite/datacite_result_29.json
new file mode 100644
index 00000000..84bed9c8
--- /dev/null
+++ b/python/tests/files/datacite/datacite_result_29.json
@@ -0,0 +1,33 @@
+{
+  "abstracts": [{"content": "Hello\nWorld", "lang": "en", "mimetype": "text/plain"}],
+  "contribs": [
+    {
+      "index": 0,
+      "raw_affiliation": "Department of pataphysics",
+      "raw_name": "Anton Welch",
+      "role": "author"
+    },
+    {
+      "extra": {
+        "type": "Editor"
+      },
+      "given_name": "David",
+      "raw_name": "David Wemmer",
+      "surname": "Wemmer"
+    }
+  ],
+  "ext_ids": {
+    "doi": "10.7916/d86x0cg1"
+  },
+  "extra": {
+    "datacite": {},
+    "release_month": 8
+  },
+  "refs": [],
+  "release_date": "2017-08-24",
+  "release_stage": "published",
+  "release_type": "stub",
+  "release_year": 2017,
+  "subtitle": "DEF",
+  "title": "Additional file 123: ABC"
+}
diff --git a/python/tests/import_datacite.py b/python/tests/import_datacite.py
index a7d514ea..d0d94b10 100644
--- a/python/tests/import_datacite.py
+++ b/python/tests/import_datacite.py
@@ -287,7 +287,7 @@ def test_datacite_conversions(datacite_importer):
     for now.
     """
     datacite_importer.debug = True
-    for i in range(29):
+    for i in range(30):
         src = 'tests/files/datacite/datacite_doc_{0:02d}.json'.format(i)
         dst = 'tests/files/datacite/datacite_result_{0:02d}.json'.format(i)
         print('testing mapping from {} => {}'.format(src, dst))
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