From 82ea0b02b29d6be0542eb43f00710a23ed8516c2 Mon Sep 17 00:00:00 2001
From: Bryan Newbold <bnewbold@robocracy.org>
Date: Wed, 15 May 2019 15:06:35 -0700
Subject: initial JSTOR importer

---
 python/parse_jstor_xml.py | 178 ----------------------------------------------
 1 file changed, 178 deletions(-)
 delete mode 100644 python/parse_jstor_xml.py

(limited to 'python/parse_jstor_xml.py')

diff --git a/python/parse_jstor_xml.py b/python/parse_jstor_xml.py
deleted file mode 100644
index 04f2b18e..00000000
--- a/python/parse_jstor_xml.py
+++ /dev/null
@@ -1,178 +0,0 @@
-
-import sys
-import json
-import datetime
-from bs4 import BeautifulSoup
-from bs4.element import NavigableString
-
-
-class JstorXmlParser():
-    """
-    Converts JSTOR bulk XML metadata (eg, from their Early Journals Collection)
-    """
-
-    def __init__(self):
-        pass
-
-    def parse_file(self, handle):
-
-        # 1. open with beautiful soup
-        soup = BeautifulSoup(handle, "xml")
-
-        # 2. iterate over articles, call parse_article on each
-        for article in soup.find_all("article"):
-            resp = self.parse_article(article)
-            print(json.dumps(resp))
-            #sys.exit(-1)
-
-    def parse_article(self, article):
-
-        journal_meta = article.front.find("journal-meta")
-        article_meta = article.front.find("article-meta")
-
-        extra = dict()
-        extra_jstor = dict()
-
-        journal_title = journal_meta.find("journal-title").string
-        publisher = journal_meta.find("publisher-name").string
-        issn = journal_meta.find("issn")
-        if issn:
-            issn = issn.string
-            if len(issn) == 8:
-                issn = "{}-{}".format(issn[0:4], issn[4:8])
-            else:
-                assert len(issn) == 9
-        container = dict(
-            name=journal_title,
-            publisher=publisher,
-            issn=issn,   # TODO: ISSN-L lookup...
-        )
-
-        doi = article_meta.find("article-id", attr={"pub-id-type": "doi"})
-        if doi:
-            doi = doi.string.lower().strip()
-
-        title = article_meta.find("article-title")
-        if title:
-            title = title.string.strip()
-            if title.endswith('.'):
-                title = title[:-1]
-
-        contribs = []
-        cgroup = article_meta.find("contrib-group")
-        if cgroup:
-            for c in cgroup.find_all("contrib"):
-                given = c.find("given-names")
-                surname = c.find("surname")
-                if given and surname:
-                    name = "{} {}".format(given.string, surname.string)
-                elif surname:
-                    name = surname.string
-                else:
-                    name = None
-                contribs.append(dict(
-                    role=c['contrib-type'],   # XXX: types? mapping?
-                    raw_name=name,
-                ))
-
-        release_year = None
-        release_date = None
-        pub_date = article_meta.find('pub-date')
-        if pub_date and pub_date.year:
-            release_year = int(pub_date.year.string)
-            if pub_date.month and pub_date.day:
-                release_date = datetime.date(
-                    release_year,
-                    int(pub_date.month.string),
-                    int(pub_date.day.string))
-        
-        volume = None
-        if article_meta.volume:
-            volume = article_meta.volume.string or None
-
-        issue = None
-        if article_meta.issue:
-            issue = article_meta.issue.string or None
-
-        pages = None
-        if article_meta.find("page-range"):
-            pages = article_meta.find("page-range").string
-        elif article_meta.fpage:
-            pages = article_meta.fpage.string
-
-        language = None
-        cm = article_meta.find("custom-meta")
-        if cm.find("meta-name").string == "lang":
-            language = cm.find("meta-value").string
-
-        release_type = "article-journal"
-        if "[Abstract]" in title:
-            release_type = "abstract"
-        elif "[Editorial" in title:
-            release_type = "editorial"
-        elif "[Letter" in title:
-            release_type = "letter"
-        elif "[Poem" in title or "[Photograph" in title:
-            release_type = None
-
-        if title.startswith("[") and title.endswith("]"):
-            # strip brackets if that is all that is there (eg, translation or non-english)
-            title = title[1:-1]
-
-        # everything in JSTOR is published
-        release_status = "published"
-
-        if extra_jstor:
-            extra['jstor'] = extra_jstor
-        if not extra:
-            extra = None
-
-        re = dict(
-            issn=issn, # not an entity field
-            #work_id
-            title=title,
-            #original_title
-            release_type=release_type,
-            release_status=release_status,
-            release_date=release_date.isoformat(),
-            release_year=release_year,
-            doi=doi,
-            #pmid
-            #pmcid
-            #isbn13     # TODO: ?
-            volume=volume,
-            issue=issue,
-            pages=pages,
-            publisher=publisher,
-            language=language,
-            #license_slug   # TODO: ?
-
-            # content, mimetype, lang
-            #abstracts=abstracts,
-
-            # raw_name, role, raw_affiliation, extra
-            contribs=contribs,
-
-            # key, year, container_name, title, locator
-            # extra: volume, authors, issue, publisher, identifiers
-            #refs=refs,
-
-            #   name, type, publisher, issnl
-            #   extra: issnp, issne, original_name, languages, country
-            container=container,
-
-            # extra:
-            #   withdrawn_date
-            #   translation_of
-            #   subtitle
-            #   aliases
-            #   container_name
-            #   group-title
-            #   pubmed: retraction refs
-            extra=extra,
-        )
-        return re
-
-if __name__=='__main__':
-    parser = JstorXmlParser()
-    parser.parse_file(open(sys.argv[1]))
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