From ba7f9214d2038882952eb50cd4dc5eff4eb0e6ff Mon Sep 17 00:00:00 2001
From: Bryan Newbold <bnewbold@robocracy.org>
Date: Tue, 9 Nov 2021 18:10:35 -0800
Subject: remove deprecated extid sqlite3 lookup table feature from importers

This was used during initial bulk imports, but is no longer used and
could create serious metadata problems if used accidentially.

In retrospect, it also made metadata provenance less transparent, and
may have done more harm than good overall.
---
 python/fatcat_import.py | 22 +---------------------
 1 file changed, 1 insertion(+), 21 deletions(-)

(limited to 'python/fatcat_import.py')

diff --git a/python/fatcat_import.py b/python/fatcat_import.py
index 445acde8..39ef200a 100755
--- a/python/fatcat_import.py
+++ b/python/fatcat_import.py
@@ -54,7 +54,6 @@ def run_crossref(args: argparse.Namespace) -> None:
     fci = CrossrefImporter(
         args.api,
         args.issn_map_file,
-        extid_map_file=args.extid_map_file,
         edit_batch_size=args.batch_size,
         bezerk_mode=args.bezerk_mode,
     )
@@ -72,7 +71,7 @@ def run_crossref(args: argparse.Namespace) -> None:
 
 
 def run_jalc(args: argparse.Namespace) -> None:
-    ji = JalcImporter(args.api, args.issn_map_file, extid_map_file=args.extid_map_file)
+    ji = JalcImporter(args.api, args.issn_map_file)
     Bs4XmlLinesPusher(ji, args.xml_file, "<rdf:Description").run()
 
 
@@ -370,7 +369,6 @@ def run_datacite(args: argparse.Namespace) -> None:
         edit_batch_size=args.batch_size,
         bezerk_mode=args.bezerk_mode,
         debug=args.debug,
-        extid_map_file=args.extid_map_file,
         insert_log_file=args.insert_log_file,
     )
     if args.kafka_mode:
@@ -494,12 +492,6 @@ def main() -> None:
         default=None,
         type=argparse.FileType("r"),
     )
-    sub_crossref.add_argument(
-        "--extid-map-file",
-        help="DOI-to-other-identifiers sqlite3 database",
-        default=None,
-        type=str,
-    )
     sub_crossref.add_argument(
         "--no-lookup-refs", action="store_true", help="skip lookup of references (PMID or DOI)"
     )
@@ -529,12 +521,6 @@ def main() -> None:
         default=None,
         type=argparse.FileType("r"),
     )
-    sub_jalc.add_argument(
-        "--extid-map-file",
-        help="DOI-to-other-identifiers sqlite3 database",
-        default=None,
-        type=str,
-    )
 
     sub_arxiv = subparsers.add_parser("arxiv", help="import arxiv.org metadata from XML files")
     sub_arxiv.set_defaults(
@@ -963,12 +949,6 @@ def main() -> None:
         default=None,
         type=argparse.FileType("r"),
     )
-    sub_datacite.add_argument(
-        "--extid-map-file",
-        help="DOI-to-other-identifiers sqlite3 database",
-        default=None,
-        type=str,
-    )
     sub_datacite.add_argument(
         "--kafka-mode", action="store_true", help="consume from kafka topic (not stdin)"
     )
-- 
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