From d5b24df069fc96d396afbb302633a077e5dbfb39 Mon Sep 17 00:00:00 2001 From: Bryan Newbold Date: Thu, 15 Apr 2021 18:34:11 -0700 Subject: first iteration of basic citation inbound/outbound views --- python/fatcat_web/__init__.py | 2 +- python/fatcat_web/ref_routes.py | 50 ++++++++++++ .../templates/release_view_fuzzy_refs.html | 95 ++++++++++++++++++++++ 3 files changed, 146 insertions(+), 1 deletion(-) create mode 100644 python/fatcat_web/ref_routes.py create mode 100644 python/fatcat_web/templates/release_view_fuzzy_refs.html diff --git a/python/fatcat_web/__init__.py b/python/fatcat_web/__init__.py index 07b4e083..3207bc75 100644 --- a/python/fatcat_web/__init__.py +++ b/python/fatcat_web/__init__.py @@ -76,7 +76,7 @@ app.register_blueprint(mwoauth.bp, url_prefix='/auth/wikipedia') app.es_client = elasticsearch.Elasticsearch(Config.ELASTICSEARCH_BACKEND) -from fatcat_web import routes, editing_routes, auth, cors, forms +from fatcat_web import routes, editing_routes, ref_routes, auth, cors, forms # TODO: blocking on ORCID support in loginpass if Config.ORCID_CLIENT_ID: diff --git a/python/fatcat_web/ref_routes.py b/python/fatcat_web/ref_routes.py new file mode 100644 index 00000000..a49813c4 --- /dev/null +++ b/python/fatcat_web/ref_routes.py @@ -0,0 +1,50 @@ +""" +Flask endpoints for reference (citation) endpoints. Eg, listing references +"inbound" and "outbound" from a specific release or work. +""" + +from typing import Optional + +from flask import render_template, abort, redirect, request +from fatcat_openapi_client import * +from fatcat_openapi_client.rest import ApiException + +from fatcat_tools.references import enrich_inbound_refs_fatcat, enrich_outbound_refs_fatcat, get_inbound_refs, get_outbound_refs +from fatcat_web import app, api, auth_api +from fatcat_web.forms import * +from fatcat_web.entity_helpers import * + + +@app.route('/release//refs/inbound', methods=['GET']) +def release_view_refs_inbound(ident): + + # lookup release ident, ensure it exists + try: + release = api.get_release(ident) + except ApiException as ae: + abort(ae.status) + + offset = request.args.get('offset', '0') + offset = max(0, int(offset)) if offset.isnumeric() else 0 + + hits = get_inbound_refs(release_ident=ident, es_client=app.es_client, offset=offset, limit=30) + enriched_refs = enrich_inbound_refs_fatcat(hits.result_refs, fatcat_api_client=api, expand="container,files,webcaptures") + + return render_template('release_view_fuzzy_refs.html', direction="inbound", entity=release, hits=hits, enriched_refs=enriched_refs), 200 + +@app.route('/release//refs/outbound', methods=['GET']) +def release_view_refs_outbound(ident): + + # lookup release ident, ensure it exists + try: + release = api.get_release(ident) + except ApiException as ae: + abort(ae.status) + + offset = request.args.get('offset', '0') + offset = max(0, int(offset)) if offset.isnumeric() else 0 + + hits = get_outbound_refs(release_ident=ident, es_client=app.es_client, offset=offset, limit=30) + enriched_refs = enrich_outbound_refs_fatcat(hits.result_refs, fatcat_api_client=api, expand="container,files,webcaptures") + + return render_template('release_view_fuzzy_refs.html', direction="outbound", entity=release, hits=hits, enriched_refs=enriched_refs), 200 diff --git a/python/fatcat_web/templates/release_view_fuzzy_refs.html b/python/fatcat_web/templates/release_view_fuzzy_refs.html new file mode 100644 index 00000000..bc1fa171 --- /dev/null +++ b/python/fatcat_web/templates/release_view_fuzzy_refs.html @@ -0,0 +1,95 @@ +{% set release = entity %} +{% set entity_view = "references" %} +{% set entity_type = "release" %} +{% import "entity_macros.html" as entity_macros %} +{% extends "entity_base.html" %} + +{% block entity_main %} + +{% if direction == "inbound" %} +

Inbound Matched References

+ Other releases citing this one +{% elif direction == "outbound" %} +

Outbound Matched References

+ This release citing other releases +{% endif %} + +

Found {{ hits.count_total }} references in {{ hits.query_wall_time_ms }}ms. +{% if hits.count_total != hits.count_returned %} + Showing {{ hits.offset + 1 }} - {{ hits.offset + hits.count_returned }} + {% if hits.offset + hits.limit < hits.count_total %} +  next... + {% endif %} +{% endif %} + + + +{% for ref in enriched_refs %} + {% set release = ref.release %} + +
+ {% if direction == "outbound" %} + {% if ref.ref.ref_key %} + [{{ ref.ref.ref_key }}] + {% endif %} + {% endif %} +
{{ ref.ref.match_status }} +
{{ ref.ref.match_provenance }} + 		+ {{ release.title }} + {% if release.release_type not in ["article-journal", "conference-paper"] %} + [{{ release.release_type or "unknown-type" }}] + {% endif %} +
+ {% for contrib in release.contribs[:5] %} + {% if contrib.creator %} + {{ contrib.creator.display_name }} + {% else %} + {{ contrib.raw_name }} + {% endif %} + {% if not loop.last %}, {% endif %} + {% endfor %} + {% if release.contribs | length > 5 %}(+ more) {%endif %} +
+ {% if release.release_year %}{{ release.release_year }}  {% endif %} + {% if release.container %} + {{ release.container.name }} + {% elif release.extra and release.extra.container_name %} + {{ release.extra.container_name }} + {% endif %} + {% if release.release_stage != "published" %} +  {{ release.release_stage or "unpublished" }} + {% endif %} + +
+ {% if release.version %} + version:{{ release.release_year }}  + {% endif %} + {% if release.number %} + number:{{ release.number }}  + {% endif %} + {% if release.ext_ids.doi %} + doi:{{ release.ext_ids.doi }}  + {% endif %} + {# TODO: links #} + {% if release.ext_ids.arxiv %} + arXiv:{{ release.ext_ids.arxiv }}  + {% endif %} + {% if release.ext_ids.pmcid %} + pmcid:{{ release.ext_ids.pmcid }}  + {% endif %} + {% if release.ext_ids.pmid %} + pmid:{{ release.ext_ids.pmid }}  + {% endif %} + {% if release.ext_ids.dblp %} + dblp:{{ release.ext_ids.dblp }}  + {% endif %} + 		+ {% if ref.access %} + {{ ref.access[0].access_type.name }} + {% endif %} +{% endfor %} +
+ +{% endblock %} + -- cgit v1.2.3