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* python makefile: tooling config updatesBryan Newbold2021-11-021-12/+13
* add pyproject.toml with isort configurationBryan Newbold2021-11-021-0/+3
* pytest: more deprecation warning ignoresBryan Newbold2021-11-021-0/+2
* update flake8 configurationBryan Newbold2021-11-021-9/+15
* pipenv: update lockfileBryan Newbold2021-11-021-404/+728
* pipenv: update ftfy to 6.xBryan Newbold2021-11-021-1/+1
* pipenv: add sentry-sdk (to make future raven removal easier)Bryan Newbold2021-11-021-0/+1
* pipenv: pin elasticsearch client to prevent UnsupportedProductErrorBryan Newbold2021-11-021-1/+3
* pipenv: additional dev tools (black, types, isort, mypy)Bryan Newbold2021-11-021-0/+11
* small python tweaks for annotations, importsBryan Newbold2021-11-023-3/+7
* try some type annotationsBryan Newbold2021-11-024-70/+79
* reviewer: add annotations required by mypyBryan Newbold2021-11-021-2/+3
* temporary hack around filesets.manifest order instabilityBryan Newbold2021-11-021-3/+4
* fix missing variable in fileset ingestBryan Newbold2021-11-021-2/+1
* web: improve git version generationBryan Newbold2021-11-021-1/+1
* Merge branch 'bnewbold-import-fileset'Bryan Newbold2021-11-029-4/+507
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| * WIP: more fileset ingestBryan Newbold2021-10-181-13/+21
| * python: gitignore moreBryan Newbold2021-10-151-0/+2
| * WIP: rel fixesBryan Newbold2021-10-141-6/+6
| * fileset ingest small tweaksBryan Newbold2021-10-141-21/+36
| * initial implementation of fileset ingest importersBryan Newbold2021-10-143-3/+298
| * ingest: handle datasets, components, other ingest typesBryan Newbold2021-10-141-1/+15
| * generic fileset importer class, with test coverageBryan Newbold2021-10-146-0/+169
* | Merge branch 'bnewbold-match-get'Bryan Newbold2021-11-024-9/+60
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| * | match: fix access_options in returnBryan Newbold2021-10-181-3/+7
| * | access: populate thumbnail_url for PDFsBryan Newbold2021-10-181-3/+9
| * | add GET w/ query params to reference match endpoint (and JSON version)Bryan Newbold2021-10-183-6/+47
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* / pubmed: switch default http site to retrieve update filesMartin Czygan2021-10-151-2/+4
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* web: minor typo correctionBryan Newbold2021-10-131-1/+1
* web: editor username /u/<username> helperBryan Newbold2021-10-132-0/+16
* web: container lookup and display featuresBryan Newbold2021-10-133-7/+13
* python: additional test coverage for v0.4 changesBryan Newbold2021-10-132-2/+19
* dblp import: basic support for handles as identifiersBryan Newbold2021-10-131-1/+5
* python: normalization/validation support for handle identifiers (hdl)Bryan Newbold2021-10-131-0/+33
* dblp import: fix typos in identifier parsingBryan Newbold2021-10-131-2/+1
* python: partial importer utilization of new schema changesBryan Newbold2021-10-133-6/+18
* python: test coverage of rust schema changesBryan Newbold2021-10-134-2/+59
* python: implement ES schema changesBryan Newbold2021-10-131-4/+17
* web: implement new schema changesBryan Newbold2021-10-136-11/+45
* Merge branch 'bnewbold-ingest-tweaks' into 'master'bnewbold2021-10-024-39/+139
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| * kafka import: optional 'force-flush' mode for some importersBryan Newbold2021-10-012-0/+16
| * new SPN web (html) importerBryan Newbold2021-10-013-27/+111
| * ingest importer behavior tweaksBryan Newbold2021-10-011-8/+8
| * importer common: more verbose logging (with counts)Bryan Newbold2021-10-011-4/+4
* | datacite: skip empty abstractsMartin Czygan2021-10-014-2/+95
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* default ingest request topic now '-daily'; configurable for ingest_tool.pyBryan Newbold2021-09-304-4/+9
* Merge branch 'martin-pubmed-ftp-extramuros' into 'master'Martin Czygan2021-09-091-24/+21
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| * pubmed: workaround a networking issueMartin Czygan2021-09-091-24/+21
* | trivial blank line lintBryan Newbold2021-09-081-1/+0
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* pubmed: add option to ftp download with lftpMartin Czygan2021-09-081-2/+31
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