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* | Merge branch 'bnewbold-cleanups-nov2021' into 'master'bnewbold2021-11-115-1/+749
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| * | file/release bugfix: handle files with multiple editsBryan Newbold2021-11-091-6/+6
| * | cleanups: add more state=active checksBryan Newbold2021-11-092-0/+8
| * | update link source filters in file/release bugfixBryan Newbold2021-11-091-2/+8
| * | initial file/release bugfix cleanup worker and notesBryan Newbold2021-11-091-0/+231
| * | updates to lowercase DOI cleanupBryan Newbold2021-11-091-7/+15
| * | lowercase DOI lint and check entity statusBryan Newbold2021-11-091-4/+5
| * | more iteration on short wayback timestamp cleanupBryan Newbold2021-11-091-1/+1
| * | lint: minor import tweakBryan Newbold2021-11-091-1/+1
| * | cleanups: tweaks to wayback CDX cleanup scriptsBryan Newbold2021-11-091-5/+13
| * | cleanups: initial lowercase DOI cleanup scriptBryan Newbold2021-11-091-0/+145
| * | wayback short ts: another regression test, and some small fmt/tweaksBryan Newbold2021-11-091-3/+38
| * | wayback cleanup: actually update entityBryan Newbold2021-11-091-2/+4
| * | imports: generic file cleanup removes exact duplicate URLsBryan Newbold2021-11-091-0/+9
| * | wayback short ts: add regression test for dupe URLsBryan Newbold2021-11-091-0/+44
| * | short wayback ts: initial cleanup script implementationBryan Newbold2021-11-091-0/+251
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* / pubmed: allow updates if PMCID does not exist yetBryan Newbold2021-11-101-1/+6
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* python tests: verify array sort orderBryan Newbold2021-11-054-20/+18
* enable type annotation checking with flake8 by default ('make lint')Bryan Newbold2021-11-031-4/+2
* cleanups: create a separate JsonLinePusher for cleanup workers (distinct base...Bryan Newbold2021-11-033-4/+20
* facat_import.py: work around corner case in run_cdl_dash_dat()Bryan Newbold2021-11-031-1/+1
* datacite importer: remove unused 'year_only' variableBryan Newbold2021-11-031-2/+3
* web: work around remaining type annotation issuesBryan Newbold2021-11-032-11/+15
* ignore type errors in cors.py (third party code)Bryan Newbold2021-11-031-2/+2
* web: fix bytes/text warning loggingBryan Newbold2021-11-031-3/+3
* lint: remove unused importBryan Newbold2021-11-031-1/+0
* web config: add helper for coercing env vars into booleansBryan Newbold2021-11-031-3/+32
* web: add type annotationsBryan Newbold2021-11-0312-297/+347
* introduce 'AnyResponse' type for Flask viewsBryan Newbold2021-11-032-0/+15
* pubmed harvester: remove unused variablesBryan Newbold2021-11-031-2/+2
* pubmed harvester: explicit assertions to mark unreachable code pathsBryan Newbold2021-11-031-0/+2
* typing: add assertions to fatcat_tool code to make type assumptions explicitBryan Newbold2021-11-033-0/+3
* typing: add annotations to remaining fatcat_tools codeBryan Newbold2021-11-039-122/+186
* datacite: add comment about potential date parsing bugBryan Newbold2021-11-031-0/+1
* datacite importer: dateparser.date.DateDataParser()Bryan Newbold2021-11-031-1/+1
* more involved type wrangling and fixes for importersBryan Newbold2021-11-033-12/+14
* typing: relatively simple type check fixesBryan Newbold2021-11-0314-87/+82
* typing: initial annotations on importersBryan Newbold2021-11-0322-274/+443
* typing: first batch of python bulk type annotationsBryan Newbold2021-11-0321-139/+200
* importers: remove unused __main__ routineBryan Newbold2021-11-034-19/+0
* lint: resolve existing mypy type errorsBryan Newbold2021-11-0212-81/+125
* web: annotate 'app' as 'Any', and document whyBryan Newbold2021-11-021-1/+5
* flake8 config: update ignore list after big fmtBryan Newbold2021-11-021-3/+4
* re-fix some lint issues after big 'fmt'Bryan Newbold2021-11-022-4/+5
* fmt (black): fatcat_tools/Bryan Newbold2021-11-0243-3194/+4020
* fmt (black): fatcat_web/Bryan Newbold2021-11-0213-1297/+1992
* fmt (black): *.pyBryan Newbold2021-11-0211-715/+1110
* fmt (black): tests/Bryan Newbold2021-11-0255-1430/+1852
* python: isort everythingBryan Newbold2021-11-0285-184/+278
* revert '-vv' for pytest in Makefile (too verbose)Bryan Newbold2021-11-021-1/+1
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