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| * datacite: include doi in error messagesMartin Czygan2019-12-281-8/+8
| * remove langcodes dependencyMartin Czygan2019-12-282-15/+0
| * datacite: limit abstract lengthMartin Czygan2019-12-281-0/+6
| * datacite: use iso 639-1 codesMartin Czygan2019-12-281-7/+4
| * datacite: use specific auth varMartin Czygan2019-12-281-1/+1
| * datacite: add missing --extid-map-file flagMartin Czygan2019-12-281-0/+4
| * address first round of MR14 commentsMartin Czygan2019-12-284-150/+503
| * datacite: move common date patterns out of the loopMartin Czygan2019-12-281-3/+4
| * improve datacite field mapping and importMartin Czygan2019-12-285-59/+245
| * datacite: add missing mappings and notesMartin Czygan2019-12-281-266/+175
| * datacite: basic field mappingsMartin Czygan2019-12-281-41/+181
| * datacite: importer skeletonMartin Czygan2019-12-284-0/+514
* | importers: control update behavior with more-standard flagBryan Newbold2020-01-066-3/+15
* | pipenv: update pytest to 5.x; remove langcodesBryan Newbold2020-01-032-108/+85
* | pytest: explicitly indicate all in-scope test filesBryan Newbold2020-01-031-3/+1
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* orcid: skip non-person ORCID recordsBryan Newbold2019-12-261-0/+4
* datacite: fix harvest testMartin Czygan2019-12-271-1/+1
* datacite: add simple test and fixture for datacite api interactionMartin Czygan2019-12-272-0/+46
* datacite: extend range search queryMartin Czygan2019-12-271-1/+1
* avoid usage of short linksMartin Czygan2019-12-271-2/+2
* Datacite API v2 throws 400, we cannot recover from, currently.Martin Czygan2019-12-271-0/+4
* datacite: update documentation, add links to issuesMartin Czygan2019-12-271-10/+5
* datacite: use v2 of the API (flaky)Martin Czygan2019-12-271-5/+28
* transform ingests via pmc/pmcid, not pubmed/pmidBryan Newbold2019-12-241-4/+4
* allow arabesque backfill ingests for some source typesBryan Newbold2019-12-241-0/+5
* make chocula URL updates more conservativeBryan Newbold2019-12-241-5/+5
* pubmed: if doing update, also do subtitle schema updateBryan Newbold2019-12-231-1/+9
* doi parsing fixesBryan Newbold2019-12-231-0/+7
* pubmed: improve warning and stderr formattingBryan Newbold2019-12-231-5/+6
* pubmed: use standard identifier cleanersBryan Newbold2019-12-231-17/+14
* pubmed: remove unused extid mapping codeBryan Newbold2019-12-231-29/+0
* pubmed: do reference lookups by defaultBryan Newbold2019-12-231-1/+1
* normalizers: clean_pmid(), and handle nulls in all other cleanersBryan Newbold2019-12-231-0/+31
* pubmed: null doi parsing checkBryan Newbold2019-12-231-1/+1
* add basic MedlineDate year parsingBryan Newbold2019-12-231-0/+11
* add regression test for medlinedate -> year parsingBryan Newbold2019-12-232-0/+102
* fix spn/ingest importer duplication checkBryan Newbold2019-12-221-6/+8
* datacite release links and metadata expansionBryan Newbold2019-12-202-9/+13
* spn: incluce link_source/link_source_id in ingest requestBryan Newbold2019-12-201-0/+2
* pipenv: update depsBryan Newbold2019-12-172-11/+55
* pipenv: restrict pytest<5.0.0Bryan Newbold2019-12-172-5/+13
* pipenv: update Pipfile and Pipfile.lockBryan Newbold2019-12-172-286/+318
* pipfile: add langcodes and dateparser dependenciesBryan Newbold2019-12-172-1/+44
* write diagnostic messages to stderrMartin Czygan2019-12-161-2/+2
* Merge branch 'martin-importers-common-doc-fix' into 'master'Martin Czygan2019-12-141-13/+10
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| * complete parse_record docstringMartin Czygan2019-12-141-0/+6
| * Update EntityImporter docstring.Martin Czygan2019-12-131-13/+4
* | add ingest import file collision protectionBryan Newbold2019-12-131-0/+6
* | fix spn kafka topic env varBryan Newbold2019-12-131-1/+1
* | update ingest request schemaBryan Newbold2019-12-135-16/+44
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