Commit message (Collapse) | Author | Age | Files | Lines | |
---|---|---|---|---|---|
* | ES schema: add best_url to file schema | Bryan Newbold | 2020-06-04 | 1 | -0/+12 |
| | | | | | | | | | This will increase index size (URLs are often long in our corpus, and we have many file entities), but seems worth it. Initially added `ia_url` as a second field, guaranteed to always be an *.archive.org URL, but `best_url` defaults to that anyways so didn't seem worthwhile. | ||||
* | improve citeproc/CSL web interface | Bryan Newbold | 2020-03-25 | 1 | -6/+12 |
| | | | | | | | | | | | | | | This tries to show the citeproc (bibtext, MLA, CSL-JSON) options for more releases, and not show the links when they would break. The primary motivation here is to work around two exceptions being thrown in prod every day (according to sentry): KeyError: 'role' ValueError: CLS requries some surname (family name) I'm guessing these are mostly coming from crawlers following the citeproc links on release landing pages. | ||||
* | Merge branch 'bnewbold-elastic-v03b' | Bryan Newbold | 2020-02-26 | 2 | -46/+198 |
|\ | |||||
| * | improve is_oa flag accuracy | Bryan Newbold | 2020-02-26 | 1 | -8/+4 |
| | | | | | | | | | | | | Particularly, the ezb=green match seems mostly incorrect. Note that pmcid being assigned could still be in an embargo window? | ||||
| * | ES container last tweaks | Bryan Newbold | 2020-02-26 | 1 | -0/+3 |
| | | |||||
| * | ES release: last minor tweaks | Bryan Newbold | 2020-02-26 | 1 | -2/+2 |
| | | |||||
| * | ES files: don't remove archive.org domains/hosts | Bryan Newbold | 2020-02-07 | 1 | -5/+0 |
| | | |||||
| * | ES releases: host/domain fixes | Bryan Newbold | 2020-01-31 | 1 | -2/+2 |
| | | |||||
| * | fix release es transform missing 'issue' | Bryan Newbold | 2020-01-30 | 1 | -0/+1 |
| | | |||||
| * | add upper-case work-around from kibana map join | Bryan Newbold | 2020-01-30 | 1 | -0/+1 |
| | | |||||
| * | tweak file ES archive.org domain tracking | Bryan Newbold | 2020-01-30 | 1 | -0/+6 |
| | | |||||
| * | implement host+domain parsing for file ES transform | Bryan Newbold | 2020-01-30 | 1 | -9/+5 |
| | | |||||
| * | fix ES file schema plural field names | Bryan Newbold | 2020-01-29 | 1 | -4/+3 |
| | | |||||
| * | elastic schema fixes | Bryan Newbold | 2020-01-29 | 1 | -0/+5 |
| | | |||||
| * | add country to v03b release schema | Bryan Newbold | 2020-01-29 | 1 | -0/+2 |
| | | |||||
| * | actually implement changelog transform | Bryan Newbold | 2020-01-29 | 1 | -17/+45 |
| | | |||||
| * | fix some transform bugs, add some tests | Bryan Newbold | 2020-01-29 | 1 | -6/+8 |
| | | |||||
| * | ES release schema updates | Bryan Newbold | 2020-01-29 | 1 | -5/+76 |
| | | |||||
| * | container ES schema changes | Bryan Newbold | 2020-01-29 | 1 | -16/+18 |
| | | |||||
| * | first implementation of ES file schema | Bryan Newbold | 2020-01-29 | 2 | -1/+46 |
| | | | | | | | | | | Includes a trivial test and transform, but not any workers or doc updates. | ||||
* | | default to PMC ingest URLs over DOI | Bryan Newbold | 2020-02-04 | 1 | -4/+4 |
|/ | | | | | | | For cases where there might be both PMC and DOI urls, do the europmc.org PMC ones over DOI option. May want to turn this into a config or command-line option in the future. | ||||
* | remove 'oa_only' feature from ingest transform | Bryan Newbold | 2020-01-28 | 1 | -14/+1 |
| | | | | Refactoring to move this filter elsewhere | ||||
* | transform ingests via pmc/pmcid, not pubmed/pmid | Bryan Newbold | 2019-12-24 | 1 | -4/+4 |
| | |||||
* | update ingest request schema | Bryan Newbold | 2019-12-13 | 1 | -5/+22 |
| | | | | | This is mostly changing ingest_type from 'file' to 'pdf', and adding 'link_source'/'link_source_id', plus some small cleanups. | ||||
* | tweaks to ingest-file transform | Bryan Newbold | 2019-12-12 | 1 | -13/+7 |
| | |||||
* | project -> ingest_request_source | Bryan Newbold | 2019-11-15 | 1 | -2/+2 |
| | |||||
* | fix release.pmcid typo | Bryan Newbold | 2019-11-15 | 1 | -2/+2 |
| | |||||
* | more ingest importer comments and counts | Bryan Newbold | 2019-11-15 | 1 | -1/+1 |
| | |||||
* | add ingest request transform (and test) | Bryan Newbold | 2019-11-15 | 2 | -0/+67 |
| | |||||
* | dict wrapper for entity_from_json() | Bryan Newbold | 2019-10-08 | 2 | -3/+7 |
| | |||||
* | refactor all python source for client lib name | Bryan Newbold | 2019-09-05 | 3 | -3/+3 |
| | |||||
* | comment clarifying container.ident in ES release transform | Bryan Newbold | 2019-09-03 | 1 | -0/+2 |
| | |||||
* | fix previous fix (need tests) | Bryan Newbold | 2019-09-03 | 1 | -2/+2 |
| | |||||
* | fix typo bug in container ES transform | Bryan Newbold | 2019-09-03 | 1 | -2/+2 |
| | |||||
* | use EZB and szczepanski as OA signals (ES) | Bryan Newbold | 2019-09-03 | 1 | -0/+12 |
| | |||||
* | elasticsearch transform: fix url.url bug | Bryan Newbold | 2019-05-24 | 1 | -11/+11 |
| | |||||
* | add 'superceded' release extra flag to elastic schema | Bryan Newbold | 2019-05-23 | 1 | -0/+1 |
| | |||||
* | also track work_id in release elasticsearch table | Bryan Newbold | 2019-05-22 | 1 | -0/+1 |
| | |||||
* | count linked refs (not just raw refs) in elasticsearch | Bryan Newbold | 2019-05-22 | 1 | -0/+3 |
| | |||||
* | include creator_ids in release elastic schema | Bryan Newbold | 2019-05-20 | 1 | -0/+6 |
| | | | | Intent is to allow fast creator search/lookup | ||||
* | elastic release schema update | Bryan Newbold | 2019-05-20 | 1 | -2/+5 |
| | |||||
* | improved CSL transform (structured author names) | Bryan Newbold | 2019-05-20 | 1 | -12/+11 |
| | |||||
* | make some XXX into TODO | Bryan Newbold | 2019-05-20 | 1 | -2/+2 |
| | |||||
* | fix elastic file pdf check | Bryan Newbold | 2019-05-16 | 1 | -1/+3 |
| | |||||
* | elastic transforms: work around missing pdf mimetypes | Bryan Newbold | 2019-05-15 | 1 | -1/+1 |
| | |||||
* | partial python impl of ext_id and release_stage refactors | Bryan Newbold | 2019-05-13 | 2 | -14/+15 |
| | |||||
* | handle null abstracts for release | Bryan Newbold | 2019-05-07 | 1 | -1/+1 |
| | |||||
* | improve test coverage | Bryan Newbold | 2019-04-04 | 1 | -0/+1 |
| | |||||
* | expose bibtex and citeproc; revert /unstable/ prefixes | Bryan Newbold | 2019-03-18 | 1 | -1/+1 |
| | |||||
* | refactor and test citeproc code | Bryan Newbold | 2019-03-18 | 2 | -3/+55 |
| |