Commit message (Collapse) | Author | Age | Files | Lines | |
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* | importers: use clean_doi() in many more (all?) importers | Bryan Newbold | 2021-11-09 | 6 | -12/+29 |
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* | remove deprecated extid sqlite3 lookup table feature from importers | Bryan Newbold | 2021-11-09 | 3 | -160/+0 |
| | | | | | | | | This was used during initial bulk imports, but is no longer used and could create serious metadata problems if used accidentially. In retrospect, it also made metadata provenance less transparent, and may have done more harm than good overall. | ||||
* | datacite importer: remove unused 'year_only' variable | Bryan Newbold | 2021-11-03 | 1 | -2/+3 |
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* | datacite: add comment about potential date parsing bug | Bryan Newbold | 2021-11-03 | 1 | -0/+1 |
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* | datacite importer: dateparser.date.DateDataParser() | Bryan Newbold | 2021-11-03 | 1 | -1/+1 |
| | | | | Perhaps this was a change when upgrading 'dateparser'? | ||||
* | more involved type wrangling and fixes for importers | Bryan Newbold | 2021-11-03 | 3 | -12/+14 |
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* | typing: relatively simple type check fixes | Bryan Newbold | 2021-11-03 | 14 | -87/+82 |
| | | | | | | | These mostly add new variable names so that existing variables aren't overwritten with a new type; delay coercing '{}' or '[]' to 'None' until the last minute; adding is-not-None checks to conditional clauses; and similar small changes. | ||||
* | typing: initial annotations on importers | Bryan Newbold | 2021-11-03 | 22 | -274/+443 |
| | | | | | This commit just adds the type annotations, doesn't do fixes to code to make type checking pass. | ||||
* | importers: remove unused __main__ routine | Bryan Newbold | 2021-11-03 | 4 | -19/+0 |
| | | | | | | These perhaps were used in initial develoment or testing? fatcat_import.py is the correct way to do these imports, even for testing/development. | ||||
* | lint: resolve existing mypy type errors | Bryan Newbold | 2021-11-02 | 3 | -22/+27 |
| | | | | | | | | | Adds annotations and re-workes dataflow to satisfy existing mypy issues, without adding any additional type annotations to, eg, function signatures. There will probably be many more type errors when annotations are all added. | ||||
* | re-fix some lint issues after big 'fmt' | Bryan Newbold | 2021-11-02 | 1 | -2/+2 |
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* | fmt (black): fatcat_tools/ | Bryan Newbold | 2021-11-02 | 22 | -2115/+2578 |
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* | python: isort everything | Bryan Newbold | 2021-11-02 | 17 | -41/+70 |
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* | arabesque import 'hit' field is 1/0, not true/false | Bryan Newbold | 2021-11-02 | 1 | -2/+2 |
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* | lint: simple, safe inline lint fixes | Bryan Newbold | 2021-11-02 | 12 | -22/+21 |
| | | | | '==' vs 'is'; 'not a in b' vs 'a not in b'; etc | ||||
* | lint/fmt: remove all 'import *' | Bryan Newbold | 2021-11-02 | 5 | -21/+41 |
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* | re-fmt all the fatcat_tools __init__ files for readability | Bryan Newbold | 2021-11-02 | 1 | -17/+39 |
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* | small python tweaks for annotations, imports | Bryan Newbold | 2021-11-02 | 2 | -2/+6 |
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* | try some type annotations | Bryan Newbold | 2021-11-02 | 2 | -55/+63 |
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* | fix missing variable in fileset ingest | Bryan Newbold | 2021-11-02 | 1 | -2/+1 |
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* | WIP: more fileset ingest | Bryan Newbold | 2021-10-18 | 1 | -13/+21 |
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* | WIP: rel fixes | Bryan Newbold | 2021-10-14 | 1 | -6/+6 |
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* | fileset ingest small tweaks | Bryan Newbold | 2021-10-14 | 1 | -21/+36 |
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* | initial implementation of fileset ingest importers | Bryan Newbold | 2021-10-14 | 2 | -3/+224 |
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* | generic fileset importer class, with test coverage | Bryan Newbold | 2021-10-14 | 3 | -0/+88 |
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* | dblp import: basic support for handles as identifiers | Bryan Newbold | 2021-10-13 | 1 | -1/+5 |
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* | dblp import: fix typos in identifier parsing | Bryan Newbold | 2021-10-13 | 1 | -2/+1 |
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* | python: partial importer utilization of new schema changes | Bryan Newbold | 2021-10-13 | 3 | -6/+18 |
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* | Merge branch 'bnewbold-ingest-tweaks' into 'master' | bnewbold | 2021-10-02 | 3 | -39/+106 |
|\ | | | | | | | | | ingest importer behavior tweaks See merge request webgroup/fatcat!120 | ||||
| * | kafka import: optional 'force-flush' mode for some importers | Bryan Newbold | 2021-10-01 | 1 | -0/+13 |
| | | | | | | | | Behavior and motivation described in the kafka json import comment. | ||||
| * | new SPN web (html) importer | Bryan Newbold | 2021-10-01 | 2 | -27/+81 |
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| * | ingest importer behavior tweaks | Bryan Newbold | 2021-10-01 | 1 | -8/+8 |
| | | | | | | | | | | - change order of 'want()' checks, so that result counts are clearer - don't require GROBID success for file imports with SPN | ||||
| * | importer common: more verbose logging (with counts) | Bryan Newbold | 2021-10-01 | 1 | -4/+4 |
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* | | datacite: skip empty abstracts | Martin Czygan | 2021-10-01 | 1 | -1/+4 |
|/ | | | | | Do not add abstracts where `clean` results in the empty string - this violates a constraint: `either abstract_sha1 or content is required` | ||||
* | more consistent and defensive lower-casing of DOIs | Bryan Newbold | 2021-06-23 | 2 | -1/+6 |
| | | | | | | | After noticing more upper/lower ambiguity in production. In particular, we have some old ingest requests in sandcrawler DB, which get re-submitted/re-tried, which have capitalized DOIs in the link source id field. | ||||
* | datacite: more careful title string access; fixes sentry #88350 | Martin Czygan | 2021-06-11 | 1 | -1/+1 |
| | | | | | Caused by a partial "title entry without title" coming *first* (e.g. just holding, e.g. a language, like: {'lang': 'da'} | ||||
* | ingest: swap ingest and file checks, to result in clearer stats/counts of ↵ | Bryan Newbold | 2021-06-03 | 1 | -2/+2 |
| | | | | skipping | ||||
* | ingest: don't accept mag and s2 URLs | Bryan Newbold | 2021-06-03 | 1 | -4/+4 |
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* | small python lint fixes (no behavior change) | Bryan Newbold | 2021-05-25 | 1 | -2/+0 |
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* | arabesque importer: ensure full 14-digit timestamps | Bryan Newbold | 2021-05-21 | 1 | -1/+3 |
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* | datacite: a missing surname should be None, not the empty string | Martin Czygan | 2021-04-02 | 1 | -2/+1 |
| | | | | refs sentry #77700 | ||||
* | web ingest: terminal URL mismatch as skip, not assert | Bryan Newbold | 2020-12-30 | 1 | -1/+3 |
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* | dblp release import: skip arxiv_id releases | Bryan Newbold | 2020-12-24 | 1 | -0/+9 |
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* | dblp import: fix arxiv_id typo | Bryan Newbold | 2020-12-23 | 1 | -1/+1 |
| | | | | Would have been caught by mypy! | ||||
* | ingest: allow dblp imports | Bryan Newbold | 2020-12-23 | 1 | -1/+1 |
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* | fuzzy: set 120 second timeout on ES lookups | Bryan Newbold | 2020-12-23 | 1 | -1/+1 |
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* | dblp: polish HTML scrape/extract pipeline | Bryan Newbold | 2020-12-17 | 1 | -0/+14 |
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* | dblp: flesh out update code path (especially to add container_id linkage) | Bryan Newbold | 2020-12-17 | 1 | -2/+6 |
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* | dblp: run fuzzy matching at try_update time (same as DOAJ) | Bryan Newbold | 2020-12-17 | 1 | -1/+8 |
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* | improve dblp release import | Bryan Newbold | 2020-12-17 | 1 | -1/+2 |
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