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* | | finally update CHANGELOG for actual v0.3.3 tag/releasev0.3.3 | Bryan Newbold | 2020-12-24 | 1 | -15/+16 | |
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* | | rust openapi lib: bump version to v0.3.3 | Bryan Newbold | 2020-12-24 | 1 | -1/+1 | |
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* | | rust: update lazy_static dependency | Bryan Newbold | 2020-12-24 | 3 | -35/+26 | |
| | | | | | | | | | | The motivation for this is to quiet very verbose warnings about some deprecated use of std::sync. Expect no actual runtime/behavior change. | |||||
* | | dblp release import: skip arxiv_id releases | Bryan Newbold | 2020-12-24 | 1 | -0/+9 | |
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* | | normalizer: test for un-versioned arxiv_id | Bryan Newbold | 2020-12-24 | 1 | -0/+4 | |
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* | | dblp import: fix arxiv_id typo | Bryan Newbold | 2020-12-23 | 1 | -1/+1 | |
| | | | | | | | | Would have been caught by mypy! | |||||
* | | ingest: allow dblp imports | Bryan Newbold | 2020-12-23 | 1 | -1/+1 | |
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* | | fuzzy: set 120 second timeout on ES lookups | Bryan Newbold | 2020-12-23 | 1 | -1/+1 | |
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* | | DOAJ import notes, and SQL/stats update | Bryan Newbold | 2020-12-23 | 5 | -0/+109 | |
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* | dblp: polish HTML scrape/extract pipeline | Bryan Newbold | 2020-12-17 | 4 | -3/+30 | |
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* | dblp: flesh out update code path (especially to add container_id linkage) | Bryan Newbold | 2020-12-17 | 1 | -2/+6 | |
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* | dblp: run fuzzy matching at try_update time (same as DOAJ) | Bryan Newbold | 2020-12-17 | 1 | -1/+8 | |
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* | small dblp proposal updates | Bryan Newbold | 2020-12-17 | 1 | -5/+2 | |
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* | dblp: script and notes on container metadata generation | Bryan Newbold | 2020-12-17 | 4 | -0/+134 | |
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* | improve dblp release import | Bryan Newbold | 2020-12-17 | 3 | -4/+17 | |
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* | very simple dblp container importer | Bryan Newbold | 2020-12-17 | 7 | -7/+256 | |
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* | dblp release importer: container_id lookup TSV, and dump JSON mode | Bryan Newbold | 2020-12-17 | 2 | -13/+73 | |
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* | commit DBLP proposal progress | Bryan Newbold | 2020-12-17 | 1 | -7/+10 | |
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* | dblp import proposal | Bryan Newbold | 2020-12-17 | 1 | -0/+159 | |
| | | | | | Had notes on this floating around since August (not in git), but mostly rewrote these in past couple days. | |||||
* | basic test coverage of dblp release importer | Bryan Newbold | 2020-12-17 | 4 | -0/+503 | |
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* | wikidata QID normalize helper | Bryan Newbold | 2020-12-17 | 1 | -2/+24 | |
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* | initial implementation of dblp release importer (in progress) | Bryan Newbold | 2020-12-17 | 3 | -0/+474 | |
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* | add 'lxml' mode for large XML file import, and multi-tags | Bryan Newbold | 2020-12-17 | 3 | -19/+31 | |
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* | rust: fix malformed ext id error type | Bryan Newbold | 2020-12-17 | 1 | -2/+2 | |
| | | | | This bug was due to copy/paste of SHA-1 check | |||||
* | rust: rename and improve dblp key (id) syntax check | Bryan Newbold | 2020-12-17 | 2 | -9/+17 | |
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* | fix sloppy is_preserved ES transfom test failure | Bryan Newbold | 2020-12-17 | 1 | -1/+1 | |
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* | DOAJ import notes | Bryan Newbold | 2020-12-17 | 2 | -2/+23 | |
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* | add dblp as an ingest source and identifier | Bryan Newbold | 2020-12-17 | 1 | -1/+2 | |
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* | ingest: allow doaj ingest responses | Bryan Newbold | 2020-12-17 | 1 | -1/+2 | |
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* | bug fix: is_preserved should always be bool | Bryan Newbold | 2020-12-17 | 1 | -2/+2 | |
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* | Merge branch 'bnewbold-doaj-fuzzy' into 'master' | bnewbold | 2020-12-18 | 7 | -267/+544 | |
|\ | | | | | | | | | DOAJ import fuzzy match filter See merge request webgroup/fatcat!92 | |||||
| * | update fuzzy helper to pass 'reason' through to import code | Bryan Newbold | 2020-12-17 | 2 | -5/+5 | |
| | | | | | | | | | | The motivation for this change is to enable passing the 'reason' through to edit extra metadata, in cases where we merge or cluster releases. | |||||
| * | pipenv: bump fuzzycat to 0.1.9 | Bryan Newbold | 2020-12-17 | 2 | -5/+5 | |
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| * | add fuzzy match filtering to DOAJ importer | Bryan Newbold | 2020-12-16 | 2 | -4/+23 | |
| | | | | | | | | | | | | | | | | | | | | | | In this default configuration, any entities with a fuzzy match (even "ambiguous") will be skipped at import time, to prevent creating duplicates. This is conservative towards not creating new/duplicate entities. In the future, as we get more confidence in fuzzy match/verification, we can start to ignore AMBIGUOUS, handle EXACT as same release, and merge STRONG (and WEAK?) matches under the same work entity. | |||||
| * | add fuzzy matching helper to importer base class | Bryan Newbold | 2020-12-16 | 3 | -2/+147 | |
| | | | | | | | | Using fuzzycat. Add basic test coverage. | |||||
| * | pipenv: add fuzzycat dependency | Bryan Newbold | 2020-12-16 | 2 | -261/+374 | |
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* | | Merge pull request #65 from ibnesayeed/patch-1 | bnewbold | 2020-12-17 | 1 | -1/+1 | |
|\ \ | | | | | | | Improve status counting efficiency | |||||
| * | | Improve status counting efficiency | Sawood Alam | 2020-12-17 | 1 | -1/+1 | |
| | | | | | | | | | When the input is large with a small number of unique items to be counted then counting as we go would be linear and more efficient approach than sorting and unique counting. | |||||
* | | | Merge branch 'bnewbold-es-transform-html' into 'master' | Martin Czygan | 2020-12-17 | 5 | -146/+296 | |
|\ \ \ | |_|/ |/| | | | | | | | | Elasticsearch release transform updates: handle webcaptures better, and refactoring See merge request webgroup/fatcat!91 | |||||
| * | | entity update worker: treat fileset and webcapture updates like file updates | Bryan Newbold | 2020-12-16 | 1 | -3/+25 | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | When webcapture or fileset entities are updated, then the release entities associated with them also need to be updated (and work entities, recursively). A TODO is to handle the case where a release_id is *removed* as well as *added*, and reprocess the releases in that case as well. | |||||
| * | | fix indentation | Bryan Newbold | 2020-12-16 | 1 | -2/+2 | |
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| * | | have release elasticsearch transform count webcaptures and filesets towards ↵ | Bryan Newbold | 2020-12-16 | 1 | -26/+57 | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | preservation These are simple/partial changes to have webcaptures and filesets show up in 'preservation', 'in_ia', and 'in_web' ES schema flags. A longer-term TODO is to update the ES schema to have more granular analytic flags. Also includes a small generalization refactor for URL object parsing into preservation status, shared across file+fileset+webcapture entity types (all have similar URL objects with url+rel fields). | |||||
| * | | improve release elasticsearch transform test coverage | Bryan Newbold | 2020-12-16 | 3 | -11/+86 | |
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| * | | small release_to_elasticsearch refactors | Bryan Newbold | 2020-12-16 | 1 | -7/+12 | |
| | | | | | | | | | | | | | | | | | | | | | These should have almost no change in behavior, but improve code quality. The one behavior change is counting ftp URLs as "in_web" | |||||
| * | | refactor release_to_elasticsearch transform | Bryan Newbold | 2020-12-16 | 1 | -131/+148 | |
|/ / | | | | | | | | | | | | | | | | | | | | | | | This method was huge an monolithic. This commit splits out the content and container specific sections into helper functions to make it more managable. This involved refactoring to make many flags ("is_*" and "in_*") part of the output dict through the entire code path, allowing simple update() calls on the dict. Noting that in the future should refactor to use a type-annotated class for the elasticsearch output object. Perhaps something auto-generated from the ES schema itself (JSON files). | |||||
* | | html ingest: small fixes to try_update() code path | Bryan Newbold | 2020-12-15 | 1 | -5/+5 | |
| | | | | | | | | | | Don't currently have test coverage for most try_update() code; run the inserts manually in testing. | |||||
* | | notes on partial-progress DOAJ release metadata import | Bryan Newbold | 2020-12-14 | 1 | -0/+105 | |
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* | | bulk import notes on ORCID | Bryan Newbold | 2020-12-14 | 1 | -0/+55 | |
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* | | Revert "gitlab CI: explicitly use xenial tag of image" | Bryan Newbold | 2020-12-11 | 1 | -1/+1 | |
| | | | | | | | | This reverts commit dbfc6e9bacaab4960e814192d66eefea87ef8930. | |||||
* | | Revert "docker xenial base image: include python3.8" | Bryan Newbold | 2020-12-11 | 1 | -6/+1 | |
| | | | | | | | | This reverts commit 91628426678a635f26cf992dbd5caedb4a3ae24b. |