Commit message (Collapse) | Author | Age | Files | Lines | |
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* | Merge branch 'martin-pubmed-eof-sentry-91102' into 'master' | Martin Czygan | 2021-07-16 | 1 | -4/+30 |
|\ | | | | | | | | | pubmed: reconnect on error See merge request webgroup/fatcat!110 | ||||
| * | pubmed: reconnect on error | Martin Czygan | 2021-07-16 | 1 | -4/+30 |
|/ | | | | | | | | | ftp retrieval would run but fail with EOFError on /pubmed/updatefiles/pubmed21n1328_stats.html - not able to find the root cause; using a fresh client, the exact same file would work just fine. So when we retry, we reconnect on failure. Refs: sentry #91102. | ||||
* | CHANGELOG updates (unreleased) | Bryan Newbold | 2021-07-13 | 1 | -0/+7 |
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* | web: fix flask/werkzeug encoding for mediawiki oauth | Bryan Newbold | 2021-07-13 | 1 | -1/+4 |
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* | web: fix missing ext_ids default for deleted entity view | Bryan Newbold | 2021-07-13 | 1 | -1/+1 |
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* | web: fix 'file' entity edit form links | Bryan Newbold | 2021-07-02 | 1 | -1/+1 |
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* | web: missing trailing parens | Bryan Newbold | 2021-07-02 | 1 | -1/+1 |
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* | web: PMCID external link improvement | Bryan Newbold | 2021-07-02 | 2 | -2/+2 |
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* | Merge branch 'bnewbold-more-doi-lower' into 'master' | Martin Czygan | 2021-07-02 | 3 | -3/+8 |
|\ | | | | | | | | | more consistent and defensive lower-casing of DOIs See merge request webgroup/fatcat!109 | ||||
| * | more consistent and defensive lower-casing of DOIs | Bryan Newbold | 2021-06-23 | 3 | -3/+8 |
| | | | | | | | | | | | | | | After noticing more upper/lower ambiguity in production. In particular, we have some old ingest requests in sandcrawler DB, which get re-submitted/re-tried, which have capitalized DOIs in the link source id field. | ||||
* | | tests: small citeproc style changes (to match Pipfile.lock update) | Bryan Newbold | 2021-06-23 | 2 | -3/+4 |
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* | | pipenv: regenerate lock file | Bryan Newbold | 2021-06-23 | 1 | -26/+68 |
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* | | pipenv: add pydantic; add surt; narrow dynaconf | Bryan Newbold | 2021-06-23 | 1 | -1/+3 |
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* | | old dblp hacking notes | Bryan Newbold | 2021-06-23 | 1 | -0/+72 |
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* | stats snapshot (2021-06-23) | Bryan Newbold | 2021-06-23 | 2 | -0/+47 |
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* | SQL dumps: more pigz (vs. gzip) for speed | Bryan Newbold | 2021-06-17 | 1 | -2/+2 |
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* | fatcat_ref ES schema: more doc_values; source_year not source_release_year | Bryan Newbold | 2021-06-17 | 1 | -5/+2 |
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* | Merge branch 'martin-datacite-none-title-sentry-88350' into 'master' | Martin Czygan | 2021-06-11 | 4 | -2/+97 |
|\ | | | | | | | | | datacite: more careful title string access; fixes sentry #88350 See merge request webgroup/fatcat!108 | ||||
| * | datacite: more careful title string access; fixes sentry #88350 | Martin Czygan | 2021-06-11 | 4 | -2/+97 |
|/ | | | | | Caused by a partial "title entry without title" coming *first* (e.g. just holding, e.g. a language, like: {'lang': 'da'} | ||||
* | Merge branch 'bnewbold-clean-doi-lower' into 'master' | Martin Czygan | 2021-06-10 | 1 | -1/+4 |
|\ | | | | | | | | | clean_doi() should lower-case returned DOI See merge request webgroup/fatcat!107 | ||||
| * | clean_doi() should lower-case returned DOI | Bryan Newbold | 2021-06-07 | 1 | -1/+4 |
|/ | | | | | | | | | | Code in a number of places (including Pubmed importer) assumed that this was already lower-casing DOIs, resulting in some broken metadata getting created. See also: https://github.com/internetarchive/fatcat/issues/83 This is just the first step of mitigation. | ||||
* | web: fix DOAJ article links (remove trailing slash) | Bryan Newbold | 2021-06-04 | 1 | -1/+1 |
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* | dblp tests: skip redundant seek(0) | Bryan Newbold | 2021-06-03 | 1 | -6/+1 |
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* | ingest: swap ingest and file checks, to result in clearer stats/counts of ↵ | Bryan Newbold | 2021-06-03 | 1 | -2/+2 |
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* | ingest: don't accept mag and s2 URLs | Bryan Newbold | 2021-06-03 | 1 | -4/+4 |
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* | update dblp pre-import notes and pipenv python version (3.8) | Bryan Newbold | 2021-06-03 | 2 | -6/+11 |
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* | dblp import notes and bulk edit CHANGELOG update | Bryan Newbold | 2021-06-03 | 2 | -1/+47 |
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* | DOAJ bulk import notes, and update bulk edit changelog | Bryan Newbold | 2021-06-02 | 2 | -0/+89 |
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* | bump fuzzycat dependency to 0.1.21 | Bryan Newbold | 2021-06-02 | 2 | -20/+18 |
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* | web: fix spacing for doaj/dblp identifiers in SERP | Bryan Newbold | 2021-05-31 | 1 | -1/+1 |
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* | ingest: don't 'track_total_hits' for ES 7.x count() | Bryan Newbold | 2021-05-31 | 1 | -1/+1 |
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* | web: bugfix dblp vs. doaj display logic | Bryan Newbold | 2021-05-31 | 1 | -1/+1 |
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* | update fuzzycat to 0.1.20 | Bryan Newbold | 2021-05-31 | 2 | -31/+94 |
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* | Merge branch 'bnewbold-lint-fixes' into 'master' | Martin Czygan | 2021-05-28 | 7 | -9/+8 |
|\ | | | | | | | | | various lint fixes; should un-break CI See merge request webgroup/fatcat!106 | ||||
| * | makefile: add pylint -E invocation to 'make lint', to match CI | Bryan Newbold | 2021-05-25 | 1 | -0/+1 |
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| * | skip pylint on 'assigning-non-slot' warnings in Flask 2.0 | Bryan Newbold | 2021-05-25 | 1 | -2/+2 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | The 'permanent' field is still valid to set to a boolean in Flask 2.0; not sure why pylint is unhappy in CI (causing test failures). Don't see any problem running test suite locally. Flask API docs: https://flask.palletsprojects.com/en/2.0.x/api/?highlight=permanent#flask.session.permanent And code (recent master branch): https://github.com/pallets/flask/blob/4240ace59710d86c478111affd4ad6fb4c8cad9e/src/flask/sessions.py#L20 | ||||
| * | changelog worker: fix file/fileset typo, caught by lint | Bryan Newbold | 2021-05-25 | 1 | -1/+1 |
| | | | | | | | | | | This would have been resulting in some releases not getting re-indexed into search. | ||||
| * | small python lint fixes (no behavior change) | Bryan Newbold | 2021-05-25 | 5 | -6/+4 |
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* | update CHANGELOG regarding python dependencies; call it v0.3.4v0.3.4 | Bryan Newbold | 2021-05-25 | 1 | -1/+4 |
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* | Merge branch 'bnewbold-pallets-updates' into 'master' | Martin Czygan | 2021-05-25 | 2 | -152/+167 |
|\ | | | | | | | | | bump Flask to 2.x; other deps upgraded automatically See merge request webgroup/fatcat!105 | ||||
| * | bump Flask to 2.x; other deps upgraded automatically | Bryan Newbold | 2021-05-21 | 2 | -152/+167 |
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* | ingest: add per-container ingest type overrides | Bryan Newbold | 2021-05-21 | 2 | -1/+23 |
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* | fix arabesque sqlite3 examples to have 14-digit timestamps | Bryan Newbold | 2021-05-21 | 1 | -0/+0 |
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* | arabesque importer: ensure full 14-digit timestamps | Bryan Newbold | 2021-05-21 | 1 | -1/+3 |
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* | Andrew W. Mellon Foundation | Bryan Newbold | 2021-05-18 | 2 | -3/+3 |
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* | more interesting example entities (eg, to crawl) | Bryan Newbold | 2021-05-18 | 1 | -0/+19 |
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* | elasticsearch ref schema: 6 shards, not 12 | Bryan Newbold | 2021-05-18 | 1 | -1/+1 |
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* | Merge branch 'bnewbold-pipenv-cleanup' into 'master' | bnewbold | 2021-04-23 | 2 | -327/+277 |
|\ | | | | | | | | | pipenv cleanup See merge request webgroup/fatcat!104 | ||||
| * | pipenv: re-lock project | Bryan Newbold | 2021-04-19 | 1 | -301/+253 |
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| * | pipenv: constrain most package versions to at least major | Bryan Newbold | 2021-04-19 | 1 | -24/+24 |
| | | | | | | | | | | | | | | | | | | Don't have a complete policy with this change, just locking things down a bit more so small package additions and updates don't end up upgrading some small dependency to a major new backwards-incompatible version. Also, correct bs4 -> beautifulsoup4 (bs4 is the import name, not the package name) |