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-rw-r--r--tests/api.py308
-rw-r--r--tests/api_client.py14
-rw-r--r--tests/entity_lifecycle.py80
-rw-r--r--tests/files/crossref-works.2018-01-21.badsample.json10
-rw-r--r--tests/fixtures.py169
-rw-r--r--tests/models.py87
-rw-r--r--tests/routes.py67
-rw-r--r--tests/test_fixtures.py29
8 files changed, 0 insertions, 764 deletions
diff --git a/tests/api.py b/tests/api.py
deleted file mode 100644
index 02875f64..00000000
--- a/tests/api.py
+++ /dev/null
@@ -1,308 +0,0 @@
-
-import json
-import unittest
-import tempfile
-import pytest
-import fatcat
-import fatcat.sql
-from fatcat.models import *
-from fixtures import *
-
-
-def test_health(app):
- rv = app.get('/health')
- obj = json.loads(rv.data.decode('utf-8'))
- assert obj['ok']
-
-def test_api_work(app):
- fatcat.dummy.insert_example_works()
-
- # Invalid Id
- rv = app.get('/v0/work/_')
- assert rv.status_code == 404
-
- # Random
- rv = app.get('/v0/work/random')
- rv = app.get(rv.location)
- work = json.loads(rv.data.decode('utf-8'))
- check_entity_fields(work)
- print(work)
- assert work['title']
- assert work['work_type']
-
- # Valid Id (from random above)
- rv = app.get('/v0/work/{}'.format(work['id']))
- assert rv.status_code == 200
-
- # Missing Id
- rv = app.get('/v0/work/r3zga5b9cd7ef8gh084714iljk')
- assert rv.status_code == 404
-
-def test_api_work_create(app):
- assert WorkIdent.query.count() == 0
- assert WorkRev.query.count() == 0
- assert WorkEdit.query.count() == 0
- rv = app.post('/v0/work',
- data=json.dumps(dict(title="dummy", work_type="thing", extra=dict(a=1, b="zing"))),
- headers={"content-type": "application/json"})
- print(rv)
- assert rv.status_code == 200
- assert WorkIdent.query.count() == 1
- assert WorkRev.query.count() == 1
- assert WorkEdit.query.count() == 1
- # not alive yet
- assert WorkIdent.query.filter(WorkIdent.is_live==True).count() == 0
-
-def test_api_rich_create(app):
-
- # TODO: create user?
-
- rv = app.post('/v0/editgroup',
- data=json.dumps(dict(
- extra=dict(q=1, u="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- editgroup_id = obj['id']
-
- for cls in (WorkIdent, WorkRev, WorkEdit,
- ContainerIdent, ContainerRev, ContainerEdit,
- CreatorIdent, CreatorRev, CreatorEdit,
- ReleaseIdent, ReleaseRev, ReleaseEdit,
- FileIdent, FileRev, FileEdit,
- ChangelogEntry):
- assert cls.query.count() == 0
-
- rv = app.post('/v0/container',
- data=json.dumps(dict(
- name="schmournal",
- publisher="society of authors",
- issn="2222-3333",
- editgroup=editgroup_id,
- extra=dict(a=2, i="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- container_id = obj['id']
-
- rv = app.post('/v0/creator',
- data=json.dumps(dict(
- name="anon y. mouse",
- orcid="0000-0002-1825-0097",
- editgroup=editgroup_id,
- extra=dict(w=1, q="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- creator_id = obj['id']
-
- rv = app.post('/v0/work',
- data=json.dumps(dict(
- title="dummy work",
- work_type="book",
- editgroup=editgroup_id,
- extra=dict(a=3, b="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- work_id = obj['id']
-
- # this stub work will be referenced
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="derivative work",
- work_type="journal-article",
- work=work_id,
- creators=[creator_id],
- doi="10.1234/58",
- editgroup=editgroup_id,
- refs=[
- dict(stub="some other journal article"),
- ],
- extra=dict(f=7, b="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- stub_release_id = obj['id']
-
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="dummy work",
- work_type="book",
- work=work_id,
- container=container_id,
- creators=[creator_id],
- doi="10.1234/5678",
- editgroup=editgroup_id,
- refs=[
- dict(stub="some book", target=stub_release_id),
- ],
- extra=dict(f=7, b="loopy"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- release_id = obj['id']
-
- rv = app.post('/v0/file',
- data=json.dumps(dict(
- sha1="deadbeefdeadbeef",
- size=1234,
- releases=[release_id],
- editgroup=editgroup_id,
- extra=dict(f=4, b="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- file_id = obj['id']
-
- for cls in (WorkIdent, WorkRev, WorkEdit,
- ContainerIdent, ContainerRev, ContainerEdit,
- CreatorIdent, CreatorRev, CreatorEdit,
- FileIdent, FileRev, FileEdit):
- assert cls.query.count() == 1
- for cls in (ReleaseIdent, ReleaseRev, ReleaseEdit):
- assert cls.query.count() == 2
-
- for cls in (WorkIdent,
- ContainerIdent,
- CreatorIdent,
- ReleaseIdent,
- FileIdent):
- assert cls.query.filter(cls.is_live==True).count() == 0
-
- assert ChangelogEntry.query.count() == 0
- rv = app.post('/v0/editgroup/{}/accept'.format(editgroup_id),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- assert ChangelogEntry.query.count() == 1
-
- for cls in (WorkIdent, WorkRev, WorkEdit,
- ContainerIdent, ContainerRev, ContainerEdit,
- CreatorIdent, CreatorRev, CreatorEdit,
- FileIdent, FileRev, FileEdit):
- assert cls.query.count() == 1
- for cls in (ReleaseIdent, ReleaseRev, ReleaseEdit):
- assert cls.query.count() == 2
-
- for cls in (WorkIdent,
- ContainerIdent,
- CreatorIdent,
- FileIdent):
- assert cls.query.filter(cls.is_live==True).count() == 1
- assert ReleaseIdent.query.filter(ReleaseIdent.is_live==True).count() == 2
-
- # Test that foreign key relations worked
- release_rv = json.loads(app.get('/v0/release/{}'.format(release_id)).data.decode('utf-8'))
- print(release_rv)
- assert release_rv['creators'][0]['creator'] == creator_id
- assert release_rv['container']['id'] == container_id
- assert release_rv['work']['id'] == work_id
- assert release_rv['refs'][0]['target'] == stub_release_id
-
- file_rv = json.loads(app.get('/v0/file/{}'.format(file_id)).data.decode('utf-8'))
- print(file_rv)
- assert file_rv['releases'][0]['release'] == release_id
-
- # test that editor's active edit group is now invalid
- editor = Editor.query.first()
- assert editor.active_editgroup is None
-
-def test_api_release_lookup(rich_app):
- app = rich_app
-
- rv = app.get('/v0/release/1',
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
-
- rv = app.get('/v0/release/lookup',
- data=json.dumps(dict(doi="10.1234/5678")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- assert obj['doi'] == "10.1234/5678"
- assert obj.get('id') != None
-
- rv = app.get('/v0/release/lookup',
- data=json.dumps(dict(doi="10.1234/5678_noexit")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 404
-
- rv = app.get('/v0/release/lookup',
- data=json.dumps(dict(doi="not_even_valid_doi")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 400
-
-def test_api_creator_lookup(rich_app):
- app = rich_app
-
- rv = app.get('/v0/creator/1',
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
-
- rv = app.get('/v0/creator/lookup',
- data=json.dumps(dict(orcid="0000-0002-1825-0097")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- assert obj['orcid'] == "0000-0002-1825-0097"
- assert obj.get('id') != None
-
- rv = app.get('/v0/creator/lookup',
- data=json.dumps(dict(orcid="0000-0002-1825-0098")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 404
-
- rv = app.get('/v0/creator/lookup',
- data=json.dumps(dict(orcid="not_even_valid_orcid")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 400
-
-
-def test_api_container_lookup(rich_app):
- app = rich_app
-
- rv = app.get('/v0/container/1',
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
-
- rv = app.get('/v0/container/lookup',
- data=json.dumps(dict(issn="2222-3333")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- assert obj['issn'] == "2222-3333"
- assert obj.get('id') != None
-
- rv = app.get('/v0/container/lookup',
- data=json.dumps(dict(issn="2222-3334")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 404
-
- rv = app.get('/v0/container/lookup',
- data=json.dumps(dict(issn="not_even_valid_issn")),
- headers={"content-type": "application/json"})
- assert rv.status_code == 400
-
-def test_api_editor_get(rich_app):
- app = rich_app
-
- rv = app.get('/v0/editor/admin',
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- print(obj)
- assert obj['username'] == "admin"
- assert obj['id'] == 1
-
-def test_api_editor_changelog(rich_app):
- app = rich_app
-
- rv = app.get('/v0/editor/admin/changelog',
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- print(obj)
- assert len(obj) == 1
diff --git a/tests/api_client.py b/tests/api_client.py
deleted file mode 100644
index 37e3da56..00000000
--- a/tests/api_client.py
+++ /dev/null
@@ -1,14 +0,0 @@
-
-import pytest
-import fatcat.api_client
-from fixtures import *
-
-
-def test_client_health(api_client):
- assert api_client.health() != None
-
-
-def test_import_crossref(api_client):
- api_client.import_crossref_file('tests/files/crossref-works.2018-01-21.badsample.json')
-
- # TODO: use API to check that entities actually created...
diff --git a/tests/entity_lifecycle.py b/tests/entity_lifecycle.py
deleted file mode 100644
index 4ac7ee68..00000000
--- a/tests/entity_lifecycle.py
+++ /dev/null
@@ -1,80 +0,0 @@
-
-import json
-import unittest
-import tempfile
-import pytest
-import fatcat
-import fatcat.sql
-from fatcat.models import *
-from fixtures import *
-
-
-def test_merge_works(app):
-
- # two works, each with releases
- rv = app.post('/v0/work',
- data=json.dumps(dict()),
- headers={"content-type": "application/json"})
- workA_id = json.loads(rv.data.decode('utf-8'))['id']
-
- rv = app.post('/v0/work',
- data=json.dumps(dict()),
- headers={"content-type": "application/json"})
- workB_id = json.loads(rv.data.decode('utf-8'))['id']
-
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="some release",
- work_type="journal-article",
- work=workA_id,
- doi="10.1234/A1")),
- headers={"content-type": "application/json"})
- releaseA1 = json.loads(rv.data.decode('utf-8'))['id']
-
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="some release",
- work_type="journal-article",
- work=workB_id,
- doi="10.1234/B1")),
- headers={"content-type": "application/json"})
- releaseB1 = json.loads(rv.data.decode('utf-8'))['id']
-
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="some release",
- work_type="journal-article",
- work=workB_id,
- doi="10.1234/A1")),
- headers={"content-type": "application/json"})
- releaseB2 = json.loads(rv.data.decode('utf-8'))['id']
-
- # XXX: what if workB primary was set?
-
- editgroup_id = 1
- rv = app.post('/v0/editgroup/{}/accept'.format(editgroup_id),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- assert ChangelogEntry.query.count() == 1
- assert WorkIdent.query.filter(WorkIdent.is_live==True).count() == 2
- assert ReleaseIdent.query.filter(ReleaseIdent.is_live==True).count() == 3
-
- # merge works
- fatcat.sql.merge_works(workA_id, workB_id)
- editgroup_id = 2
- rv = app.post('/v0/editgroup/{}/accept'.format(editgroup_id),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
-
- # check results
- assert ChangelogEntry.query.count() == 2
- assert WorkIdent.query.filter(WorkIdent.is_live==True).count() == 2
- assert ReleaseIdent.query.filter(ReleaseIdent.is_live==True).count() == 3
-
- workA_json = json.loads(app.get('/v0/work/{}'.format(workA_id)).data.decode('utf-8'))
- workB_json = json.loads(app.get('/v0/work/{}'.format(workB_id)).data.decode('utf-8'))
- assert workA_json['rev'] == workB_json['rev']
- print(workA_json)
- print(workB_json)
- assert workA_json['redirect_id'] == None
- assert workB_json['redirect_id'] == workA_json['id']
diff --git a/tests/files/crossref-works.2018-01-21.badsample.json b/tests/files/crossref-works.2018-01-21.badsample.json
deleted file mode 100644
index 143adf3e..00000000
--- a/tests/files/crossref-works.2018-01-21.badsample.json
+++ /dev/null
@@ -1,10 +0,0 @@
-{ "_id" : { "$oid" : "5a55183088a035a45bd906de" }, "indexed" : { "date-parts" : [ [ 2017, 10, 23 ] ], "date-time" : "2017-10-23T14:35:29Z", "timestamp" : { "$numberLong" : "1508769329541" } }, "reference-count" : 7, "publisher" : "Elsevier BV", "issue" : "3", "license" : [ { "URL" : "http://www.elsevier.com/tdm/userlicense/1.0/", "start" : { "date-parts" : [ [ 2002, 3, 1 ] ], "date-time" : "2002-03-01T00:00:00Z", "timestamp" : { "$numberLong" : "1014940800000" } }, "delay-in-days" : 0, "content-version" : "tdm" } ], "content-domain" : { "domain" : [], "crossmark-restriction" : false }, "short-container-title" : [ "Journal of the American Academy of Dermatology" ], "published-print" : { "date-parts" : [ [ 2002, 3 ] ] }, "DOI" : "10.1067/mjd.2002.110660", "type" : "journal-article", "created" : { "date-parts" : [ [ 2002, 8, 24 ] ], "date-time" : "2002-08-24T22:14:26Z", "timestamp" : { "$numberLong" : "1030227266000" } }, "page" : "434-436", "source" : "Crossref", "is-referenced-by-count" : 7, "title" : [ "Progressive generalized alopecia due to systemic amyloidosis" ], "prefix" : "10.1067", "volume" : "46", "author" : [ { "given" : "Michael E.", "family" : "Lutz", "affiliation" : [] }, { "given" : "Mark R.", "family" : "Pittelkow", "affiliation" : [] } ], "member" : "78", "container-title" : [ "Journal of the American Academy of Dermatology" ], "link" : [ { "URL" : "http://api.elsevier.com/content/article/PII:S0190962202365551?httpAccept=text/xml", "content-type" : "text/xml", "content-version" : "vor", "intended-application" : "text-mining" }, { "URL" : "http://api.elsevier.com/content/article/PII:S0190962202365551?httpAccept=text/plain", "content-type" : "text/plain", "content-version" : "vor", "intended-application" : "text-mining" } ], "deposited" : { "date-parts" : [ [ 2017, 6, 14 ] ], "date-time" : "2017-06-14T16:37:31Z", "timestamp" : { "$numberLong" : "1497458251000" } }, "score" : 1, "issued" : { "date-parts" : [ [ 2002, 3 ] ] }, "references-count" : 7, "alternative-id" : [ "S0190962202365551" ], "URL" : "http://dx.doi.org/10.1067/mjd.2002.110660", "ISSN" : [ "0190-9622" ], "issn-type" : [ { "value" : "0190-9622", "type" : "print" } ], "subject" : [ "Dermatology" ] }
-{ "_id" : { "$oid" : "5a5513fb88a035a45bd63d2e" }, "indexed" : { "date-parts" : [ [ 2017, 10, 23 ] ], "date-time" : "2017-10-23T14:15:17Z", "timestamp" : { "$numberLong" : "1508768117199" } }, "reference-count" : 25, "publisher" : "Wiley-Blackwell", "issue" : "4", "license" : [ { "URL" : "http://doi.wiley.com/10.1002/tdm_license_1.1", "start" : { "date-parts" : [ [ 2015, 9, 1 ] ], "date-time" : "2015-09-01T00:00:00Z", "timestamp" : { "$numberLong" : "1441065600000" } }, "delay-in-days" : 6452, "content-version" : "tdm" } ], "content-domain" : { "domain" : [], "crossmark-restriction" : false }, "short-container-title" : [ "Int. J. Quant. Chem." ], "published-print" : { "date-parts" : [ [ 1998 ] ] }, "DOI" : "10.1002/(sici)1097-461x(1998)66:4<261::aid-qua1>3.0.co;2-t", "type" : "journal-article", "created" : { "date-parts" : [ [ 2002, 8, 25 ] ], "date-time" : "2002-08-25T21:09:51Z", "timestamp" : { "$numberLong" : "1030309791000" } }, "page" : "261-272", "source" : "Crossref", "is-referenced-by-count" : 5, "title" : [ "Renormalized perturbation theory by the moment method for degenerate states: Anharmonic oscillators" ], "prefix" : "10.1002", "volume" : "66", "author" : [ { "given" : "Marcelo D.", "family" : "Radicioni", "affiliation" : [] }, { "given" : "Carlos G.", "family" : "Diaz", "affiliation" : [] }, { "given" : "Francisco M.", "family" : "Fern�ndez", "affiliation" : [] } ], "member" : "311", "reference" : [ { "key" : "10.1002/(SICI)1097-461X(1998)66:4<261::AID-QUA1>3.0.CO;2-T-BIB1", "author" : "Swenson", "volume" : "57", "first-page" : "1734", "year" : "1972", "journal-title" : "J. Chem. Phys.", "DOI" : "10.1063/1.1678462", "doi-asserted-by" : "crossref" }, { "key" : "10.1002/(SICI)1097-461X(1998)66:4<261::AID-QUA1>3.0.CO;2-T-BIB2", "author" : "Killingbeck", "volume" : "65", "first-page" : "87", "year" : "1978", "journal-title" : "Phys. Lett. A", "DOI" : "10.1016/0375-9601(78)90580-7", "doi-asserted-by" : "crossref" }, { "key" : "10.1002/(SICI)1097-461X(1998)66:4<261::AID-QUA1>3.0.CO;2-T-BIB3", "author" : "Fernández", "volume" : "43", "year" : "1987", "unstructured" : "and Hypervirial Theorems, Lecture Notes in Chemistry, Vol. 43, (Springer, Berlin, 1987).", "volume-title" : "Hypervirial Theorems, Lecture Notes in Chemistry", "DOI" : "10.1007/978-3-642-93349-3", "doi-asserted-by" : "crossref" }, { "key" : "10.1002/(SICI)1097-461X(1998)66:4<261::AID-QUA1>3.0.CO;2-T-BIB4", "author" : "Arteca", "volume" : "53", "year" : "1990", "unstructured" : "and Large Order Perturbation Theory and Summation Methods in Quantum Mechanics, Lecture Notes in Chemistry, Vol. 53, (Springer, Berlin, 1990).", "volume-title" : "Large Order Perturbation Theory and Summation Methods in Quantum Mechanics, Lecture Notes in Chemistry", "DOI" : "10.1007/978-3-642-93469-8", "doi-asserted-by" : "crossref" }, { "key" : "10.1002/(SICI)1097-461X(1998)66:4<261::AID-QUA1>3.0.CO;2-T-BIB5", "author" : "Ader", "volume" : "97", "first-page" : "178", "year" : "1983", "journal-title" : "Phys. 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Washington, D.C., United State Department of Health, Education and Welfare, Public Health Service (NIC Carcinogenesis Technical Report Series No. 83; DHEW Publication No (NIH 78-1333)." }, { "key" : "BIB20", "author" : "Rogers", "volume" : "89", "first-page" : "321", "year" : "1981", "journal-title" : "Mutat Res", "DOI" : "10.1016/0165-1218(81)90113-0", "doi-asserted-by" : "crossref" }, { "key" : "BIB21", "author" : "Rosenberg", "year" : "1995", "unstructured" : "1995. The best laid bans: the impact of pesticide bans on workers. 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Integrated Risk Information System (IRIS). Oxamyl. December 9." }, { "key" : "BIB29", "author" : "U.S. Environmental Protection Agency", "year" : "1986", "unstructured" : "U.S. Environmental Protection Agency. 1986. Chemical Fact Sheet Number 26: Daminozide. Office of Pesticides and Toxic Substances, Washington, DC. 10-169." }, { "key" : "BIB30", "author" : "U.S. Environmental Protection Agency", "year" : "1989", "unstructured" : "U.S. Environmental Protection Agency, Office of Pesticide Programs, Office of Pesticides and Toxic Substances. 1989. Daminozide special review technical support document: Preliminary determination to cancel the food uses of Daminozide. Washington, DC: May." }, { "key" : "BIB31", "author" : "U.S. Environmental Protection Agency", "volume" : "54", "first-page" : "10", "year" : "1989", "journal-title" : "Fed Regist." }, { "key" : "BIB32", "author" : "U.S. Environmental Protection Agency", "year" : "1990", "unstructured" : "U.S. Environmental Protection Agency. 1990. Integrated Risk Information System (IRIS). Propargite. May 1." }, { "key" : "BIB33", "author" : "U.S. Environmental Protection Agency", "volume" : "57", "first-page" : "10", "year" : "1992", "journal-title" : "Fed. Regist." }, { "key" : "BIB34", "author" : "U.S. Environmental Protection Agency", "year" : "1993", "unstructured" : "U.S. Environmental Protection Agency, Office of Prevention, Pesticides and Toxic Substances. 1993. R.E.D. Facts, Document number EPA-738-F-93-007. September." }, { "key" : "BIB35", "author" : "U.S. Department of Agriculture", "year" : "1993", "journal-title" : "New England Agricultural Statistics" }, { "key" : "BIB36", "author" : "Warren", "year" : "1992", "unstructured" : "1992. Unanticipated consequences of banning a chemical: the case of Alar. Unpublished manuscript, Department of Work Environment, University of Massachusetts Lowell." }, { "key" : "BIB37", "author" : "Wood", "year" : "1990", "unstructured" : "1990. Memo to Poverty Lane, West Lebanon, New Hampshire, to members of the Risk Assessment/Risk Management Work Group, Keystone National Policy Dialogue on Food Safety, Oct. 26, 1990, cited in Rosenberg, B. 1996." } ], "container-title" : [ "American Journal of Industrial Medicine" ], "link" : [ { "URL" : "https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2F1097-0274(200102)39:2%3C218::AID-AJIM1009%3E3.0.CO;2-4", "content-type" : "unspecified", "content-version" : "vor", "intended-application" : "text-mining" } ], "deposited" : { "date-parts" : [ [ 2017, 8, 4 ] ], "date-time" : "2017-08-04T20:22:16Z", "timestamp" : { "$numberLong" : "1501878136000" } }, "score" : 1, "issued" : { "date-parts" : [ [ 2001 ] ] }, "references-count" : 37, "URL" : "http://dx.doi.org/10.1002/1097-0274(200102)39:2<218::aid-ajim1009>3.0.co;2-4", "relation" : { "cites" : [] }, "ISSN" : [ "0271-3586", "1097-0274" ], "issn-type" : [ { "value" : "0271-3586", "type" : "print" }, { "value" : "1097-0274", "type" : "electronic" } ], "subject" : [ "Public Health, Environmental and Occupational Health" ] }
diff --git a/tests/fixtures.py b/tests/fixtures.py
deleted file mode 100644
index d3d8c24b..00000000
--- a/tests/fixtures.py
+++ /dev/null
@@ -1,169 +0,0 @@
-
-import os
-import time
-import json
-import signal
-import pytest
-import fatcat
-import fatcat.sql
-from fatcat.models import *
-
-
-@pytest.fixture
-def full_app():
- fatcat.app.config['SQLALCHEMY_DATABASE_URI'] = 'sqlite://'
- fatcat.app.testing = True
- fatcat.app.debug = False
- fatcat.db.session.remove()
- fatcat.db.drop_all()
- fatcat.db.create_all()
- fatcat.sql.populate_db()
- return fatcat.app
-
-@pytest.fixture
-def app(full_app):
- return full_app.test_client()
-
-@pytest.fixture
-def rich_app(app):
- enrichen_test_app(app)
- return app
-
-
-@pytest.fixture(scope="function")
-def api_client(full_app):
-
- pid = os.fork()
- if pid == 0:
- full_app.testing = False
- full_app.run(host="localhost", port=8444, debug=False)
- os._exit(0)
-
- time.sleep(0.2)
- yield fatcat.api_client.FatCatApiClient("http://localhost:8444")
- os.kill(pid, signal.SIGKILL)
-
-
-## Helpers ##################################################################
-
-def enrichen_test_app(app):
-
- rv = app.post('/v0/editgroup',
- data=json.dumps(dict(
- extra=dict(q=1, u="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- editgroup_id = obj['id']
-
- rv = app.post('/v0/container',
- data=json.dumps(dict(
- name="schmournal",
- publisher="society of authors",
- issn="2222-3333",
- editgroup=editgroup_id,
- extra=dict(a=2, i="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- container_id = obj['id']
-
- rv = app.post('/v0/creator',
- data=json.dumps(dict(
- name="anon y. mouse",
- orcid="0000-0002-1825-0097",
- editgroup=editgroup_id,
- extra=dict(w=1, q="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- creator_id = obj['id']
-
- rv = app.post('/v0/work',
- data=json.dumps(dict(
- title="dummy work",
- work_type="book",
- editgroup=editgroup_id,
- extra=dict(a=3, b="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- work_id = obj['id']
-
- # this stub work will be referenced
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="derivative work",
- work_type="journal-article",
- work=work_id,
- creators=[creator_id],
- doi="10.1234/58",
- editgroup=editgroup_id,
- refs=[
- dict(stub="some other journal article"),
- ],
- extra=dict(f=7, b="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- stub_release_id = obj['id']
-
- rv = app.post('/v0/release',
- data=json.dumps(dict(
- title="dummy work",
- work_type="book",
- work=work_id,
- container=container_id,
- creators=[creator_id],
- doi="10.1234/5678",
- editgroup=editgroup_id,
- refs=[
- dict(stub="some book", target=stub_release_id),
- ],
- extra=dict(f=7, b="loopy"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- release_id = obj['id']
-
- rv = app.post('/v0/file',
- data=json.dumps(dict(
- sha1="deadbeefdeadbeef",
- size=1234,
- releases=[release_id],
- editgroup=editgroup_id,
- extra=dict(f=4, b="zing"))),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
- obj = json.loads(rv.data.decode('utf-8'))
- file_id = obj['id']
-
- rv = app.post('/v0/editgroup/{}/accept'.format(editgroup_id),
- headers={"content-type": "application/json"})
- assert rv.status_code == 200
-
-def check_entity_fields(e):
- for key in ('rev', 'is_live', 'redirect_id'):
- assert key in e
- for key in ('id',):
- assert e[key] is not None
-
-def check_release(e):
- for key in ('work', 'release_type'):
- assert key in e
- for key in ('title', ):
- assert e[key] is not None
- for key in ('refs', 'creators'):
- assert type(e[key]) == list
-
-def check_creator(e):
- for key in ('name',):
- assert e[key] is not None
-
-def check_container(e):
- for key in ('name',):
- assert e[key] is not None
-
-def check_file(e):
- for key in ('size', 'sha1'):
- assert e[key] is not None
diff --git a/tests/models.py b/tests/models.py
deleted file mode 100644
index 98bb6bc7..00000000
--- a/tests/models.py
+++ /dev/null
@@ -1,87 +0,0 @@
-
-import json
-import unittest
-import tempfile
-import pytest
-import fatcat
-import fatcat.sql
-from fatcat.models import *
-from fixtures import *
-
-
-def test_example_works(app):
- fatcat.dummy.insert_example_works()
-
-def test_random_works(app):
- fatcat.dummy.insert_random_works()
-
-def test_load_crossref(app):
- with open('./tests/files/crossref-works.2018-01-21.badsample.json', 'r') as f:
- raw = [json.loads(l) for l in f.readlines() if len(l) > 3]
- for obj in raw:
- fatcat.sql.add_crossref_via_model(obj)
-
-def test_schema_release_rev(app):
- assert ReleaseRev.query.count() == 0
- e = {
- "title": "Bogus title",
- "release_type": "book",
- "creators": [],
- "refs": [],
- }
- model = release_rev_schema.load(e)
- fatcat.db.session.add(model.data)
- fatcat.db.session.commit()
- assert ReleaseRev.query.count() == 1
- model_after = ReleaseRev.query.first()
- serial = release_rev_schema.dump(model_after).data
- #check_release(serial)
- for k in e:
- assert e[k] == serial[k]
-
-def test_schema_creator_rev(app):
- assert ReleaseRev.query.count() == 0
- e = {
- "name": "Robin (Batman)",
- }
- model = creator_rev_schema.load(e)
- fatcat.db.session.add(model.data)
- fatcat.db.session.commit()
- assert CreatorRev.query.count() == 1
- model_after = CreatorRev.query.first()
- serial = creator_rev_schema.dump(model_after).data
- check_creator(serial)
- for k in e.keys():
- assert e[k] == serial[k]
-
-def test_schema_container_rev(app):
- assert ReleaseRev.query.count() == 0
- e = {
- "name": "Papers Monthly",
- }
- model = container_rev_schema.load(e)
- fatcat.db.session.add(model.data)
- fatcat.db.session.commit()
- assert ContainerRev.query.count() == 1
- model_after = ContainerRev.query.first()
- serial = container_rev_schema.dump(model_after).data
- check_container(serial)
- for k in e.keys():
- assert e[k] == serial[k]
-
-def test_schema_file_rev(app):
- assert ReleaseRev.query.count() == 0
- e = {
- "sha1": "asdf",
- "size": 6,
- }
- model = file_rev_schema.load(e)
- print(model)
- fatcat.db.session.add(model.data)
- fatcat.db.session.commit()
- assert FileRev.query.count() == 1
- model_after = FileRev.query.first()
- serial = file_rev_schema.dump(model_after).data
- check_file(serial)
- for k in e.keys():
- assert e[k] == serial[k]
diff --git a/tests/routes.py b/tests/routes.py
deleted file mode 100644
index 79d97fe4..00000000
--- a/tests/routes.py
+++ /dev/null
@@ -1,67 +0,0 @@
-
-import json
-import tempfile
-import pytest
-import fatcat
-import fatcat.sql
-from fatcat.models import *
-from fixtures import *
-
-
-def test_static_routes(rich_app):
- app = rich_app
-
- for route in ('/health', '/robots.txt', '/', '/about'):
- rv = app.get(route)
- assert rv.status_code == 200
-
- assert app.get("/static/bogus/route").status_code == 404
-
-
-def test_all_views(rich_app):
- app = rich_app
-
- for route in ('work', 'release', 'creator', 'container', 'file'):
- print(route)
- rv = app.get('/{}/1'.format(route))
- assert rv.status_code == 200
-
- rv = app.get('/{}/999999999999'.format(route))
- assert rv.status_code == 404
-
- rv = app.get('/work/random')
- rv = app.get(rv.location)
- assert rv.status_code == 200
-
- rv = app.get('/work/random')
- assert rv.status_code == 302
-
- rv = app.get('/work/create')
- assert rv.status_code == 200
-
- rv = app.get('/release/random')
- assert rv.status_code == 302
-
- rv = app.get('/release/1/changelog')
- assert rv.status_code == 200
-
- rv = app.get('/editgroup/1')
- assert rv.status_code == 200
-
- rv = app.get('/editgroup/99999999')
- assert rv.status_code == 404
-
- rv = app.get('/editgroup/current')
- assert rv.status_code == 302
-
- rv = app.get('/editor/admin')
- assert rv.status_code == 200
-
- rv = app.get('/editor/bizzaro')
- assert rv.status_code == 404
-
- rv = app.get('/editor/admin/changelog')
- assert rv.status_code == 200
-
- rv = app.get('/editor/bizarro/changelog')
- assert rv.status_code == 404
diff --git a/tests/test_fixtures.py b/tests/test_fixtures.py
deleted file mode 100644
index 0a0d3176..00000000
--- a/tests/test_fixtures.py
+++ /dev/null
@@ -1,29 +0,0 @@
-
-import pytest
-import fatcat.api_client
-from fixtures import *
-
-
-def test_rich_app_fixture(rich_app):
- app = rich_app
-
- assert ChangelogEntry.query.count() == 1
-
- for cls in (WorkIdent, WorkRev, WorkEdit,
- ContainerIdent, ContainerRev, ContainerEdit,
- CreatorIdent, CreatorRev, CreatorEdit,
- FileIdent, FileRev, FileEdit):
- assert cls.query.count() == 1
- for cls in (ReleaseIdent, ReleaseRev, ReleaseEdit):
- assert cls.query.count() == 2
-
- for cls in (WorkIdent,
- ContainerIdent,
- CreatorIdent,
- FileIdent):
- assert cls.query.filter(cls.is_live==True).count() == 1
- assert ReleaseIdent.query.filter(ReleaseIdent.is_live==True).count() == 2
-
- # test that editor's active edit group is now invalid
- editor = Editor.query.first()
- assert editor.active_editgroup == None