diff options
Diffstat (limited to 'rust')
| -rw-r--r-- | rust/migrations/2018-05-12-001226_init/up.sql | 64 | ||||
| -rw-r--r-- | rust/src/database_schema.rs | 2 |
2 files changed, 45 insertions, 21 deletions
diff --git a/rust/migrations/2018-05-12-001226_init/up.sql b/rust/migrations/2018-05-12-001226_init/up.sql index efa02fab..1973e69d 100644 --- a/rust/migrations/2018-05-12-001226_init/up.sql +++ b/rust/migrations/2018-05-12-001226_init/up.sql @@ -138,8 +138,8 @@ CREATE TABLE release_rev ( doi TEXT, isbn13 TEXT, volume TEXT, - pages TEXT, issue TEXT, + pages TEXT, publisher TEXT, -- for books, NOT if container exists language TEXT -- primary language of the work's fulltext -- TODO: identifier table? @@ -229,6 +229,10 @@ CREATE TABLE file_release ( --------------------------------------------------------------------------- -- Fake data at the raw SQL level, for early development and testing +-- Convention: +-- * first entity is smallest possible (mostly null) +-- * second entity is rich (all fields/relations designed) but artificial +-- * third entity (and above) are realistic (real DOI, etc) BEGIN; @@ -255,22 +259,25 @@ INSERT INTO changelog (editgroup_id) VALUES (4), (5); -INSERT INTO container_rev (name, issnl, abbrev, coden) VALUES - ('MySpace Blog', null, null, null), - ('Journal of Trivial Results', '1234-5678', null, null); +INSERT INTO container_rev (name, publisher, issnl, abbrev, coden) VALUES + ('MySpace Blog', null, null, null, null), + ('Journal of Trivial Results', 'bogus publishing group', '1234-5678', 'Triv. Res.', 'CDNXYZ'), + ('PLOS Medicine', 'Public Library of Science', '1549-1277', 'PLoS med.', null); INSERT INTO container_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-1111-000000000001', true, 1, null), - ('00000000-0000-0000-1111-000000000002', true, 2, null); + ('00000000-0000-0000-1111-000000000002', true, 2, null), + ('00000000-0000-0000-1111-000000000003', true, 3, null); INSERT INTO container_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES ('00000000-0000-0000-1111-000000000001', 1, null, 4), - ('00000000-0000-0000-1111-000000000002', 2, null, 5); + ('00000000-0000-0000-1111-000000000002', 2, null, 5), + ('00000000-0000-0000-1111-000000000002', 3, null, 5); INSERT INTO creator_rev (display_name, given_name, surname, orcid) VALUES ('Grace Hopper', null, null, null), ('Christine Moran', 'Christine', 'Moran', '0000-0003-2088-7465'), - ('Emily Noether', 'Emily', 'Noether', null); + ('John P. A. Ioannidis', 'John', 'Ioannidis', '0000-0003-3118-6859'); INSERT INTO creator_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-2222-000000000001', true, 1, null), @@ -286,49 +293,66 @@ INSERT INTO creator_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES INSERT INTO file_rev (size, sha1, sha256, md5, url, mimetype) VALUES (null, null, null, null, null, null), - (4321, '7d97e98f8af710c7e7fe703abc8f639e0ee507c4', null, null, 'http://archive.org/robots.txt', 'text/plain'); + (4321, '7d97e98f8af710c7e7fe703abc8f639e0ee507c4', null, null, 'http://archive.org/robots.txt', 'text/plain'), + (255629, '3f242a192acc258bdfdb151943419437f440c313', 'ffc1005680cb620eec4c913437dfabbf311b535cfe16cbaeb2faec1f92afc362', 'f4de91152c7ab9fdc2a128f962faebff', 'http://journals.plos.org/plosmedicine/article/file?id=10.1371/journal.pmed.0020124&type=printable', 'application/pdf'); INSERT INTO file_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-3333-000000000001', true, 1, null), - ('00000000-0000-0000-3333-000000000002', true, 2, null); + ('00000000-0000-0000-3333-000000000002', true, 2, null), + ('00000000-0000-0000-3333-000000000003', true, 3, null); INSERT INTO file_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES ('00000000-0000-0000-3333-000000000001', 1, null, 4), - ('00000000-0000-0000-3333-000000000002', 2, null, 5); + ('00000000-0000-0000-3333-000000000002', 2, null, 5), + ('00000000-0000-0000-3333-000000000003', 3, null, 5); INSERT INTO work_rev (work_type, primary_release_id) VALUES (null, null), + ('pre-print', null), ('journal-article', null); INSERT INTO work_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-5555-000000000001', true, 1, null), - ('00000000-0000-0000-5555-000000000002', true, 2, null); + ('00000000-0000-0000-5555-000000000002', true, 2, null), + ('00000000-0000-0000-5555-000000000003', true, 3, null); INSERT INTO work_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES ('00000000-0000-0000-5555-000000000001', 1, null, 4), - ('00000000-0000-0000-5555-000000000002', 2, null, 5); + ('00000000-0000-0000-5555-000000000002', 2, null, 5), + ('00000000-0000-0000-5555-000000000002', 3, null, 5); -INSERT INTO release_rev (work_ident_id, container_ident_id, title, release_type, release_date, doi, isbn13, volume, pages, issue, publisher) VALUES - ('00000000-0000-0000-5555-000000000001', null, 'example title', null, null, null, null, null, null, null, null), - ('00000000-0000-0000-5555-000000000002', '00000000-0000-0000-1111-000000000001', 'bigger example', 'journal-article', '2018-01-01', null, '10.123/abc', '12', '5-9', 'IV', null); +INSERT INTO release_rev (work_ident_id, container_ident_id, title, release_type, release_status, release_date, doi, isbn13, volume, issue, pages, publisher, language) VALUES + ('00000000-0000-0000-5555-000000000001', null, 'example title', null, null, null, null, null, null, null, null, null, null), + ('00000000-0000-0000-5555-000000000002', '00000000-0000-0000-1111-000000000001', 'bigger example', 'journal-article', null,'2018-01-01', '10.123/abc', '99999-999-9-X', '12', 'IV', '5-9', 'bogus publishing group', 'cn'), + ('00000000-0000-0000-5555-000000000003', '00000000-0000-0000-1111-000000000003', 'Why Most Published Research Findings Are False', 'journal-article', 'published', '2005-08-30', '10.1371/journal.pmed.0020124', null, '2', '8', 'e124', 'Public Library of Science', 'en'); INSERT INTO release_ident (id, is_live, rev_id, redirect_id) VALUES ('00000000-0000-0000-4444-000000000001', true, 1, null), - ('00000000-0000-0000-4444-000000000002', true, 2, null); + ('00000000-0000-0000-4444-000000000002', true, 2, null), + ('00000000-0000-0000-4444-000000000003', true, 3, null); INSERT INTO release_edit (ident_id, rev_id, redirect_id, editgroup_id) VALUES ('00000000-0000-0000-4444-000000000001', 1, null, 4), - ('00000000-0000-0000-4444-000000000002', 2, null, 5); + ('00000000-0000-0000-4444-000000000002', 2, null, 5), + ('00000000-0000-0000-4444-000000000003', 3, null, 5); INSERT INTO release_contrib (release_rev, creator_ident_id, raw, role, index) VALUES (2, null, null, null, null), - (2, '00000000-0000-0000-2222-000000000002', 'some contrib', 'editor', 4); + (2, '00000000-0000-0000-2222-000000000002', 'some contrib', 'editor', 4), + (3, '00000000-0000-0000-2222-000000000003', 'John P. A. Ioannidis', 'author', 0); INSERT INTO release_ref (release_rev, target_release_ident_id, index, raw) VALUES (2, null, null, null), - (2, '00000000-0000-0000-4444-000000000001', 4, 'citation note'); + (2, '00000000-0000-0000-4444-000000000001', 4, 'citation note'), + (3, null, 0, 'Ioannidis JP, Haidich AB, Lau J. Any casualties in the clash of randomised and observational evidence? BMJ. 2001;322:879–880'), + (3, null, 1, 'Lawlor DA, Davey Smith G, Kundu D, Bruckdorfer KR, Ebrahim S. Those confounded vitamins: What can we learn from the differences between observational versus randomised trial evidence? Lancet. 2004;363:1724–1727.'), + (3, null, 2, 'Vandenbroucke JP. When are observational studies as credible as randomised trials? Lancet. 2004;363:1728–1731.'), + (3, null, 3, 'Michiels S, Koscielny S, Hill C. Prediction of cancer outcome with microarrays: A multiple random validation strategy. Lancet. 2005;365:488–492.'), + (3, null, 4, 'Ioannidis JPA, Ntzani EE, Trikalinos TA, Contopoulos-Ioannidis DG. Replication validity of genetic association studies. Nat Genet. 2001;29:306–309.'), + (3, null, 5, 'Colhoun HM, McKeigue PM, Davey Smith G. Problems of reporting genetic associations with complex outcomes. Lancet. 2003;361:865–872.'); INSERT INTO file_release (file_rev, target_release_ident_id) VALUES - (2, '00000000-0000-0000-4444-000000000002'); + (2, '00000000-0000-0000-4444-000000000002'), + (3, '00000000-0000-0000-4444-000000000003'); COMMIT; diff --git a/rust/src/database_schema.rs b/rust/src/database_schema.rs index d60bb6ee..34ca16c4 100644 --- a/rust/src/database_schema.rs +++ b/rust/src/database_schema.rs @@ -186,8 +186,8 @@ table! { doi -> Nullable<Text>, isbn13 -> Nullable<Text>, volume -> Nullable<Text>, - pages -> Nullable<Text>, issue -> Nullable<Text>, + pages -> Nullable<Text>, publisher -> Nullable<Text>, language -> Nullable<Text>, } |