11 files changed, 401 insertions, 345 deletions
diff --git a/python/Pipfile b/python/Pipfile
index 1cd513cb..30a663b9 100644
--- a/python/Pipfile
+++ b/python/Pipfile
@@ -44,7 +44,6 @@ loginpass = "==0.4"
 # loginpass 0.4 is not actually compatible with newer authlib
 authlib = "<0.13"
 requests = "==2.*"
-raven = {extras = ['flask'],version = "*"}
 confluent-kafka = "==1.*"
 python-dateutil = "==2.*"
 sickle = "==0.7.*"
@@ -71,7 +70,7 @@ fuzzycat = "==0.1.21"
 dynaconf = ">=3"
 pydantic = "==1.*"
 surt = "==0.3.*"
-sentry-sdk = { version = ">=0.14.0", extras = [] }
+sentry-sdk = {extras = ["flask"], version = "*"}
 
 [requires]
 # As of Fall 2020, Internet Archive cluster VMs are split between Ubuntu Xenial
diff --git a/python/Pipfile.lock b/python/Pipfile.lock
index 2c7d08b0..dc3ed169 100644
--- a/python/Pipfile.lock
+++ b/python/Pipfile.lock
@@ -1,7 +1,7 @@
 {
     "_meta": {
         "hash": {
-            "sha256": "09356afb9f22c9ed26f82383d5c9fa39cd7292969cda5d07cd38b2b4644a0397"
+            "sha256": "2c64a1ca2378c7336ae64f487948ba12c0e01f6c6bc71263488b00fd222ca589"
         },
         "pipfile-spec": 6,
         "requires": {
@@ -139,11 +139,11 @@
         },
         "charset-normalizer": {
             "hashes": [
-                "sha256:e019de665e2bcf9c2b64e2e5aa025fa991da8720daa3c1138cadd2fd1856aed0",
-                "sha256:f7af805c321bfa1ce6714c51f254e0d5bb5e5834039bc17db7ebe3a4cec9492b"
+                "sha256:1eecaa09422db5be9e29d7fc65664e6c33bd06f9ced7838578ba40d58bdf3721",
+                "sha256:b0b883e8e874edfdece9c28f314e3dd5badf067342e42fb162203335ae61aa2c"
             ],
             "markers": "python_version >= '3'",
-            "version": "==2.0.7"
+            "version": "==2.0.9"
         },
         "citeproc-py": {
             "hashes": [
@@ -197,29 +197,30 @@
         },
         "cryptography": {
             "hashes": [
-                "sha256:07bb7fbfb5de0980590ddfc7f13081520def06dc9ed214000ad4372fb4e3c7f6",
-                "sha256:18d90f4711bf63e2fb21e8c8e51ed8189438e6b35a6d996201ebd98a26abbbe6",
-                "sha256:1ed82abf16df40a60942a8c211251ae72858b25b7421ce2497c2eb7a1cee817c",
-                "sha256:22a38e96118a4ce3b97509443feace1d1011d0571fae81fc3ad35f25ba3ea999",
-                "sha256:2d69645f535f4b2c722cfb07a8eab916265545b3475fdb34e0be2f4ee8b0b15e",
-                "sha256:4a2d0e0acc20ede0f06ef7aa58546eee96d2592c00f450c9acb89c5879b61992",
-                "sha256:54b2605e5475944e2213258e0ab8696f4f357a31371e538ef21e8d61c843c28d",
-                "sha256:7075b304cd567694dc692ffc9747f3e9cb393cc4aa4fb7b9f3abd6f5c4e43588",
-                "sha256:7b7ceeff114c31f285528ba8b390d3e9cfa2da17b56f11d366769a807f17cbaa",
-                "sha256:7eba2cebca600a7806b893cb1d541a6e910afa87e97acf2021a22b32da1df52d",
-                "sha256:928185a6d1ccdb816e883f56ebe92e975a262d31cc536429041921f8cb5a62fd",
-                "sha256:9933f28f70d0517686bd7de36166dda42094eac49415459d9bdf5e7df3e0086d",
-                "sha256:a688ebcd08250eab5bb5bca318cc05a8c66de5e4171a65ca51db6bd753ff8953",
-                "sha256:abb5a361d2585bb95012a19ed9b2c8f412c5d723a9836418fab7aaa0243e67d2",
-                "sha256:c10c797ac89c746e488d2ee92bd4abd593615694ee17b2500578b63cad6b93a8",
-                "sha256:ced40344e811d6abba00295ced98c01aecf0c2de39481792d87af4fa58b7b4d6",
-                "sha256:d57e0cdc1b44b6cdf8af1d01807db06886f10177469312fbde8f44ccbb284bc9",
-                "sha256:d99915d6ab265c22873f1b4d6ea5ef462ef797b4140be4c9d8b179915e0985c6",
-                "sha256:eb80e8a1f91e4b7ef8b33041591e6d89b2b8e122d787e87eeb2b08da71bb16ad",
-                "sha256:ebeddd119f526bcf323a89f853afb12e225902a24d29b55fe18dd6fcb2838a76"
+                "sha256:2049f8b87f449fc6190350de443ee0c1dd631f2ce4fa99efad2984de81031681",
+                "sha256:231c4a69b11f6af79c1495a0e5a85909686ea8db946935224b7825cfb53827ed",
+                "sha256:24469d9d33217ffd0ce4582dfcf2a76671af115663a95328f63c99ec7ece61a4",
+                "sha256:2deab5ec05d83ddcf9b0916319674d3dae88b0e7ee18f8962642d3cde0496568",
+                "sha256:494106e9cd945c2cadfce5374fa44c94cfadf01d4566a3b13bb487d2e6c7959e",
+                "sha256:4c702855cd3174666ef0d2d13dcc879090aa9c6c38f5578896407a7028f75b9f",
+                "sha256:52f769ecb4ef39865719aedc67b4b7eae167bafa48dbc2a26dd36fa56460507f",
+                "sha256:5c49c9e8fb26a567a2b3fa0343c89f5d325447956cc2fc7231c943b29a973712",
+                "sha256:684993ff6f67000a56454b41bdc7e015429732d65a52d06385b6e9de6181c71e",
+                "sha256:6fbbbb8aab4053fa018984bb0e95a16faeb051dd8cca15add2a27e267ba02b58",
+                "sha256:8982c19bb90a4fa2aad3d635c6d71814e38b643649b4000a8419f8691f20ac44",
+                "sha256:9511416e85e449fe1de73f7f99b21b3aa04fba4c4d335d30c486ba3756e3a2a6",
+                "sha256:97199a13b772e74cdcdb03760c32109c808aff7cd49c29e9cf4b7754bb725d1d",
+                "sha256:a776bae1629c8d7198396fd93ec0265f8dd2341c553dc32b976168aaf0e6a636",
+                "sha256:aa94d617a4cd4cdf4af9b5af65100c036bce22280ebb15d8b5262e8273ebc6ba",
+                "sha256:b17d83b3d1610e571fedac21b2eb36b816654d6f7496004d6a0d32f99d1d8120",
+                "sha256:d73e3a96c38173e0aa5646c31bf8473bc3564837977dd480f5cbeacf1d7ef3a3",
+                "sha256:d91bc9f535599bed58f6d2e21a2724cb0c3895bf41c6403fe881391d29096f1d",
+                "sha256:ef216d13ac8d24d9cd851776662f75f8d29c9f2d05cdcc2d34a18d32463a9b0b",
+                "sha256:f6a5a85beb33e57998dc605b9dbe7deaa806385fdf5c4810fb849fcd04640c81",
+                "sha256:f92556f94e476c1b616e6daec5f7ddded2c082efa7cee7f31c7aeda615906ed8"
             ],
             "markers": "python_version >= '3.6'",
-            "version": "==35.0.0"
+            "version": "==36.0.0"
         },
         "dateparser": {
             "hashes": [
@@ -266,11 +267,11 @@
         },
         "filelock": {
             "hashes": [
-                "sha256:7afc856f74fa7006a289fd10fa840e1eebd8bbff6bffb69c26c54a0512ea8cf8",
-                "sha256:bb2a1c717df74c48a2d00ed625e5a66f8572a3a30baacb7657add1d7bac4097b"
+                "sha256:2e139a228bcf56dd8b2274a65174d005c4a6b68540ee0bdbb92c76f43f29f7e8",
+                "sha256:93d512b32a23baf4cac44ffd72ccf70732aeff7b8050fcaf6d3ec406d954baf4"
             ],
             "markers": "python_version >= '3.6'",
-            "version": "==3.3.2"
+            "version": "==3.4.0"
         },
         "flask": {
             "hashes": [
@@ -321,11 +322,11 @@
         },
         "flask-wtf": {
             "hashes": [
-                "sha256:6ff7af73458f182180906a37a783e290bdc8a3817fe4ad17227563137ca285bf",
-                "sha256:ff177185f891302dc253437fe63081e7a46a4e99aca61dfe086fb23e54fff2dc"
+                "sha256:01feccfc395405cea48a3f36c23f0d766e2cc6fd2a5a065ad50ad3e5827ec797",
+                "sha256:872fbb17b5888bfc734edbdcf45bc08fb365ca39f69d25dc752465a455517b28"
             ],
             "index": "pypi",
-            "version": "==0.15.1"
+            "version": "==1.0.0"
         },
         "ftfy": {
             "hashes": [
@@ -380,11 +381,11 @@
         },
         "jinja2": {
             "hashes": [
-                "sha256:827a0e32839ab1600d4eb1c4c33ec5a8edfbc5cb42dafa13b81f182f97784b45",
-                "sha256:8569982d3f0889eed11dd620c706d39b60c36d6d25843961f33f77fb6bc6b20c"
+                "sha256:077ce6014f7b40d03b47d1f1ca4b0fc8328a692bd284016f806ed0eaca390ad8",
+                "sha256:611bb273cd68f3b993fabdc4064fc858c5b47a973cb5aa7999ec1ba405c87cd7"
             ],
             "markers": "python_version >= '3.6'",
-            "version": "==3.0.2"
+            "version": "==3.0.3"
         },
         "langdetect": {
             "hashes": [
@@ -404,67 +405,69 @@
         },
         "lxml": {
             "hashes": [
-                "sha256:08eb9200d88b376a8ed5e50f1dc1d1a45b49305169674002a3b5929943390591",
-                "sha256:0b12c95542f04d10cba46b3ff28ea52ea56995b78cf918f0b11b05e75812bb79",
-                "sha256:0c15e1cd55055956e77b0732270f1c6005850696bc3ef3e03d01e78af84eaa42",
-                "sha256:15d0381feb56f08f78c5cc4fc385ddfe0bde1456e37f54a9322833371aec4060",
-                "sha256:20d7c8d90d449c6a353b15ee0459abae8395dbe59ad01e406ccbf30cd81c6f98",
-                "sha256:240db6f3228d26e3c6f4fad914b9ddaaf8707254e8b3efd564dc680c8ec3c264",
-                "sha256:2901625f4a878a055d275beedc20ba9cb359cefc4386a967222fee29eb236038",
-                "sha256:2eb90f6ec3c236ef2f1bb38aee7c0d23e77d423d395af6326e7cca637519a4cb",
-                "sha256:351482da8dd028834028537f08724b1de22d40dcf3bb723b469446564f409074",
-                "sha256:35752ee40f7bbf6adc9ff4e1f4b84794a3593736dcce80db32e3c2aa85e294ac",
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-                "sha256:4341d135f5660db10184963d9c3418c3e28d7f868aaf8b11a323ebf85813f7f4",
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@@ -580,11 +583,11 @@
         },
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@@ -678,11 +681,11 @@
         },
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@@ -783,70 +786,84 @@
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@@ -872,13 +889,15 @@
             "version": "==1.3.0"
         },
         "sentry-sdk": {
-            "extras": [],
+            "extras": [
+                "flask"
+            ],
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-                "sha256:c091cc7115ff25fe3a0e410dbecd7a996f81a3f6137d2272daef32d6c3cfa6dc"
+                "sha256:2a1757d6611e4bec7d672c2b7ef45afef79fed201d064f53994753303944f5a8",
+                "sha256:e4cb107e305b2c1b919414775fa73a9997f996447417d22b98e7610ded1e9eb5"
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-            "version": "==1.4.3"
+            "version": "==1.5.1"
         },
         "sickle": {
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@@ -898,11 +917,11 @@
         },
         "soupsieve": {
             "hashes": [
-                "sha256:052774848f448cf19c7e959adf5566904d525f33a3f8b6ba6f6f8f26ec7de0cc",
-                "sha256:c2c1c2d44f158cdbddab7824a9af8c4f83c76b1e23e049479aa432feb6c4c23b"
+                "sha256:1a3cca2617c6b38c0343ed661b1fa5de5637f257d4fe22bd9f1338010a1efefb",
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-            "version": "==2.2.1"
+            "version": "==2.3.1"
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         "surt": {
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@@ -929,11 +948,11 @@
         },
         "typing-extensions": {
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-            "version": "==3.10.0.2"
+            "markers": "python_version >= '3.6'",
+            "version": "==4.0.1"
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@@ -956,7 +975,7 @@
                 "sha256:215fe33c9d1c889fa823ccb66df91b02524eb8cc8c9c80f9c5b8129754d27829",
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+            "markers": "python_version >= '3.5'",
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@@ -1044,11 +1063,11 @@
     "develop": {
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+            "version": "==2.9.0"
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@@ -1082,11 +1101,11 @@
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@@ -1098,55 +1117,56 @@
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@@ -1182,27 +1202,27 @@
         },
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@@ -1249,16 +1269,17 @@
         },
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                 "sha256:0aadfb2d3935988ec3815952e44058a3100499f5be5b28c34ac9d79f002a4a9a",
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@@ -1293,19 +1314,19 @@
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@@ -1347,11 +1368,11 @@
         },
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@@ -1362,11 +1383,11 @@
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@@ -1394,19 +1415,19 @@
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@@ -1449,57 +1470,82 @@
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@@ -1535,11 +1581,11 @@
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@@ -1551,27 +1597,27 @@
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-                "sha256:b279284e51f668e38ee12d9665e4d789089f532dc2a0be4a1508ca0efd98ba9e",
-                "sha256:ba1d108d512e294b6080c37f6ae7cb2a2abf527560e2b671d1786c1fc46b541a"
+                "sha256:0893e112e1510bbb67f537941c92192de7472e51bf7f236e0e583866f0ed933e",
+                "sha256:853571b3accc188976c0f4feffcaebf6cdfc170082b5e43f3358aa78de61f531"
             ],
             "index": "pypi",
-            "version": "==2.25.11"
+            "version": "==2.26.1"
         },
         "types-toml": {
             "hashes": [
@@ -1583,11 +1629,11 @@
         },
         "typing-extensions": {
             "hashes": [
-                "sha256:49f75d16ff11f1cd258e1b988ccff82a3ca5570217d7ad8c5f48205dd99a677e",
-                "sha256:d8226d10bc02a29bcc81df19a26e56a9647f8b0a6d4a83924139f4a8b01f17b7",
-                "sha256:f1d25edafde516b146ecd0613dabcc61409817af4766fbbcfb8d1ad4ec441a34"
+                "sha256:4ca091dea149f945ec56afb48dae714f21e8692ef22a395223bcd328961b6a0e",
+                "sha256:7f001e5ac290a0c0401508864c7ec868be4e701886d5b573a9528ed3973d9d3b"
             ],
-            "version": "==3.10.0.2"
+            "markers": "python_version >= '3.6'",
+            "version": "==4.0.1"
         },
         "urllib3": {
             "hashes": [
diff --git a/python/fatcat_cleanup.py b/python/fatcat_cleanup.py
index b8d0ee4d..b5e50425 100755
--- a/python/fatcat_cleanup.py
+++ b/python/fatcat_cleanup.py
@@ -4,13 +4,13 @@ import argparse
 import os
 import sys
 
-import raven
+import sentry_sdk
 
 from fatcat_tools import authenticated_api
 from fatcat_tools.cleanups import FileCleaner, JsonLinePusher
 
 # Yep, a global. Gets DSN from `SENTRY_DSN` environment variable
-sentry_client = raven.Client()
+sentry_client = sentry_sdk.init()
 
 
 def run_files(args: argparse.Namespace) -> None:
diff --git a/python/fatcat_harvest.py b/python/fatcat_harvest.py
index be3cb888..4180dc16 100755
--- a/python/fatcat_harvest.py
+++ b/python/fatcat_harvest.py
@@ -4,7 +4,7 @@ import argparse
 import datetime
 import sys
 
-import raven
+import sentry_sdk
 
 from fatcat_tools.harvest import (
     HarvestArxivWorker,
@@ -16,7 +16,7 @@ from fatcat_tools.harvest import (
 )
 
 # Yep, a global. Gets DSN from `SENTRY_DSN` environment variable
-sentry_client = raven.Client()
+sentry_client = sentry_sdk.init()
 
 
 def run_crossref(args: argparse.Namespace) -> None:
diff --git a/python/fatcat_import.py b/python/fatcat_import.py
index 33679868..5c480fc5 100755
--- a/python/fatcat_import.py
+++ b/python/fatcat_import.py
@@ -4,7 +4,7 @@ import argparse
 import os
 import sys
 
-import raven
+import sentry_sdk
 
 from fatcat_tools import authenticated_api
 from fatcat_tools.importers import (
@@ -45,7 +45,7 @@ from fatcat_tools.importers import (
 )
 
 # Yep, a global. Gets DSN from `SENTRY_DSN` environment variable
-sentry_client = raven.Client()
+sentry_client = sentry_sdk.init()
 
 
 def run_crossref(args: argparse.Namespace) -> None:
diff --git a/python/fatcat_ingest.py b/python/fatcat_ingest.py
index 71965f14..964907c8 100755
--- a/python/fatcat_ingest.py
+++ b/python/fatcat_ingest.py
@@ -11,14 +11,14 @@ import sys
 from collections import Counter
 
 import elasticsearch
-import raven
+import sentry_sdk
 from elasticsearch_dsl import Q, Search
 
 from fatcat_tools import kafka_fail_fast, public_api, simple_kafka_producer
 from fatcat_tools.transforms import release_ingest_request
 
 # Yep, a global. Gets DSN from `SENTRY_DSN` environment variable
-sentry_client = raven.Client()
+sentry_client = sentry_sdk.init()
 
 
 def _init_search(args: argparse.Namespace) -> Search:
diff --git a/python/fatcat_review.py b/python/fatcat_review.py
index 7869eb60..05a00681 100755
--- a/python/fatcat_review.py
+++ b/python/fatcat_review.py
@@ -3,13 +3,13 @@
 import argparse
 import sys
 
-import raven
+import sentry_sdk
 
 from fatcat_tools import authenticated_api
 from fatcat_tools.reviewers import DummyReviewBot
 
 # Yep, a global. Gets DSN from `SENTRY_DSN` environment variable
-sentry_client = raven.Client()
+sentry_client = sentry_sdk.init()
 
 
 def run_dummy(args: argparse.Namespace) -> None:
diff --git a/python/fatcat_tools/importers/crossref.py b/python/fatcat_tools/importers/crossref.py
index 52bd7465..9150322b 100644
--- a/python/fatcat_tools/importers/crossref.py
+++ b/python/fatcat_tools/importers/crossref.py
@@ -137,6 +137,9 @@ class CrossrefImporter(EntityImporter):
                     index = None
                 raw_affiliation = None
                 affiliation_list = am.get("affiliation") or []
+                # TODO: currently requiring a "name" in all affiliations. Could
+                # add ROR support (via identifier) in the near future
+                affiliation_list = [a for a in affiliation_list if "name" in a]
                 if affiliation_list and len(affiliation_list) > 0:
                     raw_affiliation = affiliation_list[0]["name"]
                     if len(affiliation_list) > 1:
diff --git a/python/fatcat_web/__init__.py b/python/fatcat_web/__init__.py
index 5cb56d0b..70f8ad4a 100644
--- a/python/fatcat_web/__init__.py
+++ b/python/fatcat_web/__init__.py
@@ -3,6 +3,7 @@ from typing import Any
 
 import elasticsearch
 import fatcat_openapi_client
+import sentry_sdk
 from authlib.flask.client import OAuth
 from flask import Flask
 from flask.logging import create_logger
@@ -13,7 +14,7 @@ from flask_mwoauth import MWOAuth
 from flask_uuid import FlaskUUID
 from flask_wtf.csrf import CSRFProtect
 from loginpass import GitHub, Gitlab, ORCiD, create_flask_blueprint
-from raven.contrib.flask import Sentry
+from sentry_sdk.integrations.flask import FlaskIntegration
 
 from fatcat_web.types import AnyResponse
 from fatcat_web.web_config import Config
@@ -44,7 +45,7 @@ login_manager.login_view = "/auth/login"
 oauth = OAuth(app)
 
 # Grabs sentry config from SENTRY_DSN environment variable
-sentry = Sentry(app)
+sentry_sdk.init(integrations=[FlaskIntegration()])
 
 conf = fatcat_openapi_client.Configuration()
 conf.host = Config.FATCAT_API_HOST
@@ -81,7 +82,7 @@ mwoauth = MWOAuth(
 mwoauth.handshaker.user_agent = "fatcat.wiki;python_web_interface"
 app.register_blueprint(mwoauth.bp, url_prefix="/auth/wikipedia")
 
-app.es_client = elasticsearch.Elasticsearch(Config.ELASTICSEARCH_BACKEND)
+app.es_client = elasticsearch.Elasticsearch(Config.ELASTICSEARCH_BACKEND, timeout=40.0)
 
 from fatcat_web import auth, cors, editing_routes, forms, ref_routes, routes
 
diff --git a/python/fatcat_web/web_config.py b/python/fatcat_web/web_config.py
index 82525487..55d233f3 100644
--- a/python/fatcat_web/web_config.py
+++ b/python/fatcat_web/web_config.py
@@ -12,8 +12,6 @@ import os
 import subprocess
 from typing import Union
 
-import raven
-
 basedir = os.path.abspath(os.path.dirname(__file__))
 
 
@@ -45,6 +43,15 @@ def test_bool_str() -> None:
     assert bool_str("FALSE") is False
 
 
+def fetch_git_sha():
+    """
+    Get short commit id, runnable anywhere within a git repository.
+    """
+    return (
+        subprocess.check_output(["git", "rev-parse", "--short", "HEAD"]).decode("ascii").strip()
+    )
+
+
 class Config(object):
     GIT_REVISION = (
         subprocess.check_output(["git", "describe", "--tags", "--long", "--always"])
@@ -137,7 +144,7 @@ class Config(object):
         PERMANENT_SESSION_LIFETIME = 2678400  # 31 days, in seconds
 
     try:
-        GIT_RELEASE = raven.fetch_git_sha("..")
+        GIT_RELEASE = fetch_git_sha()
     except Exception as e:
         print("WARNING: couldn't set sentry git release automatically: " + str(e))
         GIT_RELEASE = None
diff --git a/python/fatcat_worker.py b/python/fatcat_worker.py
index 67ea8451..a7dcf755 100755
--- a/python/fatcat_worker.py
+++ b/python/fatcat_worker.py
@@ -3,7 +3,7 @@
 import argparse
 import sys
 
-import raven
+import sentry_sdk
 
 from fatcat_tools import public_api
 from fatcat_tools.workers import (
@@ -16,7 +16,7 @@ from fatcat_tools.workers import (
 )
 
 # Yep, a global. Gets DSN from `SENTRY_DSN` environment variable
-sentry_client = raven.Client()
+sentry_client = sentry_sdk.init()
 
 
 def run_changelog(args: argparse.Namespace) -> None: