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-rw-r--r--python/Pipfile2
-rw-r--r--python/Pipfile.lock481
-rwxr-xr-xpython/fatcat_export.py61
-rw-r--r--python/fatcat_tools/__init__.py2
-rw-r--r--python/fatcat_tools/transforms.py165
5 files changed, 473 insertions, 238 deletions
diff --git a/python/Pipfile b/python/Pipfile
index b04bb91a..e092d6b8 100644
--- a/python/Pipfile
+++ b/python/Pipfile
@@ -33,6 +33,8 @@ sickle = "*"
python-snappy = "*"
pymacaroons = "*"
ftfy= "*"
+citeproc-py = "*"
+citeproc-py-styles = "*"
[requires]
# Python 3.5 is the bundled (system) version of python for Ubuntu 16.04
diff --git a/python/Pipfile.lock b/python/Pipfile.lock
index f2d39a99..9625675f 100644
--- a/python/Pipfile.lock
+++ b/python/Pipfile.lock
@@ -1,7 +1,7 @@
{
"_meta": {
"hash": {
- "sha256": "8f98bb3f6a3083c8b03cb68d1ee48b25449a950dd8a9d15189f2eb4fae48f760"
+ "sha256": "a3b122d1d415416d29e66ef74780be92b32699bf5ceac7b36d988e0cc66df025"
},
"pipfile-spec": 6,
"requires": {
@@ -38,47 +38,43 @@
},
"certifi": {
"hashes": [
- "sha256:47f9c83ef4c0c621eaef743f133f09fa8a74a9b75f037e8624f83bd1b6626cb7",
- "sha256:993f830721089fef441cdfeb4b2c8c9df86f0c63239f06bd025a76a7daddb033"
+ "sha256:59b7658e26ca9c7339e00f8f4636cdfe59d34fa37b9b04f6f9e9926b3cece1a5",
+ "sha256:b26104d6835d1f5e49452a26eb2ff87fe7090b89dfcaee5ea2212697e1e1d7ae"
],
- "version": "==2018.11.29"
+ "version": "==2019.3.9"
},
"cffi": {
"hashes": [
- "sha256:151b7eefd035c56b2b2e1eb9963c90c6302dc15fbd8c1c0a83a163ff2c7d7743",
- "sha256:1553d1e99f035ace1c0544050622b7bc963374a00c467edafac50ad7bd276aef",
- "sha256:1b0493c091a1898f1136e3f4f991a784437fac3673780ff9de3bcf46c80b6b50",
- "sha256:2ba8a45822b7aee805ab49abfe7eec16b90587f7f26df20c71dd89e45a97076f",
- "sha256:3bb6bd7266598f318063e584378b8e27c67de998a43362e8fce664c54ee52d30",
- "sha256:3c85641778460581c42924384f5e68076d724ceac0f267d66c757f7535069c93",
- "sha256:3eb6434197633b7748cea30bf0ba9f66727cdce45117a712b29a443943733257",
- "sha256:495c5c2d43bf6cebe0178eb3e88f9c4aa48d8934aa6e3cddb865c058da76756b",
- "sha256:4c91af6e967c2015729d3e69c2e51d92f9898c330d6a851bf8f121236f3defd3",
- "sha256:57b2533356cb2d8fac1555815929f7f5f14d68ac77b085d2326b571310f34f6e",
- "sha256:770f3782b31f50b68627e22f91cb182c48c47c02eb405fd689472aa7b7aa16dc",
- "sha256:79f9b6f7c46ae1f8ded75f68cf8ad50e5729ed4d590c74840471fc2823457d04",
- "sha256:7a33145e04d44ce95bcd71e522b478d282ad0eafaf34fe1ec5bbd73e662f22b6",
- "sha256:857959354ae3a6fa3da6651b966d13b0a8bed6bbc87a0de7b38a549db1d2a359",
- "sha256:87f37fe5130574ff76c17cab61e7d2538a16f843bb7bca8ebbc4b12de3078596",
- "sha256:95d5251e4b5ca00061f9d9f3d6fe537247e145a8524ae9fd30a2f8fbce993b5b",
- "sha256:9d1d3e63a4afdc29bd76ce6aa9d58c771cd1599fbba8cf5057e7860b203710dd",
- "sha256:a36c5c154f9d42ec176e6e620cb0dd275744aa1d804786a71ac37dc3661a5e95",
- "sha256:a6a5cb8809091ec9ac03edde9304b3ad82ad4466333432b16d78ef40e0cce0d5",
- "sha256:ae5e35a2c189d397b91034642cb0eab0e346f776ec2eb44a49a459e6615d6e2e",
- "sha256:b0f7d4a3df8f06cf49f9f121bead236e328074de6449866515cea4907bbc63d6",
- "sha256:b75110fb114fa366b29a027d0c9be3709579602ae111ff61674d28c93606acca",
- "sha256:ba5e697569f84b13640c9e193170e89c13c6244c24400fc57e88724ef610cd31",
- "sha256:be2a9b390f77fd7676d80bc3cdc4f8edb940d8c198ed2d8c0be1319018c778e1",
- "sha256:ca1bd81f40adc59011f58159e4aa6445fc585a32bb8ac9badf7a2c1aa23822f2",
- "sha256:d5d8555d9bfc3f02385c1c37e9f998e2011f0db4f90e250e5bc0c0a85a813085",
- "sha256:e55e22ac0a30023426564b1059b035973ec82186ddddbac867078435801c7801",
- "sha256:e90f17980e6ab0f3c2f3730e56d1fe9bcba1891eeea58966e89d352492cc74f4",
- "sha256:ecbb7b01409e9b782df5ded849c178a0aa7c906cf8c5a67368047daab282b184",
- "sha256:ed01918d545a38998bfa5902c7c00e0fee90e957ce036a4000a88e3fe2264917",
- "sha256:edabd457cd23a02965166026fd9bfd196f4324fe6032e866d0f3bd0301cd486f",
- "sha256:fdf1c1dc5bafc32bc5d08b054f94d659422b05aba244d6be4ddc1c72d9aa70fb"
- ],
- "version": "==1.11.5"
+ "sha256:00b97afa72c233495560a0793cdc86c2571721b4271c0667addc83c417f3d90f",
+ "sha256:0ba1b0c90f2124459f6966a10c03794082a2f3985cd699d7d63c4a8dae113e11",
+ "sha256:0bffb69da295a4fc3349f2ec7cbe16b8ba057b0a593a92cbe8396e535244ee9d",
+ "sha256:21469a2b1082088d11ccd79dd84157ba42d940064abbfa59cf5f024c19cf4891",
+ "sha256:2e4812f7fa984bf1ab253a40f1f4391b604f7fc424a3e21f7de542a7f8f7aedf",
+ "sha256:2eac2cdd07b9049dd4e68449b90d3ef1adc7c759463af5beb53a84f1db62e36c",
+ "sha256:2f9089979d7456c74d21303c7851f158833d48fb265876923edcb2d0194104ed",
+ "sha256:3dd13feff00bddb0bd2d650cdb7338f815c1789a91a6f68fdc00e5c5ed40329b",
+ "sha256:4065c32b52f4b142f417af6f33a5024edc1336aa845b9d5a8d86071f6fcaac5a",
+ "sha256:51a4ba1256e9003a3acf508e3b4f4661bebd015b8180cc31849da222426ef585",
+ "sha256:59888faac06403767c0cf8cfb3f4a777b2939b1fbd9f729299b5384f097f05ea",
+ "sha256:59c87886640574d8b14910840327f5cd15954e26ed0bbd4e7cef95fa5aef218f",
+ "sha256:610fc7d6db6c56a244c2701575f6851461753c60f73f2de89c79bbf1cc807f33",
+ "sha256:70aeadeecb281ea901bf4230c6222af0248c41044d6f57401a614ea59d96d145",
+ "sha256:71e1296d5e66c59cd2c0f2d72dc476d42afe02aeddc833d8e05630a0551dad7a",
+ "sha256:8fc7a49b440ea752cfdf1d51a586fd08d395ff7a5d555dc69e84b1939f7ddee3",
+ "sha256:9b5c2afd2d6e3771d516045a6cfa11a8da9a60e3d128746a7fe9ab36dfe7221f",
+ "sha256:9c759051ebcb244d9d55ee791259ddd158188d15adee3c152502d3b69005e6bd",
+ "sha256:b4d1011fec5ec12aa7cc10c05a2f2f12dfa0adfe958e56ae38dc140614035804",
+ "sha256:b4f1d6332339ecc61275bebd1f7b674098a66fea11a00c84d1c58851e618dc0d",
+ "sha256:c030cda3dc8e62b814831faa4eb93dd9a46498af8cd1d5c178c2de856972fd92",
+ "sha256:c2e1f2012e56d61390c0e668c20c4fb0ae667c44d6f6a2eeea5d7148dcd3df9f",
+ "sha256:c37c77d6562074452120fc6c02ad86ec928f5710fbc435a181d69334b4de1d84",
+ "sha256:c8149780c60f8fd02752d0429246088c6c04e234b895c4a42e1ea9b4de8d27fb",
+ "sha256:cbeeef1dc3c4299bd746b774f019de9e4672f7cc666c777cd5b409f0b746dac7",
+ "sha256:e113878a446c6228669144ae8a56e268c91b7f1fafae927adc4879d9849e0ea7",
+ "sha256:e21162bf941b85c0cda08224dade5def9360f53b09f9f259adb85fc7dd0e7b35",
+ "sha256:fb6934ef4744becbda3143d30c6604718871495a5e36c408431bf33d9c146889"
+ ],
+ "version": "==1.12.2"
},
"chardet": {
"hashes": [
@@ -87,6 +83,22 @@
],
"version": "==3.0.4"
},
+ "citeproc-py": {
+ "hashes": [
+ "sha256:ed513dbc76f782b5e98126d6bebbd1284841fcf199ec9dda552e2bce864adadf",
+ "sha256:ee1569e8b1f2c057c7893bbb067986bc362a6c861009d310700a12a1a0107b57"
+ ],
+ "index": "pypi",
+ "version": "==0.4.0"
+ },
+ "citeproc-py-styles": {
+ "hashes": [
+ "sha256:3856920968f1c5873bff2e85e4753131797f27a034c59f2b2e8dd625f1732a69",
+ "sha256:9c1c8c8eba0f45435f20ee9818019d5ce48707dc309bf72848aab3c98266dd2a"
+ ],
+ "index": "pypi",
+ "version": "==0.1.1"
+ },
"click": {
"hashes": [
"sha256:2335065e6395b9e67ca716de5f7526736bfa6ceead690adf616d925bdc622b13",
@@ -96,27 +108,27 @@
},
"cryptography": {
"hashes": [
- "sha256:05b3ded5e88747d28ee3ef493f2b92cbb947c1e45cf98cfef22e6d38bb67d4af",
- "sha256:06826e7f72d1770e186e9c90e76b4f84d90cdb917b47ff88d8dc59a7b10e2b1e",
- "sha256:08b753df3672b7066e74376f42ce8fc4683e4fd1358d34c80f502e939ee944d2",
- "sha256:2cd29bd1911782baaee890544c653bb03ec7d95ebeb144d714b0f5c33deb55c7",
- "sha256:31e5637e9036d966824edaa91bf0aa39dc6f525a1c599f39fd5c50340264e079",
- "sha256:42fad67d7072216a49e34f923d8cbda9edacbf6633b19a79655e88a1b4857063",
- "sha256:4946b67235b9d2ea7d31307be9d5ad5959d6c4a8f98f900157b47abddf698401",
- "sha256:522fdb2809603ee97a4d0ef2f8d617bc791eb483313ba307cb9c0a773e5e5695",
- "sha256:6f841c7272645dd7c65b07b7108adfa8af0aaea57f27b7f59e01d41f75444c85",
- "sha256:7d335e35306af5b9bc0560ca39f740dfc8def72749645e193dd35be11fb323b3",
- "sha256:8504661ffe324837f5c4607347eeee4cf0fcad689163c6e9c8d3b18cf1f4a4ad",
- "sha256:9260b201ce584d7825d900c88700aa0bd6b40d4ebac7b213857bd2babee9dbca",
- "sha256:9a30384cc402eac099210ab9b8801b2ae21e591831253883decdb4513b77a3cd",
- "sha256:9e29af877c29338f0cab5f049ccc8bd3ead289a557f144376c4fbc7d1b98914f",
- "sha256:ab50da871bc109b2d9389259aac269dd1b7c7413ee02d06fe4e486ed26882159",
- "sha256:b13c80b877e73bcb6f012813c6f4a9334fcf4b0e96681c5a15dac578f2eedfa0",
- "sha256:bfe66b577a7118e05b04141f0f1ed0959552d45672aa7ecb3d91e319d846001e",
- "sha256:e091bd424567efa4b9d94287a952597c05d22155a13716bf5f9f746b9dc906d3",
- "sha256:fa2b38c8519c5a3aa6e2b4e1cf1a549b54acda6adb25397ff542068e73d1ed00"
- ],
- "version": "==2.5"
+ "sha256:066f815f1fe46020877c5983a7e747ae140f517f1b09030ec098503575265ce1",
+ "sha256:210210d9df0afba9e000636e97810117dc55b7157c903a55716bb73e3ae07705",
+ "sha256:26c821cbeb683facb966045e2064303029d572a87ee69ca5a1bf54bf55f93ca6",
+ "sha256:2afb83308dc5c5255149ff7d3fb9964f7c9ee3d59b603ec18ccf5b0a8852e2b1",
+ "sha256:2db34e5c45988f36f7a08a7ab2b69638994a8923853dec2d4af121f689c66dc8",
+ "sha256:409c4653e0f719fa78febcb71ac417076ae5e20160aec7270c91d009837b9151",
+ "sha256:45a4f4cf4f4e6a55c8128f8b76b4c057027b27d4c67e3fe157fa02f27e37830d",
+ "sha256:48eab46ef38faf1031e58dfcc9c3e71756a1108f4c9c966150b605d4a1a7f659",
+ "sha256:6b9e0ae298ab20d371fc26e2129fd683cfc0cfde4d157c6341722de645146537",
+ "sha256:6c4778afe50f413707f604828c1ad1ff81fadf6c110cb669579dea7e2e98a75e",
+ "sha256:8c33fb99025d353c9520141f8bc989c2134a1f76bac6369cea060812f5b5c2bb",
+ "sha256:9873a1760a274b620a135054b756f9f218fa61ca030e42df31b409f0fb738b6c",
+ "sha256:9b069768c627f3f5623b1cbd3248c5e7e92aec62f4c98827059eed7053138cc9",
+ "sha256:9e4ce27a507e4886efbd3c32d120db5089b906979a4debf1d5939ec01b9dd6c5",
+ "sha256:acb424eaca214cb08735f1a744eceb97d014de6530c1ea23beb86d9c6f13c2ad",
+ "sha256:c8181c7d77388fe26ab8418bb088b1a1ef5fde058c6926790c8a0a3d94075a4a",
+ "sha256:d4afbb0840f489b60f5a580a41a1b9c3622e08ecb5eec8614d4fb4cd914c4460",
+ "sha256:d9ed28030797c00f4bc43c86bf819266c76a5ea61d006cd4078a93ebf7da6bfd",
+ "sha256:e603aa7bb52e4e8ed4119a58a03b60323918467ef209e6ff9db3ac382e5cf2c6"
+ ],
+ "version": "==2.6.1"
},
"fatcat-client": {
"editable": true,
@@ -198,67 +210,67 @@
},
"lxml": {
"hashes": [
- "sha256:0dd6589fa75d369ba06d2b5f38dae107f76ea127f212f6a7bee134f6df2d1d21",
- "sha256:1afbac344aa68c29e81ab56c1a9411c3663157b5aee5065b7fa030b398d4f7e0",
- "sha256:1baad9d073692421ad5dbbd81430aba6c7f5fdc347f03537ae046ddf2c9b2297",
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- "sha256:1f179dc8b2643715f020f4d119d5529b02cd794c1c8f305868b73b8674d2a03f",
- "sha256:241fb7bdf97cb1df1edfa8f0bcdfd80525d4023dac4523a241907c8b2f44e541",
- "sha256:2f9765ee5acd3dbdcdc0d0c79309e01f7c16bc8d39b49250bf88de7b46daaf58",
- "sha256:312e1e1b1c3ce0c67e0b8105317323e12807955e8186872affb667dbd67971f6",
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- "sha256:abe12886554634ed95416a46701a917784cb2b4c77bfacac6916681d49bbf83d",
- "sha256:b4f67b5183bd5f9bafaeb76ad119e977ba570d2b0e61202f534ac9b5c33b4485",
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- "sha256:c6f24149a19f611a415a51b9bc5f17b6c2f698e0d6b41ffb3fa9f24d35d05d73",
- "sha256:d1e111b3ab98613115a208c1017f266478b0ab224a67bc8eac670fa0bad7d488",
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- "sha256:de2e5b0828a9d285f909b5d2e9d43f1cf6cf21fe65bc7660bdaa1780c7b58298",
- "sha256:f726444b8e909c4f41b4fde416e1071cf28fa84634bfb4befdf400933b6463af"
+ "sha256:0358b9e9642bc7d39aac5cffe9884a99a5ca68e5e2c1b89e570ed60da9139908",
+ "sha256:091a359c4dafebbecd3959d9013f1b896b5371859165e4e50b01607a98d9e3e2",
+ "sha256:1998e4e60603c64bcc35af61b4331ab3af087457900d3980e18d190e17c3a697",
+ "sha256:2000b4088dee9a41f459fddaf6609bba48a435ce6374bb254c5ccdaa8928c5ba",
+ "sha256:2afb0064780d8aaf165875be5898c1866766e56175714fa5f9d055433e92d41d",
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+ "sha256:3d0bbd2e1a28b4429f24fd63a122a450ce9edb7a8063d070790092d7343a1aa4",
+ "sha256:483d60585ce3ee71929cea70949059f83850fa5e12deb9c094ed1c8c2ec73cbd",
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+ "sha256:64b0d62e4209170a2a0c404c446ab83b941a0003e96604d2e4f4cb735f8a2254",
+ "sha256:68010900898fdf139ac08549c4dba8206c584070a960ffc530aebf0c6f2794ef",
+ "sha256:872ecb066de602a0099db98bd9e57f4cfc1d62f6093d94460c787737aa08f39e",
+ "sha256:88a32b03f2e4cd0e63f154cac76724709f40b3fc2f30139eb5d6f900521b44ed",
+ "sha256:b1dc7683da4e67ab2bebf266afa68098d681ae02ce570f0d1117312273d2b2ac",
+ "sha256:b29e27ce9371810250cb1528a771d047a9c7b0f79630dc7dc5815ff828f4273b",
+ "sha256:ce197559596370d985f1ce6b7051b52126849d8159040293bf8b98cb2b3e1f78",
+ "sha256:d45cf6daaf22584eff2175f48f82c4aa24d8e72a44913c5aff801819bb73d11f",
+ "sha256:e2ff9496322b2ce947ba4a7a5eb048158de9d6f3fe9efce29f1e8dd6878561e6",
+ "sha256:f7b979518ec1f294a41a707c007d54d0f3b3e1fd15d5b26b7e99b62b10d9a72e",
+ "sha256:f9c7268e9d16e34e50f8246c4f24cf7353764affd2bc971f0379514c246e3f6b",
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+ "version": "==4.3.2"
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+ "sha256:ade5e387d2ad0d7ebf59146cc00c8044acbd863725f887353a10df825fc8ae21",
+ "sha256:b00c1de48212e4cc9603895652c5c410df699856a2853135b3967591e4beebc2",
+ "sha256:b1282f8c00509d99fef04d8ba936b156d419be841854fe901d8ae224c59f0be5",
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+ "sha256:ba59edeaa2fc6114428f1637ffff42da1e311e29382d81b339c1817d37ec93c6",
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+ "sha256:e249096428b3ae81b08327a63a485ad0878de3fb939049038579ac0ef61e17e7"
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+ "version": "==1.1.1"
},
"pycparser": {
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@@ -308,11 +320,11 @@
},
"python-dateutil": {
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- "sha256:063df5763652e21de43de7d9e00ccf239f953a832941e37be541614732cdfc93",
- "sha256:88f9287c0174266bb0d8cedd395cfba9c58e87e5ad86b2ce58859bc11be3cf02"
+ "sha256:7e6584c74aeed623791615e26efd690f29817a27c73085b78e4bad02493df2fb",
+ "sha256:c89805f6f4d64db21ed966fda138f8a5ed7a4fdbc1a8ee329ce1b74e3c74da9e"
],
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- "version": "==2.7.5"
+ "version": "==2.8.0"
},
"python-dotenv": {
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@@ -363,9 +375,9 @@
},
"tabulate": {
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- "sha256:e4ca13f26d0a6be2a2915428dc21e732f1e44dad7f76d7030b2ef1ec251cf7f2"
+ "sha256:8af07a39377cee1103a5c8b3330a421c2d99b9141e9cc5ddd2e3263fea416943"
],
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+ "version": "==0.8.3"
},
"urllib3": {
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@@ -392,24 +404,24 @@
"develop": {
"astroid": {
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- "sha256:35b032003d6a863f5dcd7ec11abd5cd5893428beaa31ab164982403bcb311f22",
- "sha256:6a5d668d7dc69110de01cdf7aeec69a679ef486862a0850cc0fd5571505b6b7e"
+ "sha256:6560e1e1749f68c64a4b5dee4e091fce798d2f0d84ebe638cf0e0585a343acf4",
+ "sha256:b65db1bbaac9f9f4d190199bb8680af6f6f84fd3769a5ea883df8a91fe68b4c4"
],
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+ "version": "==2.2.5"
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- "sha256:ec9ae8adaae229e4f8446952d204a3e4b5fdd2d099f9be3aaf556120135fb3ee"
+ "sha256:03472c30eb2c5d1ba9227e4c2ca66ab8287fbfbbda3888aa93dc2e28fc6811b4",
+ "sha256:75a9445bac02d8d058d5e1fe689654ba5a6556a1dfd8ce6ec55a0ed79866cfa6"
],
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+ "version": "==1.3.0"
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- "sha256:ca4be454458f9dec299268d472aaa5a11f67a4ff70093396e1ceae9c76cf4bbb"
+ "sha256:69c0dbf2ed392de1cb5ec704444b08a5ef81680a61cb899dc08127123af36a79",
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],
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+ "version": "==19.1.0"
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@@ -420,10 +432,10 @@
},
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- "sha256:993f830721089fef441cdfeb4b2c8c9df86f0c63239f06bd025a76a7daddb033"
+ "sha256:59b7658e26ca9c7339e00f8f4636cdfe59d34fa37b9b04f6f9e9926b3cece1a5",
+ "sha256:b26104d6835d1f5e49452a26eb2ff87fe7090b89dfcaee5ea2212697e1e1d7ae"
],
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+ "version": "==2019.3.9"
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@@ -434,56 +446,56 @@
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"decorator": {
"hashes": [
- "sha256:2c51dff8ef3c447388fe5e4453d24a2bf128d3a4c32af3fabef1f01c6851ab82",
- "sha256:c39efa13fbdeb4506c476c9b3babf6a718da943dab7811c206005a4a956c080c"
+ "sha256:33cd704aea07b4c28b3eb2c97d288a06918275dac0ecebdaf1bc8a48d98adb9e",
+ "sha256:cabb249f4710888a2fc0e13e9a16c343d932033718ff62e1e9bc93a9d3a9122b"
],
- "version": "==4.3.0"
+ "version": "==4.3.2"
},
"idna": {
"hashes": [
@@ -494,11 +506,11 @@
},
"ipython": {
"hashes": [
- "sha256:6a9496209b76463f1dec126ab928919aaf1f55b38beb9219af3fe202f6bbdd12",
- "sha256:f69932b1e806b38a7818d9a1e918e5821b685715040b48e59c657b3c7961b742"
+ "sha256:06de667a9e406924f97781bda22d5d76bfb39762b678762d86a466e63f65dc39",
+ "sha256:5d3e020a6b5f29df037555e5c45ab1088d6a7cf3bd84f47e0ba501eeb0c3ec82"
],
"index": "pypi",
- "version": "==7.2.0"
+ "version": "==7.3.0"
},
"ipython-genutils": {
"hashes": [
@@ -509,18 +521,17 @@
},
"isort": {
"hashes": [
- "sha256:1153601da39a25b14ddc54955dbbacbb6b2d19135386699e2ad58517953b34af",
- "sha256:b9c40e9750f3d77e6e4d441d8b0266cf555e7cdabdcff33c4fd06366ca761ef8",
- "sha256:ec9ef8f4a9bc6f71eec99e1806bfa2de401650d996c59330782b89a5555c1497"
+ "sha256:18c796c2cd35eb1a1d3f012a214a542790a1aed95e29768bdcb9f2197eccbd0b",
+ "sha256:96151fca2c6e736503981896495d344781b60d18bfda78dc11b290c6125ebdb6"
],
- "version": "==4.3.4"
+ "version": "==4.3.15"
},
"jedi": {
"hashes": [
- "sha256:571702b5bd167911fe9036e5039ba67f820d6502832285cde8c881ab2b2149fd",
- "sha256:c8481b5e59d34a5c7c42e98f6625e633f6ef59353abea6437472c7ec2093f191"
+ "sha256:2bb0603e3506f708e792c7f4ad8fc2a7a9d9c2d292a358fbbd58da531695595b",
+ "sha256:2c6bcd9545c7d6440951b12b44d373479bf18123a401a52025cf98563fbd826c"
],
- "version": "==0.13.2"
+ "version": "==0.13.3"
},
"lazy-object-proxy": {
"hashes": [
@@ -565,18 +576,18 @@
},
"more-itertools": {
"hashes": [
- "sha256:38a936c0a6d98a38bcc2d03fdaaedaba9f412879461dd2ceff8d37564d6522e4",
- "sha256:c0a5785b1109a6bd7fac76d6837fd1feca158e54e521ccd2ae8bfe393cc9d4fc",
- "sha256:fe7a7cae1ccb57d33952113ff4fa1bc5f879963600ed74918f1236e212ee50b9"
+ "sha256:0125e8f60e9e031347105eb1682cef932f5e97d7b9a1a28d9bf00c22a5daef40",
+ "sha256:590044e3942351a1bdb1de960b739ff4ce277960f2425ad4509446dbace8d9d1"
],
- "version": "==5.0.0"
+ "markers": "python_version > '2.7'",
+ "version": "==6.0.0"
},
"parso": {
"hashes": [
- "sha256:4b8f9ed80c3a4a3191aa3261505d868aa552dd25649cb13a7d73b6b7315edf2d",
- "sha256:5a120be2e8863993b597f1c0437efca799e90e0793c98ae5d4e34ebd00140e31"
+ "sha256:4580328ae3f548b358f4901e38c0578229186835f0fa0846e47369796dd5bcc9",
+ "sha256:68406ebd7eafe17f8e40e15a84b56848eccbf27d7c1feb89e93d8fca395706db"
],
- "version": "==0.3.2"
+ "version": "==0.3.4"
},
"pathlib2": {
"hashes": [
@@ -610,18 +621,18 @@
},
"pluggy": {
"hashes": [
- "sha256:8ddc32f03971bfdf900a81961a48ccf2fb677cf7715108f85295c67405798616",
- "sha256:980710797ff6a041e9a73a5787804f848996ecaa6f8a1b1e08224a5894f2074a"
+ "sha256:19ecf9ce9db2fce065a7a0586e07cfb4ac8614fe96edf628a264b1c70116cf8f",
+ "sha256:84d306a647cc805219916e62aab89caa97a33a1dd8c342e87a37f91073cd4746"
],
- "version": "==0.8.1"
+ "version": "==0.9.0"
},
"prompt-toolkit": {
"hashes": [
- "sha256:c1d6aff5252ab2ef391c2fe498ed8c088066f66bc64a8d5c095bbf795d9fec34",
- "sha256:d4c47f79b635a0e70b84fdb97ebd9a274203706b1ee5ed44c10da62755cf3ec9",
- "sha256:fd17048d8335c1e6d5ee403c3569953ba3eb8555d710bfc548faf0712666ea39"
+ "sha256:11adf3389a996a6d45cc277580d0d53e8a5afd281d0c9ec71b28e6f121463780",
+ "sha256:2519ad1d8038fd5fc8e770362237ad0364d16a7650fb5724af6997ed5515e3c1",
+ "sha256:977c6583ae813a37dc1c2e1b715892461fcbdaa57f6fc62f33a528c4886c8f55"
],
- "version": "==2.0.7"
+ "version": "==2.0.9"
},
"psycopg2": {
"hashes": [
@@ -667,10 +678,10 @@
},
"py": {
"hashes": [
- "sha256:bf92637198836372b520efcba9e020c330123be8ce527e535d185ed4b6f45694",
- "sha256:e76826342cefe3c3d5f7e8ee4316b80d1dd8a300781612ddbc765c17ba25a6c6"
+ "sha256:64f65755aee5b381cea27766a3a147c3f15b9b6b9ac88676de66ba2ae36793fa",
+ "sha256:dc639b046a6e2cff5bbe40194ad65936d6ba360b52b3c3fe1d08a82dd50b5e53"
],
- "version": "==1.7.0"
+ "version": "==1.8.0"
},
"pygments": {
"hashes": [
@@ -681,19 +692,19 @@
},
"pylint": {
"hashes": [
- "sha256:689de29ae747642ab230c6d37be2b969bf75663176658851f456619aacf27492",
- "sha256:771467c434d0d9f081741fec1d64dfb011ed26e65e12a28fe06ca2f61c4d556c"
+ "sha256:5d77031694a5fb97ea95e828c8d10fc770a1df6eb3906067aaed42201a8a6a09",
+ "sha256:723e3db49555abaf9bf79dc474c6b9e2935ad82230b10c1138a71ea41ac0fff1"
],
"index": "pypi",
- "version": "==2.2.2"
+ "version": "==2.3.1"
},
"pytest": {
"hashes": [
- "sha256:41568ea7ecb4a68d7f63837cf65b92ce8d0105e43196ff2b26622995bb3dc4b2",
- "sha256:c3c573a29d7c9547fb90217ece8a8843aa0c1328a797e200290dc3d0b4b823be"
+ "sha256:067a1d4bf827ffdd56ad21bd46674703fce77c5957f6c1eef731f6146bfcef1c",
+ "sha256:9687049d53695ad45cf5fdc7bbd51f0c49f1ea3ecfc4b7f3fde7501b541f17f4"
],
"index": "pypi",
- "version": "==4.1.1"
+ "version": "==4.3.0"
},
"pytest-cov": {
"hashes": [
@@ -742,30 +753,28 @@
},
"typed-ast": {
"hashes": [
- "sha256:023625bfa9359e29bd6e24cac2a4503495b49761d48a5f1e38333fc4ac4d93fe",
- "sha256:07591f7a5fdff50e2e566c4c1e9df545c75d21e27d98d18cb405727ed0ef329c",
- "sha256:153e526b0f4ffbfada72d0bb5ffe8574ba02803d2f3a9c605c8cf99dfedd72a2",
- "sha256:3ad2bdcd46a4a1518d7376e9f5016d17718a9ed3c6a3f09203d832f6c165de4a",
- "sha256:3ea98c84df53ada97ee1c5159bb3bc784bd734231235a1ede14c8ae0775049f7",
- "sha256:51a7141ccd076fa561af107cfb7a8b6d06a008d92451a1ac7e73149d18e9a827",
- "sha256:52c93cd10e6c24e7ac97e8615da9f224fd75c61770515cb323316c30830ddb33",
- "sha256:6344c84baeda3d7b33e157f0b292e4dd53d05ddb57a63f738178c01cac4635c9",
- "sha256:64699ca1b3bd5070bdeb043e6d43bc1d0cebe08008548f4a6bee782b0ecce032",
- "sha256:74903f2e56bbffe29282ef8a5487d207d10be0f8513b41aff787d954a4cf91c9",
- "sha256:7891710dba83c29ee2bd51ecaa82f60f6bede40271af781110c08be134207bf2",
- "sha256:91976c56224e26c256a0de0f76d2004ab885a29423737684b4f7ebdd2f46dde2",
- "sha256:9bad678a576ecc71f25eba9f1e3fd8d01c28c12a2834850b458428b3e855f062",
- "sha256:b4726339a4c180a8b6ad9d8b50d2b6dc247e1b79b38fe2290549c98e82e4fd15",
- "sha256:ba36f6aa3f8933edf94ea35826daf92cbb3ec248b89eccdc053d4a815d285357",
- "sha256:bbc96bde544fd19e9ef168e4dfa5c3dfe704bfa78128fa76f361d64d6b0f731a",
- "sha256:c0c927f1e44469056f7f2dada266c79b577da378bbde3f6d2ada726d131e4824",
- "sha256:c0f9a3708008aa59f560fa1bd22385e05b79b8e38e0721a15a8402b089243442",
- "sha256:f0bf6f36ff9c5643004171f11d2fdc745aa3953c5aacf2536a0685db9ceb3fb1",
- "sha256:f5be39a0146be663cbf210a4d95c3c58b2d7df7b043c9047c5448e358f0550a2",
- "sha256:fcd198bf19d9213e5cbf2cde2b9ef20a9856e716f76f9476157f90ae6de06cc6"
- ],
- "markers": "python_version < '3.7' and implementation_name == 'cpython'",
- "version": "==1.2.0"
+ "sha256:035a54ede6ce1380599b2ce57844c6554666522e376bd111eb940fbc7c3dad23",
+ "sha256:037c35f2741ce3a9ac0d55abfcd119133cbd821fffa4461397718287092d9d15",
+ "sha256:049feae7e9f180b64efacbdc36b3af64a00393a47be22fa9cb6794e68d4e73d3",
+ "sha256:19228f7940beafc1ba21a6e8e070e0b0bfd1457902a3a81709762b8b9039b88d",
+ "sha256:2ea681e91e3550a30c2265d2916f40a5f5d89b59469a20f3bad7d07adee0f7a6",
+ "sha256:3a6b0a78af298d82323660df5497bcea0f0a4a25a0b003afd0ce5af049bd1f60",
+ "sha256:5385da8f3b801014504df0852bf83524599df890387a3c2b17b7caa3d78b1773",
+ "sha256:606d8afa07eef77280c2bf84335e24390055b478392e1975f96286d99d0cb424",
+ "sha256:69245b5b23bbf7fb242c9f8f08493e9ecd7711f063259aefffaeb90595d62287",
+ "sha256:6f6d839ab09830d59b7fa8fb6917023d8cb5498ee1f1dbd82d37db78eb76bc99",
+ "sha256:730888475f5ac0e37c1de4bd05eeb799fdb742697867f524dc8a4cd74bcecc23",
+ "sha256:9819b5162ffc121b9e334923c685b0d0826154e41dfe70b2ede2ce29034c71d8",
+ "sha256:9e60ef9426efab601dd9aa120e4ff560f4461cf8442e9c0a2b92548d52800699",
+ "sha256:af5fbdde0690c7da68e841d7fc2632345d570768ea7406a9434446d7b33b0ee1",
+ "sha256:b64efdbdf3bbb1377562c179f167f3bf301251411eb5ac77dec6b7d32bcda463",
+ "sha256:bac5f444c118aeb456fac1b0b5d14c6a71ea2a42069b09c176f75e9bd4c186f6",
+ "sha256:bda9068aafb73859491e13b99b682bd299c1b5fd50644d697533775828a28ee0",
+ "sha256:d659517ca116e6750101a1326107d3479028c5191f0ecee3c7203c50f5b915b0",
+ "sha256:eddd3fb1f3e0f82e5915a899285a39ee34ce18fd25d89582bc89fc9fb16cd2c6"
+ ],
+ "markers": "implementation_name == 'cpython'",
+ "version": "==1.3.1"
},
"urllib3": {
"hashes": [
diff --git a/python/fatcat_export.py b/python/fatcat_export.py
index 33e23202..a9d46142 100755
--- a/python/fatcat_export.py
+++ b/python/fatcat_export.py
@@ -10,12 +10,19 @@ without permission by an third party.
import sys
import json
import argparse
+
+from citeproc import CitationStylesStyle, CitationStylesBibliography
+from citeproc import Citation, CitationItem
+from citeproc import formatter
+from citeproc.source.json import CiteProcJSON
+from citeproc_styles import get_style_filepath
+
import fatcat_client
from fatcat_client.rest import ApiException
from fatcat_client import ReleaseEntity, ContainerEntity, ChangelogEntry
from fatcat_tools import uuid2fcid, entity_from_json, entity_to_dict, \
release_to_elasticsearch, container_to_elasticsearch, \
- changelog_to_elasticsearch, public_api
+ changelog_to_elasticsearch, public_api, release_to_csl
def run_export_releases(args):
@@ -52,6 +59,43 @@ def run_transform_changelogs(args):
args.json_output.write(
json.dumps(changelog_to_elasticsearch(entity)) + '\n')
+def run_citeproc_releases(args):
+ for line in args.json_input:
+ line = line.strip()
+ if not line:
+ continue
+ entity = entity_from_json(line, ReleaseEntity, api_client=args.api.api_client)
+ csl_json = release_to_csl(entity)
+ # XXX:
+ csl_json['id'] = "release:" + (entity.ident or "unknown")
+ if args.style == "csl-json":
+ args.json_output.write(json.dumps(csl_json) + "\n")
+ continue
+ bib_src = CiteProcJSON([csl_json])
+ form = formatter.plain
+ if args.html:
+ form = formatter.html
+ style_path = get_style_filepath(args.style)
+ bib_style = CitationStylesStyle(style_path, validate=False)
+ bib = CitationStylesBibliography(bib_style, bib_src, form)
+ bib.register(Citation([CitationItem(csl_json['id'])]))
+ # XXX:
+ #args.json_output.write(
+ # json.dumps(release_to_csl(entity)) + '\n')
+ lines = bib.bibliography()[0]
+ if args.style == "bibtex":
+ for l in lines:
+ if l.startswith(" @"):
+ args.json_output.write("\n@")
+ elif l.startswith(" "):
+ #print("line: START|{}|END".format(l))
+ args.json_output.write("\n " + l)
+ else:
+ args.json_output.write(l)
+ else:
+ args.json_output.write(''.join(lines) + "\n")
+ print()
+
def run_export_changelog(args):
end = args.end
if end is None:
@@ -109,6 +153,21 @@ def main():
help="where to send output",
default=sys.stdout, type=argparse.FileType('w'))
+ sub_citeproc_releases = subparsers.add_parser('citeproc-releases')
+ sub_citeproc_releases.set_defaults(func=run_citeproc_releases)
+ sub_citeproc_releases.add_argument('json_input',
+ help="JSON-per-line of release entities",
+ default=sys.stdin, type=argparse.FileType('r'))
+ sub_citeproc_releases.add_argument('json_output',
+ help="where to send output",
+ default=sys.stdout, type=argparse.FileType('w'))
+ sub_citeproc_releases.add_argument('--style',
+ help="citation style to output",
+ default='csl-json')
+ sub_citeproc_releases.add_argument('--html',
+ action='store_true',
+ help="output HTML, not plain text")
+
sub_changelog = subparsers.add_parser('changelog')
sub_changelog.set_defaults(func=run_export_changelog)
sub_changelog.add_argument('--start',
diff --git a/python/fatcat_tools/__init__.py b/python/fatcat_tools/__init__.py
index 64c45062..c72ccd47 100644
--- a/python/fatcat_tools/__init__.py
+++ b/python/fatcat_tools/__init__.py
@@ -3,4 +3,4 @@ from .api_auth import authenticated_api, public_api
from .fcid import fcid2uuid, uuid2fcid
from .transforms import entity_to_dict, entity_from_json, \
release_to_elasticsearch, container_to_elasticsearch, \
- changelog_to_elasticsearch
+ changelog_to_elasticsearch, release_to_csl
diff --git a/python/fatcat_tools/transforms.py b/python/fatcat_tools/transforms.py
index 0e5afd6a..f49b5ac9 100644
--- a/python/fatcat_tools/transforms.py
+++ b/python/fatcat_tools/transforms.py
@@ -319,6 +319,171 @@ def container_to_elasticsearch(entity, force_bool=True):
return t
+def contribs_by_role(contribs, role):
+ ret = [c.copy() for c in contribs if c['role'] == role]
+ [c.pop('role') for c in ret]
+ # XXX:
+ [c.pop('literal') for c in ret]
+ if not ret:
+ return None
+ else:
+ return ret
+
+
+def release_to_csl(entity):
+ """
+ Returns a python dict which can be json.dumps() to get a CSL-JSON (aka,
+ citeproc-JSON, aka Citation Style Language JSON)
+
+ This function will likely become an API method/endpoint
+
+ Follows, but not enforced by: https://github.com/citation-style-language/schema/blob/master/csl-data.json
+ """
+ contribs = []
+ for contrib in (entity.contribs or []):
+ if contrib.creator:
+ # TODO: should we actually be pulling creator metadata? or just
+ # using release-local raw metadata?
+ c = dict(
+ family=contrib.creator.surname,
+ given=contrib.creator.given_name,
+ #dropping-particle
+ #non-dropping-particle
+ #suffix
+ #comma-suffix
+ #static-ordering
+ literal=contrib.raw_name, # or display_name?
+ #parse-names,
+ role=contrib.role,
+ )
+ else:
+ c = dict(
+ # XXX: possible inclusion of full name metadata in release_contrib
+ family=contrib.raw_name.split()[-1],
+ literal=contrib.raw_name,
+ role=contrib.role,
+ )
+ for k in list(c.keys()):
+ if not c[k]:
+ c.pop(k)
+ contribs.append(c)
+ abstract = None
+ if entity.abstracts:
+ abstract = entity.abstracts[0].content
+
+ issued_date = None
+ if entity.release_date:
+ issued_date = {"date-parts": [[
+ entity.release_date.year,
+ entity.release_date.month,
+ entity.release_date.day,
+ ]]}
+ elif entity.release_year:
+ issued_date = {"date-parts": [[entity.release_year]]}
+
+ csl = dict(
+ #id,
+ #categories
+ type=entity.release_type or "article", # XXX: can't be blank
+ language=entity.language,
+ #journalAbbreviation
+ #shortTitle
+ ## see below for all contrib roles
+ #accessed
+ #container
+ #event-date
+ issued=issued_date,
+ #original-date
+ #submitted
+ abstract=abstract,
+ #annote
+ #archive
+ #archive_location
+ #archive-place
+ #authority
+ #call-number
+ #chapter-number
+ #citation-number
+ #citation-label
+ #collection-number
+ #collection-title
+ container_title=entity.container and entity.container.name,
+ #container-title-short
+ #dimensions
+ DOI=entity.doi,
+ #edition
+ #event
+ #event-place
+ #first-reference-note-number
+ #genre
+ ISBN=entity.isbn13,
+ ISSN=entity.container and entity.container.issnl,
+ issue=entity.issue,
+ #jurisdiction
+ #keyword
+ #locator
+ #medium
+ #note
+ #number
+ #number-of-pages
+ #number-of-volumes
+ #original-publisher
+ #original-publisher-place
+ #original-title
+ # XXX: page=entity.pages,
+ page_first=entity.pages.split('-')[0],
+ PMCID=entity.pmcid,
+ PMID=entity.pmid,
+ publisher=(entity.container and entity.container.publisher) or entity.publisher,
+ #publisher-place
+ #references
+ #reviewed-title
+ #scale
+ #section
+ #source
+ #status
+ title=entity.title,
+ #title-short
+ #URL
+ #version
+ volume=entity.volume,
+ #year-suffix
+ )
+ for role in ['author', 'collection-editor', 'composer', 'container-author',
+ 'director', 'editor', 'editorial-director', 'interviewer',
+ 'illustrator', 'original-author', 'recipient', 'reviewed-author',
+ 'translator']:
+ cbr = contribs_by_role(contribs, role)
+ if cbr:
+ csl[role] = cbr
+ # underline-to-dash
+ csl['container-title'] = csl.pop('container_title')
+ csl['page-first'] = csl.pop('page_first')
+ empty_keys = [k for k,v in csl.items() if not v]
+ for k in empty_keys:
+ csl.pop(k)
+ return csl
+
+
+def refs_to_csl(entity):
+ ret = []
+ for ref in entity.refs:
+ if ref.release_id and False:
+ # TODO: fetch full entity from API and convert with release_to_csl
+ raise NotImplementedError
+ else:
+ issued_date = None
+ if ref.year:
+ issued_date = [[ref.year]]
+ csl = dict(
+ title=ref.title,
+ issued=issued_date,
+ )
+ csl['id'] = ref.key or ref.index, # zero- or one-indexed?
+ ret.append(csl)
+ return ret
+
+
def changelog_to_elasticsearch(entity):
editgroup = entity.editgroup