diff options
Diffstat (limited to 'python/fatcat_web/ref_routes.py')
| -rw-r--r-- | python/fatcat_web/ref_routes.py | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/python/fatcat_web/ref_routes.py b/python/fatcat_web/ref_routes.py index a49813c4..dc39299f 100644 --- a/python/fatcat_web/ref_routes.py +++ b/python/fatcat_web/ref_routes.py @@ -8,8 +8,11 @@ from typing import Optional from flask import render_template, abort, redirect, request from fatcat_openapi_client import * from fatcat_openapi_client.rest import ApiException +from fuzzycat.grobid_unstructured import grobid_api_process_citation, transform_grobid_ref_xml, grobid_ref_to_release +from fuzzycat.simple import close_fuzzy_biblio_matches, close_fuzzy_release_matches from fatcat_tools.references import enrich_inbound_refs_fatcat, enrich_outbound_refs_fatcat, get_inbound_refs, get_outbound_refs +from fatcat_tools.transforms.access import release_access_options from fatcat_web import app, api, auth_api from fatcat_web.forms import * from fatcat_web.entity_helpers import * @@ -48,3 +51,46 @@ def release_view_refs_outbound(ident): enriched_refs = enrich_outbound_refs_fatcat(hits.result_refs, fatcat_api_client=api, expand="container,files,webcaptures") return render_template('release_view_fuzzy_refs.html', direction="outbound", entity=release, hits=hits, enriched_refs=enriched_refs), 200 + +@app.route('/reference/match', methods=['GET', 'POST']) +def reference_match(): + + form = ReferenceMatchForm() + grobid_status = None + grobid_dict = None + + if form.is_submitted(): + if form.validate_on_submit(): + if form.submit_type.data == 'parse': + resp_xml = grobid_api_process_citation(form.raw_citation.data) + if not resp_xml: + grobid_status = "failed" + return render_template('reference_match.html', form=form, grobid_status=grobid_status), 400 + grobid_dict = transform_grobid_ref_xml(resp_xml) + if not grobid_dict: + grobid_status = "empty" + return render_template('reference_match.html', form=form, grobid_status=grobid_status), 200 + #print(grobid_dict) + release_stub = grobid_ref_to_release(grobid_dict) + # remove empty values from GROBID parsed dict + grobid_dict = {k: v for k, v in grobid_dict.items() if v is not None} + form = ReferenceMatchForm.from_grobid_parse(grobid_dict, form.raw_citation.data) + grobid_status = "success" + matches = close_fuzzy_release_matches(es_client=app.es_client, release=release_stub, match_limit=10) or [] + elif form.submit_type.data == 'match': + matches = close_fuzzy_biblio_matches(es_client=app.es_client, biblio=form.data, match_limit=10) or [] + else: + raise NotImplementedError() + + for m in matches: + # expand releases more completely + m.release = api.get_release(m.release.ident, expand="container,files,filesets,webcaptures", hide="abstract,refs") + # hack in access options + m.access_options = release_access_options(m.release) + + return render_template('reference_match.html', form=form, grobid_dict=grobid_dict, grobid_status=grobid_status, matches=matches), 200 + + elif form.errors: + return render_template('reference_match.html', form=form), 400 + + return render_template('reference_match.html', form=form), 200 |