diff options
Diffstat (limited to 'python/fatcat_tools/importers/datacite.py')
| -rw-r--r-- | python/fatcat_tools/importers/datacite.py | 65 |
1 files changed, 51 insertions, 14 deletions
diff --git a/python/fatcat_tools/importers/datacite.py b/python/fatcat_tools/importers/datacite.py index 00ce9ccd..0481337a 100644 --- a/python/fatcat_tools/importers/datacite.py +++ b/python/fatcat_tools/importers/datacite.py @@ -478,20 +478,7 @@ class DataciteImporter(EntityImporter): license_slug = slug license_extra.append(lic) - # Release type. Try to determine the release type from a variety of - # types supplied in datacite. The "attributes.types.resourceType" is - # uncontrolled (170000+ unique values, from "null", "Dataset" to - # "Jupyter Notebook" and "Macroseismic Data Points" or "2 days of IP - # flows in 2009") citeproc may be the closest, but not always supplied. - # Order lookup roughly by completeness of mapping. - for typeType in ('citeproc', 'ris', 'schemaOrg', 'bibtex', 'resourceTypeGeneral'): - value = attributes.get('types', {}).get(typeType) - release_type = DATACITE_TYPE_MAP.get(typeType, {}).get(value) - if release_type is not None: - break - - if release_type is None: - print("[{}] no mapped type: {}".format(doi, value), file=sys.stderr) + release_type = self.datacite_release_type(doi, attributes) # Language values are varied ("ger", "es", "English", "ENG", "en-us", # "other", ...). Try to crush it with langcodes: "It may sound to you @@ -682,6 +669,38 @@ class DataciteImporter(EntityImporter): return re @staticmethod + def datacite_release_type(doi, attributes): + """ + Release type. Try to determine the release type from a variety of types + supplied in datacite. The "attributes.types.resourceType" is + uncontrolled (170000+ unique values, from "null", "Dataset" to "Jupyter + Notebook" and "Macroseismic Data Points" or "2 days of IP flows in + 2009") citeproc may be the closest, but not always supplied. Order + lookup roughly by completeness of mapping. + """ + + release_type = None + if not attributes.get('types'): + return None + types = attributes['types'] + + for typeType in ('citeproc', 'ris', 'schemaOrg', 'bibtex', 'resourceTypeGeneral'): + value = types.get(typeType) + release_type = DATACITE_TYPE_MAP.get(typeType, {}).get(value) + if release_type is not None: + break + + # special case: figshare "collections" which group other entities + if doi.startswith('10.6084/') or doi.startswith('10.25384'): + if types.get('resourceType') == "Collection": + release_type = "stub" + + if release_type is None: + print("[{}] no mapped type: {}".format(doi, types), file=sys.stderr) + + return release_type + + @staticmethod def biblio_hacks(re): """ This function handles known special cases. For example, @@ -707,6 +726,24 @@ class DataciteImporter(EntityImporter): if re.title.lower().startswith('additional file') and re.release_type in ('article', 'article-journal'): re.release_type = 'component' + # figshare + if re.ext_ids.doi.startswith('10.6084/') or re.ext_ids.doi.startswith('10.25384'): + # set version if DOI ends with versioned suffix + doi_suffix = re.ext_ids.doi.split('.') + if doi_suffix and doi_suffix.startswith('v') and doi_suffix[1:].isdigit(): + re.version = doi_suffix + # "Figure 123 from " -> component + # "Table S1. ;Figure S1;Figure S2. ;Figure S3. ;Figure S4. from Use of organic exudates from two polar diatoms by bacterial isolates from the Arctic ocean" + if " from " in re.title and re.release_type not in ('stub', 'graphic'): + if re.title.startswith("Figure "): + re.release_type = "component" + elif re.title.startswith("Table "): + re.release_type = "component" + + # figshare.com + if re.ext_ids.doi.startswith('10.6084/m9.figshare.') and re.container_name is None: + re.container_name = "figshare.com" + return re def try_update(self, re): |