fixes for grobid metadata importer

2 files changed, 16 insertions, 1 deletions

diff --git a/python/fatcat/importer_common.py b/python/fatcat/importer_common.py
index 95bec8a1..8dfee875 100644
--- a/python/fatcat/importer_common.py
+++ b/python/fatcat/importer_common.py
@@ -41,7 +41,7 @@ class FatcatImporter:
         for i, row in enumerate(source):
             self.create_row(row, editgroup=eg.id)
             if i > 0 and (i % group_size) == 0:
-                self.api.accept_editgroup(eg)
+                self.api.accept_editgroup(eg.id)
                 eg = self.api.create_editgroup(
                     fatcat_client.Editgroup(editor_id='aaaaaaaaaaaabkvkaaaaaaaaae'))
             self.processed_lines = self.processed_lines + 1
diff --git a/python/fatcat_import.py b/python/fatcat_import.py
index c799dcd3..ce232e31 100755
--- a/python/fatcat_import.py
+++ b/python/fatcat_import.py
@@ -7,6 +7,7 @@ from fatcat.crossref_importer import FatcatCrossrefImporter
 from fatcat.orcid_importer import FatcatOrcidImporter
 from fatcat.issn_importer import FatcatIssnImporter
 from fatcat.matched_importer import FatcatMatchedImporter
+from fatcat.grobid_metadata_importer import FatcatGrobidMetadataImporter
 
 def run_import_crossref(args):
     fci = FatcatCrossrefImporter(args.host_url, args.issn_map_file,
@@ -30,6 +31,11 @@ def run_import_matched(args):
     fmi.process_batch(args.json_file, size=args.batch_size)
     fmi.describe_run()
 
+def run_import_grobid_metadata(args):
+    fmi = FatcatGrobidMetadataImporter(args.host_url)
+    fmi.process_source(args.tsv_file, group_size=args.group_size)
+    fmi.describe_run()
+
 def health(args):
     rfac = RawFatcatApiClient(args.host_url)
     print(rfac.health())
@@ -92,6 +98,15 @@ def main():
         help="size of batch to send",
         default=50, type=int)
 
+    sub_import_grobid_metadata = subparsers.add_parser('import-grobid-metadata')
+    sub_import_grobid_metadata.set_defaults(func=run_import_grobid_metadata)
+    sub_import_grobid_metadata.add_argument('tsv_file',
+        help="TSV file to import from (or stdin)",
+        default=sys.stdin, type=argparse.FileType('r'))
+    sub_import_grobid_metadata.add_argument('--group-size',
+        help="editgroup group size to use",
+        default=75, type=int)
+
     sub_health = subparsers.add_parser('health')
     sub_health.set_defaults(func=health)