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| author | Bryan Newbold <bnewbold@robocracy.org> | 2019-12-23 18:55:35 -0800 |
|---|---|---|
| committer | Bryan Newbold <bnewbold@robocracy.org> | 2019-12-23 18:56:53 -0800 |
| commit | 19bbc2f1959f19b8ec8e7f0609442d67509e49a8 (patch) | |
| tree | 7fb161badc310faffe432681ef083a9727aff90c /python | |
| parent | dcb43953784db9a8068e5c51d4499592a49f2ea8 (diff) | |
| download | fatcat-19bbc2f1959f19b8ec8e7f0609442d67509e49a8.tar.gz fatcat-19bbc2f1959f19b8ec8e7f0609442d67509e49a8.zip | |
pubmed: if doing update, also do subtitle schema update
Diffstat (limited to 'python')
| -rw-r--r-- | python/fatcat_tools/importers/pubmed.py | 10 |
1 files changed, 9 insertions, 1 deletions
diff --git a/python/fatcat_tools/importers/pubmed.py b/python/fatcat_tools/importers/pubmed.py index 8019e36a..3611a299 100644 --- a/python/fatcat_tools/importers/pubmed.py +++ b/python/fatcat_tools/importers/pubmed.py @@ -647,7 +647,6 @@ class PubmedImporter(EntityImporter): # extra: # translation_of - # subtitle # aliases # container_name # group-title @@ -728,6 +727,15 @@ class PubmedImporter(EntityImporter): existing.ext_ids.pmcid = existing.ext_ids.pmcid or re.ext_ids.pmcid existing.refs = existing.refs or re.refs existing.extra['pubmed'] = re.extra['pubmed'] + # update subtitle in-place first + if not existing.subtitle and existing.extra.get('subtitle'): + subtitle = existing.extra.pop('subtitle') + if type(subtitle) == list: + subtitle = subtitle[0] + if subtitle: + existing.subtitle = subtitle + if not existing.subtitle: + existing.subtitle = re.subtitle try: self.api.update_release(self.get_editgroup_id(), existing.ident, existing) self.counts['update'] += 1 |