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authorBryan Newbold <bnewbold@robocracy.org>2020-01-17 17:47:11 -0800
committerBryan Newbold <bnewbold@robocracy.org>2020-01-17 17:48:00 -0800
commit96123dfc554f7959a5c7008b9eebf7bbec37c437 (patch)
treebbb32ab62361dfb92f9842f2d009b4af39cb92e8 /python
parent41c096a435d04dfbb6705542fb3565ac951acae9 (diff)
downloadfatcat-96123dfc554f7959a5c7008b9eebf7bbec37c437.tar.gz
fatcat-96123dfc554f7959a5c7008b9eebf7bbec37c437.zip
actually control pubmed updates with a flag
Diffstat (limited to 'python')
-rwxr-xr-xpython/fatcat_import.py4
1 files changed, 4 insertions, 0 deletions
diff --git a/python/fatcat_import.py b/python/fatcat_import.py
index 5b97d3a8..07bb83a9 100755
--- a/python/fatcat_import.py
+++ b/python/fatcat_import.py
@@ -42,6 +42,7 @@ def run_pubmed(args):
pi = PubmedImporter(args.api,
args.issn_map_file,
edit_batch_size=args.batch_size,
+ do_updates=args.do_updates)
lookup_refs=(not args.no_lookup_refs))
if args.kafka_mode:
raise NotImplementedError
@@ -276,6 +277,9 @@ def main():
sub_pubmed.add_argument('--no-lookup-refs',
action='store_true',
help="skip lookup of references (PMID or DOI)")
+ sub_pubmed.add_argument('--do-updates',
+ action='store_true',
+ help="update pre-existing release entities")
sub_pubmed.add_argument('--kafka-mode',
action='store_true',
help="consume from kafka topic (not stdin)")