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authorBryan Newbold <bnewbold@robocracy.org>2020-12-17 01:55:30 -0800
committerBryan Newbold <bnewbold@robocracy.org>2020-12-17 23:03:08 -0800
commit58ff361eb481bee9d2ef7249f48f94729d2a830d (patch)
tree9cbcbcf1c7eafa958c81d18fcf5b6a5d27f2f42d /python/tests
parentb2f53077bd05a536b5fdb551755a559b653421d3 (diff)
downloadfatcat-58ff361eb481bee9d2ef7249f48f94729d2a830d.tar.gz
fatcat-58ff361eb481bee9d2ef7249f48f94729d2a830d.zip
very simple dblp container importer
Diffstat (limited to 'python/tests')
-rw-r--r--python/tests/files/ISSN-to-ISSN-L.snip.txt1
-rw-r--r--python/tests/files/dblp_container_map.tsv10
-rw-r--r--python/tests/files/example_dblp_containers.json10
-rw-r--r--python/tests/import_dblp.py61
4 files changed, 77 insertions, 5 deletions
diff --git a/python/tests/files/ISSN-to-ISSN-L.snip.txt b/python/tests/files/ISSN-to-ISSN-L.snip.txt
index c97de279..2569c443 100644
--- a/python/tests/files/ISSN-to-ISSN-L.snip.txt
+++ b/python/tests/files/ISSN-to-ISSN-L.snip.txt
@@ -8,3 +8,4 @@ ISSN ISSN-L
0000-0094 0002-0094
0000-0108 0002-0108
0000-0140 0002-0140
+1877-3273 1877-3273
diff --git a/python/tests/files/dblp_container_map.tsv b/python/tests/files/dblp_container_map.tsv
new file mode 100644
index 00000000..5f3dbacd
--- /dev/null
+++ b/python/tests/files/dblp_container_map.tsv
@@ -0,0 +1,10 @@
+dblp_prefix container_id
+series/atlantis 7xuzjpmxqnaq7enf3qc45diflu
+series/apc ktlimnolmvbwbhthlj66zuooea
+series/swb s2qx5lvrdngvrk6y2arrem3qom
+series/sbece 7g52v6peqrek5l7zmstisnpkdm
+series/wssris iszwbitlzfau5k77dpqifz5tf4
+series/lnm r436k67l3fdm5cgs5hqif5e7hi
+conf/focs aaaaaaaaaaaaaeiraaaaaaaaai
+conf/er aaaaaaaaaaaaaeiraaaaaaaaai
+journals/cacm aaaaaaaaaaaaaeiraaaaaaaaai
diff --git a/python/tests/files/example_dblp_containers.json b/python/tests/files/example_dblp_containers.json
new file mode 100644
index 00000000..c5137604
--- /dev/null
+++ b/python/tests/files/example_dblp_containers.json
@@ -0,0 +1,10 @@
+{"homepage_url": "http://link.springer.com/bookseries/10077", "issns": ["1877-3273"], "key": "series/atlantis", "title": "Atlantis Thinking Machines"}
+{"homepage_url": "http://ebooks.iospress.nl/bookseries/advances-in-parallel-computing", "issns": ["0927-5452", "1879-808X"], "key": "series/apc", "title": "Advances in Parallel Computing"}
+{"homepage_url": "http://link.springer.com/bookseries/7056", "issns": ["1559-7474"], "key": "series/swb", "title": "Semantic Web and Beyond: Computing for Human Experience"}
+{"homepage_url": "http://link.springer.com/bookseries/10059", "issns": ["2191-8112"], "key": "series/sbece", "title": "Springer Briefs in Electrical and Computer Engineering"}
+{"homepage_url": "http://www.worldscientific.com/series/wssris", "issns": [], "key": "series/wssris", "title": "World Scientific Series in Robotics and Intelligent Systems"}
+{"acronym": "LNM", "homepage_url": "http://link.springer.com/bookseries/304", "issns": ["0075-8434"], "key": "series/lnm", "title": "Lecture Notes in Mathematics"}
+{"homepage_url": "https://www.usenix.org/lisa", "issns": [], "key": "series/sage", "title": "Short Topics in System Administration"}
+{"homepage_url": "http://link.springer.com/bookseries/4205", "issns": ["2191-6586", "2191-6594"], "key": "series/acvpr", "title": "Advances in Computer Vision and Pattern Recognition"}
+{"acronym": "STAR", "homepage_url": "http://link.springer.com/bookseries/5208", "issns": ["1610-7438", "1610-742X"], "key": "series/star", "title": "Springer Tracts in Advanced Robotics"}
+{"acronym": "FAIA", "homepage_url": "http://ebooks.iospress.nl/bookseries/frontiers-in-artificial-intelligence-and-applications", "issns": ["0922-6389", "1879-8314"], "key": "series/faia", "title": "Frontiers in Artificial Intelligence and Applications"}
diff --git a/python/tests/import_dblp.py b/python/tests/import_dblp.py
index fd40eb06..5041b509 100644
--- a/python/tests/import_dblp.py
+++ b/python/tests/import_dblp.py
@@ -1,8 +1,9 @@
+import io
import pytest
from bs4 import BeautifulSoup
-from fatcat_tools.importers import DblpReleaseImporter, Bs4XmlLargeFilePusher
+from fatcat_tools.importers import DblpReleaseImporter, DblpContainerImporter, Bs4XmlLargeFilePusher, JsonLinePusher
from fixtures import *
@@ -13,15 +14,21 @@ def dblp_importer(api):
@pytest.fixture(scope="function")
def dblp_importer_existing(api):
- with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file:
- yield DblpReleaseImporter(api, issn_file, bezerk_mode=False, lookup_refs=True)
+ with open('tests/files/dblp_container_map.tsv', 'r') as tsv_file:
+ yield DblpReleaseImporter(api, tsv_file, bezerk_mode=False)
+
+@pytest.fixture(scope="function")
+def dblp_container_importer(api):
+ with open('tests/files/dblp_container_map.tsv', 'r') as tsv_file:
+ with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file:
+ yield DblpContainerImporter(api, issn_file, tsv_file, io.StringIO(), bezerk_mode=True)
def test_dblp_importer(dblp_importer):
last_index = dblp_importer.api.get_changelog(limit=1)[0].index
with open('tests/files/example_dblp.xml', 'rb') as f:
dblp_importer.bezerk_mode = True
counts = Bs4XmlLargeFilePusher(dblp_importer, f, dblp_importer.ELEMENT_TYPES, use_lxml=True).run()
- print(counts)
+ #print(counts)
assert counts['insert'] == 3
assert counts['exists'] == 0
assert counts['skip'] == 1
@@ -44,12 +51,56 @@ def test_dblp_importer(dblp_importer):
dblp_importer.bezerk_mode = False
dblp_importer.reset()
counts = Bs4XmlLargeFilePusher(dblp_importer, f, dblp_importer.ELEMENT_TYPES, use_lxml=True).run()
- print(counts)
+ #print(counts)
assert counts['insert'] == 0
assert counts['exists'] == 3
assert counts['skip'] == 1
assert last_index == dblp_importer.api.get_changelog(limit=1)[0].index
+def test_dblp_container_importer(dblp_container_importer):
+ last_index = dblp_container_importer.api.get_changelog(limit=1)[0].index
+ output_tsv_map = io.StringIO()
+ with open('tests/files/example_dblp_containers.json', 'r') as f:
+ dblp_container_importer.bezerk_mode = True
+ dblp_container_importer.dblp_container_map_output = output_tsv_map
+ counts = JsonLinePusher(dblp_container_importer, f).run()
+ assert counts['insert'] == 10
+ assert counts['exists'] == 0
+ assert counts['skip'] == 0
+
+ # fetch most recent editgroup
+ change = dblp_container_importer.api.get_changelog_entry(index=last_index+1)
+ eg = change.editgroup
+ assert eg.description
+ assert "dblp" in eg.description.lower()
+ assert eg.extra['git_rev']
+ assert "fatcat_tools.DblpContainerImporter" in eg.extra['agent']
+
+ # check that entity name mangling was fixed on import
+ eg = dblp_container_importer.api.get_editgroup(eg.editgroup_id)
+ container = dblp_container_importer.api.get_container(eg.edits.containers[0].ident)
+ assert container.name == "Atlantis Thinking Machines"
+ assert container.issnl == "1877-3273"
+ assert container.container_type == "book-series"
+ assert container.extra['dblp']['prefix'] == "series/atlantis"
+ assert container.extra['urls'] == ["http://link.springer.com/bookseries/10077"]
+
+ last_index = dblp_container_importer.api.get_changelog(limit=1)[0].index
+ output_tsv_map.seek(0)
+ print(output_tsv_map.read())
+ output_tsv_map.seek(0)
+ with open('tests/files/example_dblp_containers.json', 'r') as f:
+ dblp_container_importer.reset()
+ dblp_container_importer.bezerk_mode = False
+ dblp_container_importer.dblp_container_map_output = io.StringIO()
+ dblp_container_importer.read_dblp_container_map_file(output_tsv_map)
+ counts = JsonLinePusher(dblp_container_importer, f).run()
+ print(counts)
+ assert counts['insert'] == 0
+ assert counts['exists'] == 10
+ assert counts['skip'] == 0
+ assert last_index == dblp_container_importer.api.get_changelog(limit=1)[0].index
+
def test_dblp_xml_parse(dblp_importer):
with open('tests/files/example_dblp_article.xml', 'r') as f:
soup = BeautifulSoup(f, "xml")