initial flesh out of JALC parser

1 files changed, 88 insertions, 0 deletions

diff --git a/python/tests/import_jalc.py b/python/tests/import_jalc.py
new file mode 100644
index 00000000..7b25f0fa
--- /dev/null
+++ b/python/tests/import_jalc.py
@@ -0,0 +1,88 @@
+
+import json, gzip
+import pytest
+from fatcat_tools.importers import JalcImporter, Bs4XmlFilePusher
+from fixtures import api
+from bs4 import BeautifulSoup
+
+
+@pytest.fixture(scope="function")
+def jalc_importer(api):
+    with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file:
+        yield JalcImporter(api, issn_file, extid_map_file='tests/files/example_map.sqlite3', bezerk_mode=True)
+
+@pytest.fixture(scope="function")
+def jalc_importer_existing(api):
+    with open('tests/files/ISSN-to-ISSN-L.snip.txt', 'r') as issn_file:
+        yield JalcImporter(api, issn_file, extid_map_file='tests/files/example_map.sqlite3', bezerk_mode=False)
+
+def test_jalc_importer(jalc_importer):
+    last_index = jalc_importer.api.get_changelog(limit=1)[0].index
+    with open('tests/files/jalc_lod_sample.xml', 'r') as f:
+        jalc_importer.bezerk_mode = True
+        counts = Bs4XmlFilePusher(jalc_importer, f, "Description").run()
+    assert counts['insert'] == 2
+    assert counts['exists'] == 0
+    assert counts['skip'] == 0
+
+    # fetch most recent editgroup
+    change = jalc_importer.api.get_changelog_entry(index=last_index+1)
+    eg = change.editgroup
+    assert eg.description
+    assert "jalc" in eg.description.lower()
+    assert eg.extra['git_rev']
+    assert "fatcat_tools.JalcImporter" in eg.extra['agent']
+
+    last_index = jalc_importer.api.get_changelog(limit=1)[0].index
+    with open('tests/files/jalc_lod_sample.xml', 'r') as f:
+        jalc_importer.bezerk_mode = False
+        jalc_importer.reset()
+        counts = Bs4XmlFilePusher(jalc_importer, f, "Description").run()
+    assert counts['insert'] == 0
+    assert counts['exists'] == 2
+    assert counts['skip'] == 0
+    assert last_index == jalc_importer.api.get_changelog(limit=1)[0].index
+
+def test_jalc_dict_parse(jalc_importer):
+    with open('tests/files/jalc_lod_sample.xml', 'r') as f:
+        soup = BeautifulSoup(f, "xml")
+        r = jalc_importer.parse_record(soup.find_all("Description")[0])
+
+    print(r.extra)
+    assert r.title == "New carbides in the Ni-Ti-Mo-C system"
+    assert r.subtitle == None
+    assert r.original_title == "Ｎｉ－Ｔｉ－Ｍｏ－Ｃ系に出現する新炭化物相について"
+    assert r.publisher == "Japan Society of Powder and Powder Metallurgy"
+    assert r.release_type == "article-journal"
+    assert r.release_stage == "published"
+    assert r.license_slug == None
+    assert r.ext_ids.doi == "10.2497/jjspm.36.898"
+    assert r.language == "ja"
+    assert r.volume == "36"
+    assert r.issue == "8"
+    assert r.pages == "898-902"
+    assert r.release_year == 1989
+    # XXX:
+    #assert 'subtitle' not in r.extra
+    #assert 'subtitle' not in r.extra['jalc']
+    #assert 'funder' not in r.extra
+    #assert 'funder' not in r.extra['jalc']
+    # matched by ISSN, so shouldn't be in there?
+    #assert extra['container_name'] == "International Journal of Quantum Chemistry"
+    assert len(r.contribs) == 4
+
+    assert r.contribs[0].raw_name == "Hashimoto Yasuhiko"
+    assert r.contribs[0].given_name == "Yasuhiko"
+    assert r.contribs[0].surname == "Hashimoto"
+    assert r.contribs[0].extra['original_name']['raw_name'] == "橋本 雍彦"
+    assert r.contribs[0].extra['original_name']['given_name'] == "雍彦"
+    assert r.contribs[0].extra['original_name']['surname'] == "橋本"
+
+    assert r.contribs[3].raw_name == "Takahashi Teruo"
+    assert r.contribs[3].given_name == "Teruo"
+    assert r.contribs[3].surname == "Takahashi"
+    assert r.contribs[3].extra['original_name']['raw_name'] == "高橋 輝男"
+    assert r.contribs[3].extra['original_name']['given_name'] == "輝男"
+    assert r.contribs[3].extra['original_name']['surname'] == "高橋"
+
+    assert not r.refs