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authorBryan Newbold <bnewbold@robocracy.org>2019-01-22 22:04:39 -0800
committerBryan Newbold <bnewbold@robocracy.org>2019-01-22 22:04:39 -0800
commite0f70bbbcbcb6232cfb508ad5c0ae637391c4871 (patch)
tree7d7c83a04a3776754476b123d70e23dfa6cf297d /python/fatcat_tools/importers/orcid.py
parent09475b87821142c5cd36c6b90fb97deb2a058312 (diff)
downloadfatcat-e0f70bbbcbcb6232cfb508ad5c0ae637391c4871.tar.gz
fatcat-e0f70bbbcbcb6232cfb508ad5c0ae637391c4871.zip
refactor remaining importers
Diffstat (limited to 'python/fatcat_tools/importers/orcid.py')
-rw-r--r--python/fatcat_tools/importers/orcid.py45
1 files changed, 27 insertions, 18 deletions
diff --git a/python/fatcat_tools/importers/orcid.py b/python/fatcat_tools/importers/orcid.py
index d03b2855..2c39db18 100644
--- a/python/fatcat_tools/importers/orcid.py
+++ b/python/fatcat_tools/importers/orcid.py
@@ -3,7 +3,7 @@ import sys
import json
import itertools
import fatcat_client
-from .common import FatcatImporter
+from .common import EntityImporter
def value_or_none(e):
if type(e) == dict:
@@ -20,7 +20,7 @@ def value_or_none(e):
return None
return e
-class OrcidImporter(FatcatImporter):
+class OrcidImporter(EntityImporter):
def __init__(self, api, **kwargs):
@@ -32,14 +32,16 @@ class OrcidImporter(FatcatImporter):
editgroup_description=eg_desc,
editgroup_extra=eg_extra)
- def parse_orcid_dict(self, obj):
+ def want(self, raw_record):
+ return True
+
+ def parse_record(self, obj):
"""
obj is a python dict (parsed from json).
returns a CreatorEntity
"""
name = obj['person']['name']
- if name is None:
- return None
+ assert name
extra = None
given = value_or_none(name.get('given-names'))
sur = value_or_none(name.get('family-name'))
@@ -67,17 +69,24 @@ class OrcidImporter(FatcatImporter):
extra=extra)
return ce
- def create_row(self, row, editgroup_id=None):
- obj = json.loads(row)
- ce = self.parse_orcid_dict(obj)
- if ce is not None:
- self.api.create_creator(ce, editgroup_id=editgroup_id)
- self.counts['insert'] += 1
+ def try_update(self, raw_record):
+ existing = None
+ try:
+ existing = self.api.lookup_creator(orcid=raw_record.orcid)
+ except fatcat_client.rest.ApiException as err:
+ if err.status != 404:
+ raise err
+
+ # eventually we'll want to support "updates", but for now just skip if
+ # entity already exists
+ if existing:
+ self.counts['exists'] += 1
+ return False
+
+ return True
- def create_batch(self, batch):
- """Reads and processes in batches (not API-call-per-line)"""
- objects = [self.parse_orcid_dict(json.loads(l))
- for l in batch if l != None]
- objects = [o for o in objects if o != None]
- self.api.create_creator_batch(objects, autoaccept=True)
- self.counts['insert'] += len(objects)
+ def insert_batch(self, batch):
+ self.api.create_creator_batch(batch,
+ autoaccept=True,
+ description=self.editgroup_description,
+ extra=json.dumps(self.editgroup_extra))