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| author | Martin Czygan <martin.czygan@gmail.com> | 2021-10-15 21:56:52 +0200 |
|---|---|---|
| committer | Martin Czygan <martin.czygan@gmail.com> | 2021-10-15 22:04:04 +0200 |
| commit | 1b4136d415cbe549c735d459cd0ab1345bb37011 (patch) | |
| tree | e2630189ca57d5b54c4ec21fdc5008e553aca5e6 | |
| parent | 4be667616ae209fa0efaaa2350c1b75eacf0e344 (diff) | |
| download | fatcat-1b4136d415cbe549c735d459cd0ab1345bb37011.tar.gz fatcat-1b4136d415cbe549c735d459cd0ab1345bb37011.zip | |
pubmed: switch default http site to retrieve update files
Proxy started to throw: "dial tcp: lookup ftp.ncbi.nlm.nih.gov on
[::1]:53: read udp [::1]:45178->[::1]:53: read: connection refused"
NIH has a http version on it's own, try to use that.
| -rw-r--r-- | python/fatcat_tools/harvest/pubmed.py | 6 |
1 files changed, 4 insertions, 2 deletions
diff --git a/python/fatcat_tools/harvest/pubmed.py b/python/fatcat_tools/harvest/pubmed.py index 579dd505..92798a99 100644 --- a/python/fatcat_tools/harvest/pubmed.py +++ b/python/fatcat_tools/harvest/pubmed.py @@ -263,10 +263,12 @@ def ftpretr(url, max_retries=10, retry_delay=1, proxy_hostport=None): return f.name -def ftpretr_via_http_proxy(url, proxy_hostport="159.69.240.245:15201", max_retries=10, retry_delay=1): +def ftpretr_via_http_proxy(url, proxy_hostport="ftp.ncbi.nlm.nih.gov", max_retries=10, retry_delay=1): """ Fetch file from FTP via external HTTP proxy, e.g. ftp.host.com:/a/b/c would - be retrievable via proxy.com/a/b/c. + be retrievable via proxy.com/a/b/c; (in 09/2021 we used + "159.69.240.245:15201" as proxy_hostport but that started to fail + 2021-10-15; just switch to NIH's http version). """ parsed = urlparse(url) server, path = parsed.netloc, parsed.path |