From 460843e31ebea16fcb543b8448365cfe004103b0 Mon Sep 17 00:00:00 2001 From: Bryan Newbold Date: Tue, 24 Dec 2019 16:39:14 -0800 Subject: start work on persist workers and tool --- python/persist_tool.py | 98 ++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 98 insertions(+) create mode 100755 python/persist_tool.py (limited to 'python/persist_tool.py') diff --git a/python/persist_tool.py b/python/persist_tool.py new file mode 100755 index 0000000..d65fa53 --- /dev/null +++ b/python/persist_tool.py @@ -0,0 +1,98 @@ +#!/usr/bin/env python3 + +""" +Commands for backfilling content from bulk files into postgresql and minio. + +Normally this is done by workers (in sandcrawler_worker.py) consuming from +Kafka feeds, but sometimes we have bulk processing output we want to backfill. +""" + +import sys +import argparse +import datetime +import raven + +from sandcrawler import * +from sandcrawler.persist import * + + +def run_cdx(args): + worker = PersistCdxWorker( + db_url=args.db_url, + ) + filter_mimetypes = ['application/pdf'] + if args.no_mimetype_filter: + filter_mimetypes = None + pusher = CdxLinePusher( + worker, + args.cdx_file, + filter_http_statuses=[200], + filter_mimetypes=filter_mimetypes, + #allow_octet_stream + batch_size=200, + ) + pusher.run() + +def run_grobid(args): + worker = PersistGrobidWorker( + db_url=args.db_url, + ) + pusher = JsonLinePusher( + worker, + args.json_file, + batch_size=50, + ) + pusher.run() + +def run_ingest_file_result(args): + worker = PersistIngestFileResultWorker( + db_url=args.db_url, + ) + pusher = JsonLinePusher( + worker, + args.json_file, + batch_size=200, + ) + pusher.run() + +def main(): + parser = argparse.ArgumentParser( + formatter_class=argparse.ArgumentDefaultsHelpFormatter) + parser.add_argument('--db-url', + help="postgresql database connection string", + default="postgres:///sandcrawler") + subparsers = parser.add_subparsers() + + sub_cdx = subparsers.add_parser('cdx', + help="backfill a CDX file into postgresql cdx table") + sub_cdx.set_defaults(func=run_cdx) + sub_cdx.add_argument('cdx_file', + help="CDX file to import from (or '-' for stdin)", + type=argparse.FileType('r')) + sub_cdx.add_argument('--no-mimetype-filter', + action='store_true', + help="ignore mimetype filtering; insert all content types (eg, assuming pre-filtered)") + + sub_grobid = subparsers.add_parser('grobid', + help="backfill a grobid JSON ('pg') dump into postgresql and minio") + sub_grobid.set_defaults(func=run_grobid) + sub_grobid.add_argument('json_file', + help="grobid file to import from (or '-' for stdin)", + type=argparse.FileType('r')) + + sub_ingest_file_result = subparsers.add_parser('ingest-file-result', + help="backfill a ingest_file_result JSON dump into postgresql") + sub_ingest_file_result.set_defaults(func=run_ingest_file_result) + sub_ingest_file_result.add_argument('json_file', + help="ingest_file_result file to import from (or '-' for stdin)", + type=argparse.FileType('r')) + + args = parser.parse_args() + if not args.__dict__.get("func"): + print("Tell me what to do!", file=sys.stderr) + sys.exit(-1) + + args.func(args) + +if __name__ == '__main__': + main() -- cgit v1.2.3